|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95650_evm1 >transcript:BL95650_evm1-protein ID=transcript:BL95650_evm1-protein|Name=transcript:BL95650_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=275bp
MIMARGPRAFNVFCAALQRCGYPGLAAKLLRPIATKTELKVPSVRLKDQQ
SSMASMSSSVKDLSLGESTISPGISSSLYAPSTIGRLPMVNDYVAKSYDD
KGIEAQHKLALQRHRLTIIRHLDVRDIRDYMLKNHAIKEADMAAILTQLT
RQDEATKLVDILSQRPEHGFPIFCKALQKYGYPALARQLTRPTHLPSVRA
RPVRGLPPRGRHYGTLPPWGNRKKVNMGARAMPFQTNLGKRRGGGSITLG
RLPPIDKTSSSWETLTSTDVMDMSH Run BLAST on NCBI mRNA from alignment at Sc0000086:708641..711312+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95650_evm1 ID=transcript:BL95650_evm1|Name=transcript:BL95650_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2672bp|location=Sequence derived from alignment at Sc0000086:708641..711312+ (Branchiostoma lanceolatum)
ATGATCATGGCGAGAGGACCCCGGGCCTTCAACGTCTTCTGTGCCGCTTT
ACAACGGTGTGGATACCCGGGACTCGCGGCCAAACTGCTCAGGCCTATCG
CCACCAAGACAGGTAACTTGTGTTATATCTTATCTATTTGAACATTGTAA
ACACTTCCATCTAATTTTGCATAGCTCATAACATTGGAAAGCCGCGTTGT
GTTCACAGCGTTTATCAGGGTTACATTGCGATGACTTGTCGTCATGGTGC
ATGTATGTTGCAGACTCAAGTACTTGCTAGTTATTAGTTTCCGTTCCACA
AAAGTATGTACATAGTGACCTAGTACCTATCTACAGTATTTGCGACCAGA
AATATCATTCAACACCTTTCCTAACAACACGCACGACTTTTTTCACCCCA
CAGAGCTGAAGGTACCATCCGTCCGTCTAAAGGACCAGCAGTCTTCCATG
GCTTCCATGTCCAGTTCTGTAAAGGACCTGTCTCTGGGCGAGTCGACTAT
TTCCCCGGGGATTTCCAGCAGTCTCTACGCTCCTAGCACCATCGGACGTC
TCCCCATGGTTAACGACTACGTCGCCAAGTCGTACGACGACAAAGGTTTG
TGTTTATATAACATATTGTGATCTCGTGTGTGCTGTGTGGGGACTGAGCA
AAAACCTAAATACTAATACCTAAGTTTCTGCCGAATTGTTCAGGCCAGAT
ACTATGCCCTTCTATCTCTTCCCAAGCAGTACGGACCTTAGCCGCTGTTT
AAGCATCTTCTATGTCAAGTTTTACATTCTGCTCACTAATTTACTGACTT
CAAGGTAGAAACAATTGTTCTATTAGTAAAAAATGAATAGTATGCATTTT
TCTAATTCTTGGTTTATCCCAATTTTTCAACAAATTATGTGGATACATCA
TCATACACTTTTGTTTAACTTTGATTTTTATATGGATTGATGTTAACATA
GTAAATACAACACGTTACTTACTTTATGTTTTATCAACCTGTATTTGTAG
GTATCGAGGCTCAACACAAGCTGGCACTGCAGCGTCACCGCCTGACTATC
ATCCGTCACCTGGACGTGCGCGACATCCGGGACTACATGCTGAAGAACCA
CGCCATCAAGGAGGCGGACATGGCCGCCATCCTGACTCAGCTCACCCGAC
AGGACGAAGCAACCAAACTGGTGGACATCCTGAGCCAGAGGTGTGGATCT
TTACTCGGTGTTCTGTCTTAGTCTACACAGGAAAAATCCACTGGTTTCGA
AAACCTTCTTTGACAATTTTGACTCTGAAGTGGTTACTGAAAATTACAAT
GAATTTGGTCTGAATCATGGCGCAATATAGAGCACCAAGTTCAAGGCAGT
AGTTTAGGGAATATCTACGAAGGACGACAACGACAAATTTCCAGTGCGTT
