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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95651_evm0 >transcript:BL95651_evm0-protein ID=transcript:BL95651_evm0-protein|Name=transcript:BL95651_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=400bp
MTTIPQSAEDIALSWVQQVLQRDLPGVTITDVDVKGSINQGEGFLSDIVA
FDAVGTRNGTSQRYSLVAKLTDFKRPQTLMPDFPKDFHMQLDILEVKFYS
ILVPDLLYNVSIQSTERKFQPKGAHCVGYSHADSLFLPKCYYAATDPSSM
VSVRVMENLKTQGFSIKPNLQPLSRDEMMLTVGAFARFHGLSHRLELRLG
KPLAEKYDWIRPDAISPNEQAMEAFTNEFQKCLKKFAAAFPDQTDLVSRL
EKRIRNLKSLFDVTKDPRVKVLSHGDCWANNIMIKYEGDVPVAAKLVDWQ
GIKFHPPTYDLVHLFLCGTDWDVFHNHRDAILAHYHQQLQETLGPRESSG
LQKYTLEQLKADFKADCLYGVCCRIMMLLVLPADQDLLRKVQEIKEWGVL Run BLAST on NCBI mRNA from alignment at Sc0000086:848647..850656+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95651_evm0 ID=transcript:BL95651_evm0|Name=transcript:BL95651_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2010bp|location=Sequence derived from alignment at Sc0000086:848647..850656+ (Branchiostoma lanceolatum)
ATGACCACCATCCCGCAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCA
GCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATG
TGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCT
TTTGATGCTGTGGGGACCAGGAATGGTACAAGTCAGCGCTACAGCCTCGT
CGCTAAACTGACCGATTTCAAGCGCCCGCAGACTTTAATGCCTGACTTTC
CCAAGGATTTTCACATGCAATTAGATATCCTGGAGGTGAAGTTTTACTCC
ATTTTGGTCCCCGATCTTCTTTATAATGTGTCGATCCAAAGCACGGAGCG
GAAATTCCAGCCAAAAGGTGCACATTGCGTTGGTTACTCCCATGCCGATT
CCTTGTTCCTCCCCAAATGCTACTACGCCGCCACCGACCCAAGCTCCATG
GTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCCATAAA
ACCTAACCTCCAACCACTGAGCCGTGATGAGATGATGCTGACGGTCGGGG
CCTTCGCTCGGTTCCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGC
AAACCCCTTGCCGAGAAGTACGACTGGATTCGGCCCGATGCCATTTCACC
AAATGAGCAAGCGATGGAAGCCTTCACCAACGAATTTCAGAAGTGTTTGA
AGAAATTCGCAGCGGCTTTCCCTGATCAGACAGACCTTGTATCTCGTCTG
GAGAAGAGAATTCGAAACCTCAAGTCCTTGTTTGATGTTACGAAGGACCC
GAGGGTCAAGGTGCTTAGCCACGGAGATTGCTGGGCCAACAACATCATGA
TCAAGGTAGATGATATACTGTCGTTTTCTCAAATTCGAATGTGGTAGTGG
ACGTTAAATTCAAAATTTCGTGTCAATACTTCTAGACTGTCGCTCAAGCT
TCAAGAGAATAGGGATTAACAGAAGTCTTGGCCGTAATTATAAATATAAC
TTTCACCTTTAGCCGTCATCAGAAAGAATAACCATTTCGGAAAAGGTAGG
AAAACGCACGGATACGTGACTTCAGTAATAGGTCAAAGCTGTCAGAAAGC
CTCTATCGACCCCCGTCTTTGTTGAGCCATAACGTGTTCTGCCCCTTTCA
CTGCCATTGCAAATAGTACGAAGGTGACGTCCCCGTTGCTGCAAAGCTGG
TGGACTGGCAGGGGATTAAGTTCCACCCGCCGACCTATGACCTGGTCCAT
CTGTTCCTTTGTGGTACGGATTGGGACGTCTTCCACAACCACAGGGACGC
CATCCTGGCTCACTATCACCAGCAGCTGCAGGAGACTCTGGGTCCTCGCG
GTAAGAACCCATCTTCTTCGGCATGAAAATGCATCTGAACAGAGCACTAT
