|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95635_evm0 >transcript:BL95635_evm0-protein ID=transcript:BL95635_evm0-protein|Name=transcript:BL95635_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=270bp
MKTERCDFVRRRATPPSSVRPHRKGLDTDMFGEILSYIYSGTLHVSLDKV
QPLYQAADLLQLDYVRDTCSSYMAMNMERSTCMDLYKFAGCSSEEFCSLS
VNQLTEIISHDELDVEEGTTVWEAVVRWVQHSREDRQHHLPSILPHIRFN
LMTSDDTAAILEHPLVREGPGSPEVIRKVVQKGNSNLKPRLGMTMEMVLL
FTTEEDELLYMNPQEGKYISCTCDDFPDATALTVTSDNQMYILENEREDC
NKLSMFKYNHAENMWKHAVL Run BLAST on NCBI mRNA from alignment at Sc0000078:302933..306762+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95635_evm0 ID=transcript:BL95635_evm0|Name=transcript:BL95635_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3830bp|location=Sequence derived from alignment at Sc0000078:302933..306762+ (Branchiostoma lanceolatum)
ATGAAAACGGAACGGTGTGATTTCGTCCGGCGCCGAGCCACGCCGCCAAG
CTCTGTGCGACCGCATCGAAAGGTATGAGTCAGTGCAGCAGAACGCACAG
CGTCCAATAAAGGTTTGAGATTCNTCATGACAATAAAAAGAAAATAAGAA
TATTAATTTTCATCAATAACTAGAGCATTTGTAAATGTTCATACACAAAA
GTATCGTGTTTTAGAAAGGTCAGCGGTACGCCAAATCCGTGCCGCGCCAA
ATCCAAGATGTCGTCGGGACCAAGGAACAACAATTCTCGCCCGATGTTTT
GCCCGCCGCGAAGTCATTTTTCGGCAGAATTTAGTAAGGCACAGACATAT
TTTTGTTGAAAATACAAGAAATAGATAGTTATTTCTGTGAAATCTGACTT
TTTGACGCCATTGACTACGTATTCGTTTTGAAAATTGAGTTTACACCGAA
CTGAGTTTGCGGTTAACTATAAGATGCACAACAACCTCACAAACATTTGT
CTTTAGAGTAGAGTAGAGTAGAATTTTCGGTCAGGTAGGACTGTTCCTTT
ACAGTGTTTATAGGGGGAACGTTTTATCAAAACACTTCATGGAGGAATCG
ATGCTATAACATTGCTATTCCATATATTTTTGTCCTTATTTTTGTCCTTC
AAAGTCTTGAAAACATTTCCGTGAAATCCGACAGCAAAATGATCCGATGT
CACCACACGCTTGAAAATTAGGCGGCCGCCATGGGCAGGGATTGTGCTCT
GTGTGGTCCCAATTCGTGGCGGTCGCGGTCGCGTTGGACGGGTGGTCGCC
TTGGGCAGGCAGCTTAATGCTTGTGCCTATGGGGACAATTTTCGGGACCG
AGAAAAAGCGGTCGCCATGGCCAGGTGGTCGCGTTGAAAAGGTGGTCACC
TAGGCAGGTTTGACTGTACATGATAGCAGCTTTGTAGTAGAAGTTTGAAC
ATAATATACTACATGTACTATGTATTGTTTTCCAGGGTTTGGATACAGAC
ATGTTTGGGGAGATCCTGAGTTACATCTACTCAGGAACCCTCCATGTGTC
CCTGGACAAAGTGCAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGG
ACTATGTAAGAGACACCTGCAGCAGCTACATGGCCATGAATATGGAGCGC
TCCACCTGTATGGACCTGTACAAGTTTGCTGGTGTCTTCTCCCTGGAGAT
TGTCAGGGCAGTCTGTCTGCCGCATATCACCAGAAACTTTACTGAGGTTA
GTGTTCATTATGGGTAAGGCAGTTGTGCCGAATAGGAATCTGCTACTGCA
TTCATATTACACATACTGCAATGGAGATCTACTGTCAGGCATCTACTGTC
TCCGCCTCGAAACTTTTTGTATTTCGCTAAGCTGGGATAAGCTGGGCAAC
AATAATGTAAATGGATTTTTTGTGTGATCTTTATTTCGCGCTAAGGCGAA