GCTGACGAAATATTCTTGCCCTCAGACGAGGAAATGATTTGCGCAGGTGG
GAAAATTTGTGTTATGGTCCTTCGGAAATATGACCACTTCAAAATTACAC
CACGATGCTTCTAACTACTGCACGTCGCGACGTCAGTTCTTAGGTATCGT
TTTCTGAAATGTTCACAATTGAACAGGTTGGGACCTCTTTATTGTTTTAT
AGCTGAGTTTAATGTTATTTCTATTACCCACAGGCCCGAACATGGCTTCC
CGATATTCTGCAAAGCACTCCAGAAGTACGGATACCCGGCTTTAGCAAGA
CAGCTGACAAGACCAACCCATCTGCCATCAGGTAAGAAGGAAGAGAACGA
ACTCTGCTGTGTTGTACACGTGTTACCTCAAGTCTCTATTCAAAAGCACG
CAGAGGGAAGATATTCCGTTTCCTTGTTGTCATGGTATCATTAAAAATTT
GCACCGCTAAGTTTCGCGAGATCTCATGAATGGACCAGGGTAATAATGCA
TTGTAATGAAACAAGGGATAAATATTAATTTTTCAAGCAAAATCGTCTGC
TATTTCAAATTCCATTTACACAGAATGCACCTGCATATGATAGAAACATG
AAACATTGCATCCAAAAGAAGACAGCCTAGGGAAGATCTATTTTGAGAAA
TGGTTTCAACTTTTTGTAGGAGATGTTACTTGCTGTAGATTACGCTGTAA
CCTACTAACCAAAAATGCCAATGTATGATAACGTTACATCAAAATAGGAA
TTCCAAGAATTCTTATCCTTTATTCTCATAACCCAGTGCGAGCTCGCCCA
GTGAGAGGACTGCCTCCACGGGGAAGGCACTATGGAACACTGCCACCATG
GGGCAATCGTAAGTTGAACTCCATTATCATTATTGACATAGTCATGACTA
ACATTGCCCCTGAACTTATGACTACATAAATTTAGGAAACAGTGGAGTCA
TTAGAAGATTGAAAAATGGACTTGACTAACCACTTTCTCGTTTGTTTTGA
GTCCATTGCAGGTATGTTCTTCAACTTCGGTTTTTATTTGTTTTTCTATT
ATAGTCATCTTCTCATCATGACCTTGTCTAACAATATGCATTGTGTTATC
TATTTCAGGTAAGAAGGTAAACATGGGAGCCAGGGCGATGCCATTCCAAA
CCAACCTGGGAAAGAGACGAGGTGGCGGCAGCATCACCCTGGGAAGACTT
CCCCCCATCGACAAGACTAGTTCATCGTGGGAGACGTTAACCTCTACTGA
CGTCATGGACATGTCACACTAG Coding sequence (CDS) from alignment at Sc0000086:708641..711312+ >transcript:BL95650_evm1 ID=transcript:BL95650_evm1|Name=transcript:BL95650_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4968bp|location=Sequence derived from alignment at Sc0000086:708641..711312+ (Branchiostoma lanceolatum)
ATGATCATGGCGAGAGGACCCCGGGCCTTCAACGTCTTCTGTGCCGCTTT
ACAACGGTGTGGATACCCGGGACTCGCGGCCAAACTGCTCAGGCCTATCG
CCACCAAGACAGAGCTGAAGGTACCATCCGTCCGTCTAAAGGACCAGCAG
TCTTCCATGGCTTCCATGTCCAGTTCTGTAAAGGACCTGTCTCTGGGCGA
GTCGACTATTTCCCCGGGGATTTCCAGCAGTCTCTACGCTCCTAGCACCA
TCGGACGTCTCCCCATGGTTAACGACTACGTCGCCAAGTCGTACGACGAC
AAAGGTATCGAGGCTCAACACAAGCTGGCACTGCAGCGTCACCGCCTGAC
TATCATCCGTCACCTGGACGTGCGCGACATCCGGGACTACATGCTGAAGA
ACCACGCCATCAAGGAGGCGGACATGGCCGCCATCCTGACTCAGCTCACC
CGACAGGACGAAGCAACCAAACTGGTGGACATCCTGAGCCAGAGGCCCGA
ACATGGCTTCCCGATATTCTGCAAAGCACTCCAGAAGTACGGATACCCGG
CTTTAGCAAGACAGCTGACAAGACCAACCCATCTGCCATCAGTGCGAGCT
CGCCCAGTGAGAGGACTGCCTCCACGGGGAAGGCACTATGGAACACTGCC
