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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95657_evm0 >transcript:BL95657_evm0-protein ID=transcript:BL95657_evm0-protein|Name=transcript:BL95657_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=259bp
MRKENYQLSYGSKVPDSTLCESGTDVRVLGIGSGSGEVDSAMLKRLLQRH
SSVYSRVVEPSGEMIEKYKTLVREDTSLSAVKFDWRQQTTEEYFQTKENT
KFHLIHAINVLYYVEDPVATLRNMWEQLADGGYMLVTMESENGDWGKLQL
KLWEDFGQGDRLNTSLRMAGDVRRWLDAMGATYVSFQNKVNVNATECFEK
NSEEGMLLLDFITHTPYTSDIPEIQAMALEFIRRHSSVVDDRIIFLSVEE
TIVAFKKAT Run BLAST on NCBI mRNA from alignment at Sc0000086:55437..62168- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95657_evm0 ID=transcript:BL95657_evm0|Name=transcript:BL95657_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=6732bp|location=Sequence derived from alignment at Sc0000086:55437..62168- (Branchiostoma lanceolatum)
ATGAGGAAAGAGAACTACCAGCTGTCTTATGGATCAAAGGTTCCCGACTC
AACCCTGTGTGAGTCGGGAACCGACGTACGTGTGCTGGGGATAGGGAGTG
GGTCAGGTTAGACCGCCATGTTGACCTTGCTTGTGACGTCAATACCATTC
TGGAAAAGGCTGCCGTTTTATTCACGTCACAACTCTGTATGTGACATTCT
CAAAAAGGCTGTTTGAAAGTTATTAACTCGGCCAAATTTGCGAGGCTAGC
ACAACTGTATCAATAGCTATCTGGTTTATCTATGTGCAGTGTGAACTAGT
ATAAAATGTCTTGGGTCGGAGCCAGTGTGTGAACCATTTATTGCATGGCA
GTGGGGTGGGGCTGCAAATGATTATTTTGTATTCGCTAATCCGGCCGCAC
ATTTGAGAATTCAAGGCCCGAAACCTGCAAAGAAGATCATTGCAGTAGAT
GATAAAAAACCTGATTTTGTTCTCTTTACAGGTGAAGTTGATAGCGCTAT
GTTGAAAAGGCTTCTACAGCGTCACAGCAGTGTGTACAGCAGGGTCGTGG
AACCGTCGGGAGAAATGATCGAAAAATACAAGGTGGCTCTTTCGCACCAT
CATTTTCTTGCTTGCTTGCTTATGCTCCGATCAATATTGCAAAGTAACAG
CTACTCATGCAACTGGATAAAATTTGGAAACGATCAGTACAATGTCATAG
CTCTACCAATGACAACATGGTACCCTGACGTACGCTCTTTTAAAAGATAC
TAATTCTGTGAAATATCCTTCTTTTAATTTTGTGCCTCCACGGCGACGTT
CATCCAAATTTATATATTGATGGATCTTCATGATTTTGCTGTTTTATTGC
GCATGTTATGACCTGGATGTCTAACCGTCATCGACATTCCATGATAGGAC
TATCAAACATATGACATACGTCACTGGGAAAGAGGGGAATATCGATAAAT
ATAATTTAAGCAAATGAAGACTTAATTTGAACAAGAGTCCGTAGGACACA