AATGAAGTGTTCAGCCCTGGTTTTAATTTCGCGGCAGTGCTTAAGTCACA
TAGGGCTGCAGTATCAAACAAAAATGTTTGAAGTGGTTTTAAGTTTGCAG
TGAAACGGTAGCCGCAAAAGCCGCGAACATAAAACTACCGCCAACATTTC
TGCTTTCAGTATTTGGAACCCTGCTTTTGCTGAAGGGCAGTTACACCAGA
TATACAGACACGGGGTCATGTACGCAATCATTACCATCTTCTATGTCAAA
ACAAGATTAAACACATTTATGCAGTATCTTAGAACAAGTACATGACTTGT
ACTCTTCACCTTCACAGGTTGCTCCAGCGAGGAGTTCTGCAGCCTGAGCG
TGAATCAGCTGACTGAGATTATCAGCCACGATGAGCTGGATGTTGAAGAG
GGGACAACAGTGTGGGAGGCAGTGGTGAGATGGGTGCAGCACAGCAGGGA
GGACAGGTGGGCATTAGTGTTTTGTTGGTTCAGTTAAATTATCATATTGT
AGTCGGTACTTGAACTAAGTTTGATGTATTAAGAAACTGATGTGTTGCCA
AGAAATCAGCTGAATCAACCTTTACCTTGTACCTTACAGACAGCACCACC
TACCCAGCATCCTCCCTCATATCCGCTTCAACCTGATGACCTCAGACGAC
ACGGCAGCCATCTTGGAACACCCCCTGGTCAGGGAGGGTCCTGGGAGTCC
TGAGGTCATCAGGAAAGTGGTACAGAAAGGAAACTCAAACCTGAAGCCCA
GGCTTGGGATGACCATGGAGATGGTTCTACTTTTCACTACAGAGTATGTA
TATACTAGTACTTCTTTTTTGACTTGCTGAAAGTCAGGAACTATTCTTGT
ACAATATCTATTACCCCGTTTGCAAAACACATACCCACAGTCTTAATTTT
TTTATATATATACTCGTAACCTTATTCCAGCTTAAACTGAAGCACATTTT
TAAGGGGCTACAAAATAAGATTTAATAGATGACAACAATGCCTGCAGAGA
TTTTAAAAAGTATGAATTTTCAGTTTTATAGAGTTTGTGGTGTACTTTAT
CCAGGGAAGATGAGCTCCTCTACATGAATCCTCAGGAAGGGAAGTACATC
AGCTGCACTTGTGACGACTTTCCTGATGCCACAGCCTTGACAGTCACCAG
CGATAATCAGATGTACATACTGGAGAATGAGCGAGAGGATTGTAATAAGT
TGTCCATGTTTAAGTACAACCATGCAGAGAATATGTGGAAACATGCTGGT
ATGTCCTCAGTATCTGTATCTGACGGGAAAGACTTCCTTGTTGAAGTTGA
TCAGATTTTATATTGCTGTCCTGCTGATCTAAGAGAACACAGTGCATTAG
TGCGGATGAGTAAGTACAACCGGCACACGGACCAGTGGCAGGAGTGTTCA
CAGCTACAACTTTATGGAACTTGGCATTTCTGTGCTGCATTGTCCTGCAG
TTCGCACCTCTATCTCATCATGGACTCAGCAATGCATCGTTATGACCCGA
GCAAGGACTGTTGGTGCGAGCGGACCCCACCGAATCTGAAAGGTCGTTAC
TCAACTTTCACAACAGTTGCCATGGGAAAAGAGATTTTCTGCACAGATTG
GGATTTCAGTCAGACTACGGTTTACGATACAGAGTCAGACTGCTGGCAGA
AACTGCAAGTATGGCCGGACCCAGGAAACCTAAGTGCCAGTCACACTCCG
AGTCTTTTTGTACTGGAGAACCAACTTCATATATTGTTAGAAGTCTATGA
CAAAGTTAAAGGAGGGCCATCAACAGGCTATCTGGTATATGTGTATGACA
GGTCTGCTGATGCCTGGAGAGACTTGAAGGCCATTATACCCAAATACGAA
TATATAGCACGTAGTCCGCTTTGCCCTGTGGTACGTATGTACCTACCTTA
TCTTCAGGGGGCACAAATACACATCACTTCTTACGGTTGTCATCGTTAAT
GTGTAGGAAAAGGACACACGGACCATGTAACCCGCAGGACTGTTTAATGA
CATTGTTTCTTAGATATCGGCTTTTACAGAATACCCTTACAACGGGAGAG
GCTTTGTTTACAGAATACCCTTACAATGGGAGAGGCTTTGTTTACAGAAT
ACCCTTACAATGGGAGAGGCTTTGTAGTACAGTTTTTACTTCAGCTTTGA
AGTAGCACTTTTGTCTTTAACAACCCTCGATTCTTTCTTATGACATCGAT
GAATCATGGGGTGATGTCATTTCCCCACCCCCCGAGAGACATATTTCCAT
AACAGACCTGGTGCCCTACGTGTCTTAAACTCCAACAGCAGTCAGAAACA