TGCAAGCATACTGTTCCGATGTAAAGGAATAAAGTATCCACAATAGACGT
TATTTTTCCACCATCTTTAATTAGGTTACTCCTACACACGCTAATTTCTT
GGTTCTTGATTCGCCACGATCTCAAATAAAAGTCAACTTATAGAATGCAG
GGTACACATCAACCCCAAAACGCTCATATTTTGACAGAAACAGCTGAGTT
TTCCATAGATCAACGCAACTTTTTTATTTATTGAAAGTTGCTTGAGAAGC
ATGGTGTGTTGACTTAATTGATGGCATCTTTATCTTTATTCCACCTACTT
AGCAAGTTTCCTTCTTTTGGTGCAGGAATCCGAGGACCAATTAATTGGTG
AGGCCTTGGCGACTTTATTTTCATCAATGATCTCACACACTCATCACTGT
ATTCTAACTATGCAATTTATCAGATACACATGGCATATTTCTCTAGAGTC
GTCGGGCCTACAGAAGTACACACTGGAGCAGTTGAAGGCAGACTTCAAAG
CCGACTGTCTGTACGGGGTCTGCTGCCGCATCATGATGTTGTTAGTCCTG
CCTGCCGACCAGGATCTACTGCGGAAGGTCCAGGAGATCAAGGAGTGGGG
AGTTCTATAA Coding sequence (CDS) from alignment at Sc0000086:848647..850656+ >transcript:BL95651_evm0 ID=transcript:BL95651_evm0|Name=transcript:BL95651_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3609bp|location=Sequence derived from alignment at Sc0000086:848647..850656+ (Branchiostoma lanceolatum)
ATGACCACCATCCCGCAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCA
GCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATG
TGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCT
TTTGATGCTGTGGGGACCAGGAATGGTACAAGTCAGCGCTACAGCCTCGT
CGCTAAACTGACCGATTTCAAGCGCCCGCAGACTTTAATGCCTGACTTTC
CCAAGGATTTTCACATGCAATTAGATATCCTGGAGGTGAAGTTTTACTCC
ATTTTGGTCCCCGATCTTCTTTATAATGTGTCGATCCAAAGCACGGAGCG
GAAATTCCAGCCAAAAGGTGCACATTGCGTTGGTTACTCCCATGCCGATT
CCTTGTTCCTCCCCAAATGCTACTACGCCGCCACCGACCCAAGCTCCATG
GTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCCATAAA
ACCTAACCTCCAACCACTGAGCCGTGATGAGATGATGCTGACGGTCGGGG
CCTTCGCTCGGTTCCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGC
AAACCCCTTGCCGAGAAGTACGACTGGATTCGGCCCGATGCCATTTCACC
AAATGAGCAAGCGATGGAAGCCTTCACCAACGAATTTCAGAAGTGTTTGA
AGAAATTCGCAGCGGCTTTCCCTGATCAGACAGACCTTGTATCTCGTCTG
GAGAAGAGAATTCGAAACCTCAAGTCCTTGTTTGATGTTACGAAGGACCC
GAGGGTCAAGGTGCTTAGCCACGGAGATTGCTGGGCCAACAACATCATGA
TCAAGTACGAAGGTGACGTCCCCGTTGCTGCAAAGCTGGTGGACTGGCAG
GGGATTAAGTTCCACCCGCCGACCTATGACCTGGTCCATCTGTTCCTTTG
TGGTACGGATTGGGACGTCTTCCACAACCACAGGGACGCCATCCTGGCTC
ACTATCACCAGCAGCTGCAGGAGACTCTGGGTCCTCGCGAGTCGTCGGGC
CTACAGAAGTACACACTGGAGCAGTTGAAGGCAGACTTCAAAGCCGACTG
TCTGTACGGGGTCTGCTGCCGCATCATGATGTTGTTAGTCCTGCCTGCCG
ACCAGGATCTACTGCGGAAGGTCCAGGAGATCAAGGAGTGGGGAGTTCTA
TAAATGACCACCATCCCGCAATCTGCTGAAGACATCGCCCTCTCCTGGGT
GCAGCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCG
ATGTGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTC
GCTTTTGATGCTGTGGGGACCAGGAATGGTACAAGTCAGCGCTACAGCCT
CGTCGCTAAACTGACCGATTTCAAGCGCCCGCAGACTTTAATGCCTGACT