ATTCTCCGTGAAGTATTTATAGTATGTACAAGTATTGACCCACACAAATT
GCATCTCTGCTCAGTCCAAGTAGTGTTTTAGAGCAAGTAAAGAAAAAGTG
TTTGTTTATCTTTTTCTTTCAATACAGGAGTGGTCAACCTGCTGAAAAGT
ATGTTTTTACAGCATGGCACAGATGGGATCTAGAAATTCCGGGAAAAGTC
ACAAAGTTAGATCTAGATGGCCTCTTTCAATTATCAACGAACCATTCAGC
CTTACAACTAAGATGTATCAGAAATCACAAATATGTAGTAAATCCTCTTT
CCGCAATTTATTGTAGGCCAACCTGATCTATAGCTATCAAGCTATTTGCA
ATAAAAAAGGCTAATTTATATTATCGTAACATTTCACGAAGGTCAAAGGT
CACCGGATCTAACCACCCGGAAGTGACACTGGCGCGCGCACTTTTCTGAG
AGATATTTCTCAACAATCTTTCATCCCCTGTGTAAACTTTTTACATTGTC
ACAGCCTCCGTATTATAAACTACAAGTGTGGTAAGTTTGAAGGTCCAGAG
ATTTGCCATTTTCACACTGTGCGTAAAAATGCATCGTCCGTCCCGTGCGC
ACATACTGTATGCGAGTTGCGAGTGGACACGGCATACTTAATACACAGAC
TGGAGGTCACTCTGCACATGTTCGCAGCTAAAACTCACAATTCCCGTTGC
CGCATTGGTATGTAACTTGGTATATCGTTTGCTAGGTTGCGTGTGGTGAT
GCACGTTGTCTATTTTTCAATGTAACAGTGACTATACGATCACAGCAAGT
AAGGAAGATTTATACCCCGTATCTGCCTGAAGTATTCCAGTCATGCATAA
CGGATTATAACATGGTCCCTATGGCAGGGCAGTGGGACATAGCATTAATT
ATAGGGGTGCAATTACGATATTGGATTGACGTTTAAAGTAGTTATGGTGT
CACAAAGCTATTGTGCATCCCCACGCCGAACCAGGCAAACGATATGCTAA
GTTACACACCGATGCGACGACGGGATCGTGAGTAATAGCTGCGAACGCGC
AAACAAATGCATTCCCAATACTCCCAGAAGGAGGTCATCCTCCTTCCCGG
AGTAATGATTTATGAGAAAATGCTATATGGTGCCATATTGGTAAATGGCG
GGAATTAGGTACTTACATCAGTCAGTAAATTCAATATTATTTGGCGAAGG
TATGAGGTCCTGGAACTCTATTCAATTCATCAGCATACGACCTTGTATTG
ACTCTGTCTTCTATTGCACCATGTCAGAATTGTCGTCATGTCATGCATAT
GACTCATTGACCCATCAATCTCAGAGATTTGCTCTCAGACCTGGTAACTC
CAGTCCAGTTAGTAGTCCAGTCACTGACGAAAGACAGCAGATGATGGAGA
TCGAAGGGTAGAGCTGACCCGGTCGACGCCGCCGTGCTTGGCTAGACGCT
AACGCTTCGCTTTATCCTGAGGACGACCGCTTAGGTTTTTCATACGGTTA
CGTTGTTGAAAAATGTGCCATTAACATTGATATAACGGTAAATCCTATAT
AGACACTGGTGCGTGAAGACGCAAGTCTCGGTGCTGTGAAGTTTGACTGG
CGCCAGCAGACAGCGGAAGAGTTACGCTCAGTACTTCCAGACGAAGGAGG
ACACGAAGTTCCACCTGGTCCATGCAGTCCACGTTCTGTACTATGTGGAA
GATCCAGTCGCCACCTTGCGGAACACGTGGGAACAGCTTGCAGATGGCGG
TTGCATGTTAGTCGCCATGGAGTCAGGTACGGCATTTTTCCACACCCACG
GTCCCTATATAACTTGCATATTGAGAAATAATCACAATATAATGAAGTCA
TGTCGTAACGTTAATCAAACGCAACAGATGTTTCGCTCACAAAGATTTTC