AGACATCATGCTCTTTATGACATATTAACAATTATTGTACATGTGTTTAG
ATCCTGTGTATCTTTCCTGCAGTGTTATGA Coding sequence (CDS) from alignment at Sc0000078:302933..306762+ >transcript:BL95635_evm0 ID=transcript:BL95635_evm0|Name=transcript:BL95635_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4878bp|location=Sequence derived from alignment at Sc0000078:302933..306762+ (Branchiostoma lanceolatum)
ATGAAAACGGAACGGTGTGATTTCGTCCGGCGCCGAGCCACGCCGCCAAG
CTCTGTGCGACCGCATCGAAAGGGTTTGGATACAGACATGTTTGGGGAGA
TCCTGAGTTACATCTACTCAGGAACCCTCCATGTGTCCCTGGACAAAGTG
CAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGGACTATGTAAGAGA
CACCTGCAGCAGCTACATGGCCATGAATATGGAGCGCTCCACCTGTATGG
ACCTGTACAAGTTTGCTGGTTGCTCCAGCGAGGAGTTCTGCAGCCTGAGC
GTGAATCAGCTGACTGAGATTATCAGCCACGATGAGCTGGATGTTGAAGA
GGGGACAACAGTGTGGGAGGCAGTGGTGAGATGGGTGCAGCACAGCAGGG
AGGACAGACAGCACCACCTACCCAGCATCCTCCCTCATATCCGCTTCAAC
CTGATGACCTCAGACGACACGGCAGCCATCTTGGAACACCCCCTGGTCAG
GGAGGGTCCTGGGAGTCCTGAGGTCATCAGGAAAGTGGTACAGAAAGGAA
ACTCAAACCTGAAGCCCAGGCTTGGGATGACCATGGAGATGGTTCTACTT
TTCACTACAGAGGAAGATGAGCTCCTCTACATGAATCCTCAGGAAGGGAA
GTACATCAGCTGCACTTGTGACGACTTTCCTGATGCCACAGCCTTGACAG
TCACCAGCGATAATCAGATGTACATACTGGAGAATGAGCGAGAGGATTGT
AATAAGTTGTCCATGTTTAAGTACAACCATGCAGAGAATATGTGGAAACA
TGCTGTGTTATGAATGAAAACGGAACGGTGTGATTTCGTCCGGCGCCGAG
CCACGCCGCCAAGCTCTGTGCGACCGCATCGAAAGGGTTTGGATACAGAC
ATGTTTGGGGAGATCCTGAGTTACATCTACTCAGGAACCCTCCATGTGTC
CCTGGACAAAGTGCAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGG
ACTATGTAAGAGACACCTGCAGCAGCTACATGGCCATGAATATGGAGCGC
TCCACCTGTATGGACCTGTACAAGTTTGCTGGTTGCTCCAGCGAGGAGTT
CTGCAGCCTGAGCGTGAATCAGCTGACTGAGATTATCAGCCACGATGAGC
TGGATGTTGAAGAGGGGACAACAGTGTGGGAGGCAGTGGTGAGATGGGTG
CAGCACAGCAGGGAGGACAGACAGCACCACCTACCCAGCATCCTCCCTCA
TATCCGCTTCAACCTGATGACCTCAGACGACACGGCAGCCATCTTGGAAC
ACCCCCTGGTCAGGGAGGGTCCTGGGAGTCCTGAGGTCATCAGGAAAGTG
GTACAGAAAGGAAACTCAAACCTGAAGCCCAGGCTTGGGATGACCATGGA
GATGGTTCTACTTTTCACTACAGAGGAAGATGAGCTCCTCTACATGAATC
CTCAGGAAGGGAAGTACATCAGCTGCACTTGTGACGACTTTCCTGATGCC
ACAGCCTTGACAGTCACCAGCGATAATCAGATGTACATACTGGAGAATGA
GCGAGAGGATTGTAATAAGTTGTCCATGTTTAAGTACAACCATGCAGAGA
ATATGTGGAAACATGCTGTGTTATGAATGAAAACGGAACGGTGTGATTTC
GTCCGGCGCCGAGCCACGCCGCCAAGCTCTGTGCGACCGCATCGAAAGGG
TTTGGATACAGACATGTTTGGGGAGATCCTGAGTTACATCTACTCAGGAA
CCCTCCATGTGTCCCTGGACAAAGTGCAGCCCCTGTACCAGGCAGCCGAC
CTCCTCCAACTGGACTATGTAAGAGACACCTGCAGCAGCTACATGGCCAT
GAATATGGAGCGCTCCACCTGTATGGACCTGTACAAGTTTGCTGGTTGCT