ACCATGGGGCAATCGTAAGAAGGTAAACATGGGAGCCAGGGCGATGCCAT
TCCAAACCAACCTGGGAAAGAGACGAGGTGGCGGCAGCATCACCCTGGGA
AGACTTCCCCCCATCGACAAGACTAGTTCATCGTGGGAGACGTTAACCTC
TACTGACGTCATGGACATGTCACACTAGATGATCATGGCGAGAGGACCCC
GGGCCTTCAACGTCTTCTGTGCCGCTTTACAACGGTGTGGATACCCGGGA
CTCGCGGCCAAACTGCTCAGGCCTATCGCCACCAAGACAGAGCTGAAGGT
ACCATCCGTCCGTCTAAAGGACCAGCAGTCTTCCATGGCTTCCATGTCCA
GTTCTGTAAAGGACCTGTCTCTGGGCGAGTCGACTATTTCCCCGGGGATT
TCCAGCAGTCTCTACGCTCCTAGCACCATCGGACGTCTCCCCATGGTTAA
CGACTACGTCGCCAAGTCGTACGACGACAAAGGTATCGAGGCTCAACACA
AGCTGGCACTGCAGCGTCACCGCCTGACTATCATCCGTCACCTGGACGTG
CGCGACATCCGGGACTACATGCTGAAGAACCACGCCATCAAGGAGGCGGA
CATGGCCGCCATCCTGACTCAGCTCACCCGACAGGACGAAGCAACCAAAC
TGGTGGACATCCTGAGCCAGAGGCCCGAACATGGCTTCCCGATATTCTGC
AAAGCACTCCAGAAGTACGGATACCCGGCTTTAGCAAGACAGCTGACAAG
ACCAACCCATCTGCCATCAGTGCGAGCTCGCCCAGTGAGAGGACTGCCTC
CACGGGGAAGGCACTATGGAACACTGCCACCATGGGGCAATCGTAAGAAG
GTAAACATGGGAGCCAGGGCGATGCCATTCCAAACCAACCTGGGAAAGAG
ACGAGGTGGCGGCAGCATCACCCTGGGAAGACTTCCCCCCATCGACAAGA
CTAGTTCATCGTGGGAGACGTTAACCTCTACTGACGTCATGGACATGTCA
CACTAGATGATCATGGCGAGAGGACCCCGGGCCTTCAACGTCTTCTGTGC
CGCTTTACAACGGTGTGGATACCCGGGACTCGCGGCCAAACTGCTCAGGC
CTATCGCCACCAAGACAGAGCTGAAGGTACCATCCGTCCGTCTAAAGGAC
CAGCAGTCTTCCATGGCTTCCATGTCCAGTTCTGTAAAGGACCTGTCTCT
GGGCGAGTCGACTATTTCCCCGGGGATTTCCAGCAGTCTCTACGCTCCTA
GCACCATCGGACGTCTCCCCATGGTTAACGACTACGTCGCCAAGTCGTAC
GACGACAAAGGTATCGAGGCTCAACACAAGCTGGCACTGCAGCGTCACCG
CCTGACTATCATCCGTCACCTGGACGTGCGCGACATCCGGGACTACATGC
TGAAGAACCACGCCATCAAGGAGGCGGACATGGCCGCCATCCTGACTCAG
CTCACCCGACAGGACGAAGCAACCAAACTGGTGGACATCCTGAGCCAGAG
GCCCGAACATGGCTTCCCGATATTCTGCAAAGCACTCCAGAAGTACGGAT
ACCCGGCTTTAGCAAGACAGCTGACAAGACCAACCCATCTGCCATCAGTG
CGAGCTCGCCCAGTGAGAGGACTGCCTCCACGGGGAAGGCACTATGGAAC
ACTGCCACCATGGGGCAATCGTAAGAAGGTAAACATGGGAGCCAGGGCGA
TGCCATTCCAAACCAACCTGGGAAAGAGACGAGGTGGCGGCAGCATCACC
CTGGGAAGACTTCCCCCCATCGACAAGACTAGTTCATCGTGGGAGACGTT
AACCTCTACTGACGTCATGGACATGTCACACTAGATGATCATGGCGAGAG
GACCCCGGGCCTTCAACGTCTTCTGTGCCGCTTTACAACGGTGTGGATAC
CCGGGACTCGCGGCCAAACTGCTCAGGCCTATCGCCACCAAGACAGAGCT
GAAGGTACCATCCGTCCGTCTAAAGGACCAGCAGTCTTCCATGGCTTCCA
TGTCCAGTTCTGTAAAGGACCTGTCTCTGGGCGAGTCGACTATTTCCCCG
GGGATTTCCAGCAGTCTCTACGCTCCTAGCACCATCGGACGTCTCCCCAT
GGTTAACGACTACGTCGCCAAGTCGTACGACGACAAAGGTATCGAGGCTC
AACACAAGCTGGCACTGCAGCGTCACCGCCTGACTATCATCCGTCACCTG
GACGTGCGCGACATCCGGGACTACATGCTGAAGAACCACGCCATCAAGGA