TTGATAAGGCCATTACACAGAGTATGATATACCAAAAATAGGTTCTTCTT
ATTTGTTCTTATAAAACTTTGACTTTGGAATTGATTTTGGCATTCTACGA
CATTAGCATCGTTTTCCAATATTTTCCACAATTTACGGCATATATTTGAT
CAGTTTGCAGCTGCTTTGTATGATTTACAGTATGGTGGAAAACGTTTTTA
TTTATTTCTGGAATCGGACAAAAATTGATGCGTGCGCGGATGTCATCCAT
ATAATCAAATCAAGTCTAATAGTAAAAAAAAATCTTCTTGATACACTTAC
TTGCACCTGAACTTACTACTTACACTGTTCCTGTTACACATTTGCAGATA
AGAGTGATTGGGGGAAACTGCAGTACAAGTTGTGGGATGATTTCGGCCAA
GGTGACCGTTTGAAAACGTCATTTCGCACGTCCGGTGACGTCAAACGATG
GTTTGACACAGCAGGTATCAGTTACGTCACTTCGGAGGATGAAATCAGCG
TCAACATCACAGAGTGTTTTAAGGATGACTCAGAGTCAGGAATGATGATT
CTCGAGTTTTTGACGAAAACACCTTACGTGTCAAGTGAGCCGGAAATAAA
ATCAATAACTTTAGAATACATTCGATGCAACTCGTCGGTTGTCGACGATA
AGGTGATCTTTAAAATGACCAATGAAGTTCTCATCGCGTTCAAAAAGAAG
TAACAATGCTGTTGCTGTACCCCCACCAGTATACCACTGCATGTTAACAT
ATTTTGTAGTGCTGATAGTTTACAAATCGCAAGGTGGGGTTGTTAAATTC
TTTAGCCTGACGCAGCTGTACTTGCCACTTTTGAATATGTTATCACAGTC
ACGTTATCATTTTATCATACAAATGGAAATTCATAGGTCTGACTCTTCCT
GGTAAGCGTTAACAAAACCAGCATGTGATATCACGATCAAACCCCGTCTG
ACTACTGATTTCGGTGACCTGTACTTTAATAGCCCCTGAGAGCAAAAATG
CACAACAAGGATCGGATCTTCATTGATTATTCATTTTCACAATAGCCATG
TCGGCAAGTCATCTAGATGTAACGCCGGTCTGCCTCTGTGAATACTAACG
GTTGCAGTTTGTGGACGATTGTCTTCGCTGAATTCATTGAAGGGCTTTAT
TTACATTGGTAATCACCGTGAGAAGTGTACCCTCCCCAGGTCCTTCGCTT
TTGGTTGCTGACTGTACAGCTATTGTATTACCTCTTGAAATGTGCAGCAC
TTTATATGTGAACATCTGTTTTGGATCTTTACAAATAGGCACTGTGAAAT
TGGTTTGACCTGGATGACCTGTAGACCACATTATTGTCGGCGCTGGGCAC
TTTTAGCTATGAGGGCGTTGACCCGGGTTACTTCTCCTGTGTACATGCCA
AACCAAAGTACTGAATACATGTAACGTTAGGTCTCAAAACATCACTCAAC
TGTATGTTCGTCATGTCGTTAATATATACGTTTAAACTTCCTGTCGCGAG
TATGGATAATAACATGTAGTAGACGACAACGGAAGACCTTTGCTGAATTG
CTAATCTTTAACAATTTGAAGCACGTGACCCGTCGATTGTCCGGCTGACT
GACCTCTGCCGGAATAATGACTGAACACTGACGAAAGGTCAGACACTGCA
AACTTGGTCTCAGCACCGAGGAACATCGCCATGGCAGGTTTGTACATTTT
GCAGATACCTAAAGACTTTGTCCCTCTTGTATTACCTGAATCGTGTCGTT
TGCGGAACCAAGGGATTAGACACCGTCATGCAGTATTTTCACATGGGTAA
ACAAATGCATGTGTAATTGGTTTCTTATCTACGCTTGCTACCAAAATGAT