TTCCCAAGGATTTTCACATGCAATTAGATATCCTGGAGGTGAAGTTTTAC
TCCATTTTGGTCCCCGATCTTCTTTATAATGTGTCGATCCAAAGCACGGA
GCGGAAATTCCAGCCAAAAGGTGCACATTGCGTTGGTTACTCCCATGCCG
ATTCCTTGTTCCTCCCCAAATGCTACTACGCCGCCACCGACCCAAGCTCC
ATGGTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCCAT
AAAACCTAACCTCCAACCACTGAGCCGTGATGAGATGATGCTGACGGTCG
GGGCCTTCGCTCGGTTCCACGGCCTGTCACATCGACTAGAGCTCCGTTTG
GGCAAACCCCTTGCCGAGAAGTACGACTGGATTCGGCCCGATGCCATTTC
ACCAAATGAGCAAGCGATGGAAGCCTTCACCAACGAATTTCAGAAGTGTT
TGAAGAAATTCGCAGCGGCTTTCCCTGATCAGACAGACCTTGTATCTCGT
CTGGAGAAGAGAATTCGAAACCTCAAGTCCTTGTTTGATGTTACGAAGGA
CCCGAGGGTCAAGGTGCTTAGCCACGGAGATTGCTGGGCCAACAACATCA
TGATCAAGTACGAAGGTGACGTCCCCGTTGCTGCAAAGCTGGTGGACTGG
CAGGGGATTAAGTTCCACCCGCCGACCTATGACCTGGTCCATCTGTTCCT
TTGTGGTACGGATTGGGACGTCTTCCACAACCACAGGGACGCCATCCTGG
CTCACTATCACCAGCAGCTGCAGGAGACTCTGGGTCCTCGCGAGTCGTCG
GGCCTACAGAAGTACACACTGGAGCAGTTGAAGGCAGACTTCAAAGCCGA
CTGTCTGTACGGGGTCTGCTGCCGCATCATGATGTTGTTAGTCCTGCCTG
CCGACCAGGATCTACTGCGGAAGGTCCAGGAGATCAAGGAGTGGGGAGTT
CTATAAATGACCACCATCCCGCAATCTGCTGAAGACATCGCCCTCTCCTG
GGTGCAGCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACG
TCGATGTGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATC
GTCGCTTTTGATGCTGTGGGGACCAGGAATGGTACAAGTCAGCGCTACAG
CCTCGTCGCTAAACTGACCGATTTCAAGCGCCCGCAGACTTTAATGCCTG
ACTTTCCCAAGGATTTTCACATGCAATTAGATATCCTGGAGGTGAAGTTT
TACTCCATTTTGGTCCCCGATCTTCTTTATAATGTGTCGATCCAAAGCAC
GGAGCGGAAATTCCAGCCAAAAGGTGCACATTGCGTTGGTTACTCCCATG
CCGATTCCTTGTTCCTCCCCAAATGCTACTACGCCGCCACCGACCCAAGC
TCCATGGTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTC
CATAAAACCTAACCTCCAACCACTGAGCCGTGATGAGATGATGCTGACGG
TCGGGGCCTTCGCTCGGTTCCACGGCCTGTCACATCGACTAGAGCTCCGT
TTGGGCAAACCCCTTGCCGAGAAGTACGACTGGATTCGGCCCGATGCCAT
TTCACCAAATGAGCAAGCGATGGAAGCCTTCACCAACGAATTTCAGAAGT
GTTTGAAGAAATTCGCAGCGGCTTTCCCTGATCAGACAGACCTTGTATCT
CGTCTGGAGAAGAGAATTCGAAACCTCAAGTCCTTGTTTGATGTTACGAA
GGACCCGAGGGTCAAGGTGCTTAGCCACGGAGATTGCTGGGCCAACAACA
TCATGATCAAGTACGAAGGTGACGTCCCCGTTGCTGCAAAGCTGGTGGAC
TGGCAGGGGATTAAGTTCCACCCGCCGACCTATGACCTGGTCCATCTGTT
CCTTTGTGGTACGGATTGGGACGTCTTCCACAACCACAGGGACGCCATCC
TGGCTCACTATCACCAGCAGCTGCAGGAGACTCTGGGTCCTCGCGAGTCG
TCGGGCCTACAGAAGTACACACTGGAGCAGTTGAAGGCAGACTTCAAAGC
CGACTGTCTGTACGGGGTCTGCTGCCGCATCATGATGTTGTTAGTCCTGC
CTGCCGACCAGGATCTACTGCGGAAGGTCCAGGAGATCAAGGAGTGGGGA
GTTCTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:848647..850656 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95651_evm0 |
| Biotype | protein_coding |
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