GGCGGACATGGCCGCCATCCTGACTCAGCTCACCCGACAGGACGAAGCAA
CCAAACTGGTGGACATCCTGAGCCAGAGGCCCGAACATGGCTTCCCGATA
TTCTGCAAAGCACTCCAGAAGTACGGATACCCGGCTTTAGCAAGACAGCT
GACAAGACCAACCCATCTGCCATCAGTGCGAGCTCGCCCAGTGAGAGGAC
TGCCTCCACGGGGAAGGCACTATGGAACACTGCCACCATGGGGCAATCGT
AAGAAGGTAAACATGGGAGCCAGGGCGATGCCATTCCAAACCAACCTGGG
AAAGAGACGAGGTGGCGGCAGCATCACCCTGGGAAGACTTCCCCCCATCG
ACAAGACTAGTTCATCGTGGGAGACGTTAACCTCTACTGACGTCATGGAC
ATGTCACACTAGATGATCATGGCGAGAGGACCCCGGGCCTTCAACGTCTT
CTGTGCCGCTTTACAACGGTGTGGATACCCGGGACTCGCGGCCAAACTGC
TCAGGCCTATCGCCACCAAGACAGAGCTGAAGGTACCATCCGTCCGTCTA
AAGGACCAGCAGTCTTCCATGGCTTCCATGTCCAGTTCTGTAAAGGACCT
GTCTCTGGGCGAGTCGACTATTTCCCCGGGGATTTCCAGCAGTCTCTACG
CTCCTAGCACCATCGGACGTCTCCCCATGGTTAACGACTACGTCGCCAAG
TCGTACGACGACAAAGGTATCGAGGCTCAACACAAGCTGGCACTGCAGCG
TCACCGCCTGACTATCATCCGTCACCTGGACGTGCGCGACATCCGGGACT
ACATGCTGAAGAACCACGCCATCAAGGAGGCGGACATGGCCGCCATCCTG
ACTCAGCTCACCCGACAGGACGAAGCAACCAAACTGGTGGACATCCTGAG
CCAGAGGCCCGAACATGGCTTCCCGATATTCTGCAAAGCACTCCAGAAGT
ACGGATACCCGGCTTTAGCAAGACAGCTGACAAGACCAACCCATCTGCCA
TCAGTGCGAGCTCGCCCAGTGAGAGGACTGCCTCCACGGGGAAGGCACTA
TGGAACACTGCCACCATGGGGCAATCGTAAGAAGGTAAACATGGGAGCCA
GGGCGATGCCATTCCAAACCAACCTGGGAAAGAGACGAGGTGGCGGCAGC
ATCACCCTGGGAAGACTTCCCCCCATCGACAAGACTAGTTCATCGTGGGA
GACGTTAACCTCTACTGACGTCATGGACATGTCACACTAGATGATCATGG
CGAGAGGACCCCGGGCCTTCAACGTCTTCTGTGCCGCTTTACAACGGTGT
GGATACCCGGGACTCGCGGCCAAACTGCTCAGGCCTATCGCCACCAAGAC
AGAGCTGAAGGTACCATCCGTCCGTCTAAAGGACCAGCAGTCTTCCATGG
CTTCCATGTCCAGTTCTGTAAAGGACCTGTCTCTGGGCGAGTCGACTATT
TCCCCGGGGATTTCCAGCAGTCTCTACGCTCCTAGCACCATCGGACGTCT
CCCCATGGTTAACGACTACGTCGCCAAGTCGTACGACGACAAAGGTATCG
AGGCTCAACACAAGCTGGCACTGCAGCGTCACCGCCTGACTATCATCCGT
CACCTGGACGTGCGCGACATCCGGGACTACATGCTGAAGAACCACGCCAT
CAAGGAGGCGGACATGGCCGCCATCCTGACTCAGCTCACCCGACAGGACG
AAGCAACCAAACTGGTGGACATCCTGAGCCAGAGGCCCGAACATGGCTTC
CCGATATTCTGCAAAGCACTCCAGAAGTACGGATACCCGGCTTTAGCAAG
ACAGCTGACAAGACCAACCCATCTGCCATCAGTGCGAGCTCGCCCAGTGA
GAGGACTGCCTCCACGGGGAAGGCACTATGGAACACTGCCACCATGGGGC
AATCGTAAGAAGGTAAACATGGGAGCCAGGGCGATGCCATTCCAAACCAA
CCTGGGAAAGAGACGAGGTGGCGGCAGCATCACCCTGGGAAGACTTCCCC
CCATCGACAAGACTAGTTCATCGTGGGAGACGTTAACCTCTACTGACGTC
ATGGACATGTCACACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:708641..711312 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95650_evm1 |
| Biotype | protein_coding |
|