TTTCCTTGCCTTACCCGGTTTCTGCTACCTTCCTTGGCGGCTCAGCCCTG
AGGAATGTNACCTTCCTCGGCCCTATCCCGAGAAATATAGCCGAGGCGGG
TTACCGAAACGTCACATAGGTAGTATAGATGAAAATCCAATATATAAGGA
TTCATACTATAGTTAATGGCCACACGGTGCCATGGAATGTTTGCTTATGA
ATATCGACAGGACTACTGTGAAGGTATGTTAACATGAGTCGGCCTTGCAC
CCCATGTCGACAGGAAGGTTAAAGGTCGGCAGGCTGAACAACGACTCTCC
CGCGCGCTATGCGGCAAGTTTCACGTCTTTCCTGGACGCCACTGAGATGA
GCAAAGAGAGCTACTACCACTCGTATGAATCGAAGGTTCCAGACTCTACT
CTGTGTGAAGCGGGAACCGAAGTACGTGTGCTGGGGATAGGGAGTGGATC
AGGTGAGATGTCGCACAAAATCCGCATCTCATCTTCGGTTTAGCAAGGCC
AGCCCACATTCAAACATCAACAATATAGCTTGAGCTATCTTGTATAAACA
TGAAAATAGACTCAGACGGTACCGGATACACAATCTTTTCACCCGGAAGG
CTTAGTGTTCTGAGGGTAGGGCAGAGGAAGCACTTGTAAACGAGATCTGT
ATCTGCATTGTTGTCTCAGCCAGTATAACCGGCCTTTGGCGCAACATACT
TTCAGAGATATCAAACAGAGGTAGATTGTGTAGGCTTAAGCTTGTATGGT
TCACTCAGGATCATTGCCCATCCTTTGTGAGCAGACTGACTATCACAAAG
TACTTACTTACGGCAAAAGCATTGTGCTCTCTCAGGCGAAGCTGACAGCA
TCATCACAAAGAAGCTTCTACAACACCACAACGGTGTGTACAACAGGGTT
GTGGAACCGTCGGGAGAAATAATTGAAAAATACAAGGTGGTTATAATCAT
TACTTTATTGTGTAGTGTAATATAATATCTTGCTTTTGCCACGTGCTCAG
GTTGTTTTGATCGTACTTGTTTTTGTCATTGTTTTATTCAACCATCGTTT
GCTCTTGTCATTGGTATCCTGTAGACGCTGGTGCGTGAAGACACGAGTCT
CAGTGCGGTCAAGTTTGACTGGCGCCAGCAGACAACGGAAGAGTACTTCC
AGACGAAAGAAAACACAAAGTTCCATCTCATTCATGCCATCAACGTTCTG
TACTATGTGGAAGATCCAGTTGCCACCTTGCGGAACATGTGGGAACAGCT
GGCAGATGGTGGTTACATGTTAGTCACTATGGAGTCAGGTATAGTACAGT
ACATGTATCATTCCGGTTTTAATGTTCTGACTTTATGTTATTAAACTTTG
GGACATATTCTCCATGAGTACAAACTGTGTCCTTAAGATCTATTTGAAGG
AAACCAAGAAGTCCCAAACTGGTTGAAGTACTGGCACGACAATATGTGAT
AAGGATGATGATTCCGATGTTGAAGGAAAACCCACCGAAATATCTTCTGT
ACTCGTTTCCATTGATGCATTGCTGGCTGCTATCCATTATATCATATCAA
CCAACACGTTCTTGTTAATTATAAACAATAAATGATATTCCCGGCTCTGA
TTGGCCTCGTTATACATTTACAGAAAACGGGGATTGGGGCAAGCTCCAGC
TCAAGTTGTGGGAGGATTTCGGCCAAGGCGACCGCTTGAACACATCGCTC
CGTATGGCCGGTGACGTCAGAAGATGGCTTGACGCAATGGGCGCCACGTA
CGTCTCTTTCCAGAACAAAGTCAACGTCAACGCCACGGAGTGTTTTGAGA
AAAACTCAGAGGAGGGAATGCTGCTTCTTGACTTCATCACACACACACCT
TACACCTCCGATATACCAGAAATACAAGCAATGGCCTTAGAGTTCATCCG
ACGACATTCCTCTGTGGTAGATGATAGGATAATTTTCCTATCAGTCGAAG
AAACTATCGTTGCTTTTAAAAAGGCAACATAA Coding sequence (CDS) from alignment at Sc0000086:55437..62168- >transcript:BL95657_evm0 ID=transcript:BL95657_evm0|Name=transcript:BL95657_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3120bp|location=Sequence derived from alignment at Sc0000086:55437..62168- (Branchiostoma lanceolatum)
ATGAGGAAAGAGAACTACCAGCTGTCTTATGGATCAAAGGTTCCCGACTC
AACCCTGTGTGAGTCGGGAACCGACGTACGTGTGCTGGGGATAGGGAGTG
GGTCAGGTGAAGTTGATAGCGCTATGTTGAAAAGGCTTCTACAGCGTCAC
AGCAGTGTGTACAGCAGGGTCGTGGAACCGTCGGGAGAAATGATCGAAAA
ATACAAGACGCTGGTGCGTGAAGACACGAGTCTCAGTGCGGTCAAGTTTG
ACTGGCGCCAGCAGACAACGGAAGAGTACTTCCAGACGAAAGAAAACACA
AAGTTCCATCTCATTCATGCCATCAACGTTCTGTACTATGTGGAAGATCC
AGTTGCCACCTTGCGGAACATGTGGGAACAGCTGGCAGATGGTGGTTACA
TGTTAGTCACTATGGAGTCAGAAAACGGGGATTGGGGCAAGCTCCAGCTC
AAGTTGTGGGAGGATTTCGGCCAAGGCGACCGCTTGAACACATCGCTCCG
TATGGCCGGTGACGTCAGAAGATGGCTTGACGCAATGGGCGCCACGTACG
TCTCTTTCCAGAACAAAGTCAACGTCAACGCCACGGAGTGTTTTGAGAAA
AACTCAGAGGAGGGAATGCTGCTTCTTGACTTCATCACACACACACCTTA
CACCTCCGATATACCAGAAATACAAGCAATGGCCTTAGAGTTCATCCGAC
GACATTCCTCTGTGGTAGATGATAGGATAATTTTCCTATCAGTCGAAGAA
ACTATCGTTGCTTTTAAAAAGGCAACATAAATGAGGAAAGAGAACTACCA
GCTGTCTTATGGATCAAAGGTTCCCGACTCAACCCTGTGTGAGTCGGGAA
CCGACGTACGTGTGCTGGGGATAGGGAGTGGGTCAGGTGAAGTTGATAGC
GCTATGTTGAAAAGGCTTCTACAGCGTCACAGCAGTGTGTACAGCAGGGT
CGTGGAACCGTCGGGAGAAATGATCGAAAAATACAAGACGCTGGTGCGTG
AAGACACGAGTCTCAGTGCGGTCAAGTTTGACTGGCGCCAGCAGACAACG
GAAGAGTACTTCCAGACGAAAGAAAACACAAAGTTCCATCTCATTCATGC
CATCAACGTTCTGTACTATGTGGAAGATCCAGTTGCCACCTTGCGGAACA
TGTGGGAACAGCTGGCAGATGGTGGTTACATGTTAGTCACTATGGAGTCA
GAAAACGGGGATTGGGGCAAGCTCCAGCTCAAGTTGTGGGAGGATTTCGG
CCAAGGCGACCGCTTGAACACATCGCTCCGTATGGCCGGTGACGTCAGAA
GATGGCTTGACGCAATGGGCGCCACGTACGTCTCTTTCCAGAACAAAGTC
AACGTCAACGCCACGGAGTGTTTTGAGAAAAACTCAGAGGAGGGAATGCT
GCTTCTTGACTTCATCACACACACACCTTACACCTCCGATATACCAGAAA
TACAAGCAATGGCCTTAGAGTTCATCCGACGACATTCCTCTGTGGTAGAT
GATAGGATAATTTTCCTATCAGTCGAAGAAACTATCGTTGCTTTTAAAAA
GGCAACATAAATGAGGAAAGAGAACTACCAGCTGTCTTATGGATCAAAGG
TTCCCGACTCAACCCTGTGTGAGTCGGGAACCGACGTACGTGTGCTGGGG
ATAGGGAGTGGGTCAGGTGAAGTTGATAGCGCTATGTTGAAAAGGCTTCT
ACAGCGTCACAGCAGTGTGTACAGCAGGGTCGTGGAACCGTCGGGAGAAA
TGATCGAAAAATACAAGACGCTGGTGCGTGAAGACACGAGTCTCAGTGCG
GTCAAGTTTGACTGGCGCCAGCAGACAACGGAAGAGTACTTCCAGACGAA
AGAAAACACAAAGTTCCATCTCATTCATGCCATCAACGTTCTGTACTATG
TGGAAGATCCAGTTGCCACCTTGCGGAACATGTGGGAACAGCTGGCAGAT
GGTGGTTACATGTTAGTCACTATGGAGTCAGAAAACGGGGATTGGGGCAA
GCTCCAGCTCAAGTTGTGGGAGGATTTCGGCCAAGGCGACCGCTTGAACA
CATCGCTCCGTATGGCCGGTGACGTCAGAAGATGGCTTGACGCAATGGGC
GCCACGTACGTCTCTTTCCAGAACAAAGTCAACGTCAACGCCACGGAGTG
TTTTGAGAAAAACTCAGAGGAGGGAATGCTGCTTCTTGACTTCATCACAC
ACACACCTTACACCTCCGATATACCAGAAATACAAGCAATGGCCTTAGAG
TTCATCCGACGACATTCCTCTGTGGTAGATGATAGGATAATTTTCCTATC
AGTCGAAGAAACTATCGTTGCTTTTAAAAAGGCAACATAAATGAGGAAAG
AGAACTACCAGCTGTCTTATGGATCAAAGGTTCCCGACTCAACCCTGTGT
GAGTCGGGAACCGACGTACGTGTGCTGGGGATAGGGAGTGGGTCAGGTGA
AGTTGATAGCGCTATGTTGAAAAGGCTTCTACAGCGTCACAGCAGTGTGT
ACAGCAGGGTCGTGGAACCGTCGGGAGAAATGATCGAAAAATACAAGACG
CTGGTGCGTGAAGACACGAGTCTCAGTGCGGTCAAGTTTGACTGGCGCCA
GCAGACAACGGAAGAGTACTTCCAGACGAAAGAAAACACAAAGTTCCATC
TCATTCATGCCATCAACGTTCTGTACTATGTGGAAGATCCAGTTGCCACC
TTGCGGAACATGTGGGAACAGCTGGCAGATGGTGGTTACATGTTAGTCAC
TATGGAGTCAGAAAACGGGGATTGGGGCAAGCTCCAGCTCAAGTTGTGGG
AGGATTTCGGCCAAGGCGACCGCTTGAACACATCGCTCCGTATGGCCGGT
GACGTCAGAAGATGGCTTGACGCAATGGGCGCCACGTACGTCTCTTTCCA
GAACAAAGTCAACGTCAACGCCACGGAGTGTTTTGAGAAAAACTCAGAGG
AGGGAATGCTGCTTCTTGACTTCATCACACACACACCTTACACCTCCGAT
ATACCAGAAATACAAGCAATGGCCTTAGAGTTCATCCGACGACATTCCTC
TGTGGTAGATGATAGGATAATTTTCCTATCAGTCGAAGAAACTATCGTTG
CTTTTAAAAAGGCAACATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:55437..62168 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95657_evm0 |
| Biotype | protein_coding |
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