CCAGCGAGGAGTTCTGCAGCCTGAGCGTGAATCAGCTGACTGAGATTATC
AGCCACGATGAGCTGGATGTTGAAGAGGGGACAACAGTGTGGGAGGCAGT
GGTGAGATGGGTGCAGCACAGCAGGGAGGACAGACAGCACCACCTACCCA
GCATCCTCCCTCATATCCGCTTCAACCTGATGACCTCAGACGACACGGCA
GCCATCTTGGAACACCCCCTGGTCAGGGAGGGTCCTGGGAGTCCTGAGGT
CATCAGGAAAGTGGTACAGAAAGGAAACTCAAACCTGAAGCCCAGGCTTG
GGATGACCATGGAGATGGTTCTACTTTTCACTACAGAGGAAGATGAGCTC
CTCTACATGAATCCTCAGGAAGGGAAGTACATCAGCTGCACTTGTGACGA
CTTTCCTGATGCCACAGCCTTGACAGTCACCAGCGATAATCAGATGTACA
TACTGGAGAATGAGCGAGAGGATTGTAATAAGTTGTCCATGTTTAAGTAC
AACCATGCAGAGAATATGTGGAAACATGCTGTGTTATGAATGAAAACGGA
ACGGTGTGATTTCGTCCGGCGCCGAGCCACGCCGCCAAGCTCTGTGCGAC
CGCATCGAAAGGGTTTGGATACAGACATGTTTGGGGAGATCCTGAGTTAC
ATCTACTCAGGAACCCTCCATGTGTCCCTGGACAAAGTGCAGCCCCTGTA
CCAGGCAGCCGACCTCCTCCAACTGGACTATGTAAGAGACACCTGCAGCA
GCTACATGGCCATGAATATGGAGCGCTCCACCTGTATGGACCTGTACAAG
TTTGCTGGTTGCTCCAGCGAGGAGTTCTGCAGCCTGAGCGTGAATCAGCT
GACTGAGATTATCAGCCACGATGAGCTGGATGTTGAAGAGGGGACAACAG
TGTGGGAGGCAGTGGTGAGATGGGTGCAGCACAGCAGGGAGGACAGACAG
CACCACCTACCCAGCATCCTCCCTCATATCCGCTTCAACCTGATGACCTC
AGACGACACGGCAGCCATCTTGGAACACCCCCTGGTCAGGGAGGGTCCTG
GGAGTCCTGAGGTCATCAGGAAAGTGGTACAGAAAGGAAACTCAAACCTG
AAGCCCAGGCTTGGGATGACCATGGAGATGGTTCTACTTTTCACTACAGA
GGAAGATGAGCTCCTCTACATGAATCCTCAGGAAGGGAAGTACATCAGCT
GCACTTGTGACGACTTTCCTGATGCCACAGCCTTGACAGTCACCAGCGAT
AATCAGATGTACATACTGGAGAATGAGCGAGAGGATTGTAATAAGTTGTC
CATGTTTAAGTACAACCATGCAGAGAATATGTGGAAACATGCTGTGTTAT
GAATGAAAACGGAACGGTGTGATTTCGTCCGGCGCCGAGCCACGCCGCCA
AGCTCTGTGCGACCGCATCGAAAGGGTTTGGATACAGACATGTTTGGGGA
GATCCTGAGTTACATCTACTCAGGAACCCTCCATGTGTCCCTGGACAAAG
TGCAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGGACTATGTAAGA
GACACCTGCAGCAGCTACATGGCCATGAATATGGAGCGCTCCACCTGTAT
GGACCTGTACAAGTTTGCTGGTTGCTCCAGCGAGGAGTTCTGCAGCCTGA
GCGTGAATCAGCTGACTGAGATTATCAGCCACGATGAGCTGGATGTTGAA
GAGGGGACAACAGTGTGGGAGGCAGTGGTGAGATGGGTGCAGCACAGCAG
GGAGGACAGACAGCACCACCTACCCAGCATCCTCCCTCATATCCGCTTCA
ACCTGATGACCTCAGACGACACGGCAGCCATCTTGGAACACCCCCTGGTC
AGGGAGGGTCCTGGGAGTCCTGAGGTCATCAGGAAAGTGGTACAGAAAGG
AAACTCAAACCTGAAGCCCAGGCTTGGGATGACCATGGAGATGGTTCTAC
TTTTCACTACAGAGGAAGATGAGCTCCTCTACATGAATCCTCAGGAAGGG
AAGTACATCAGCTGCACTTGTGACGACTTTCCTGATGCCACAGCCTTGAC
AGTCACCAGCGATAATCAGATGTACATACTGGAGAATGAGCGAGAGGATT
GTAATAAGTTGTCCATGTTTAAGTACAACCATGCAGAGAATATGTGGAAA
CATGCTGTGTTATGAATGAAAACGGAACGGTGTGATTTCGTCCGGCGCCG
AGCCACGCCGCCAAGCTCTGTGCGACCGCATCGAAAGGGTTTGGATACAG
ACATGTTTGGGGAGATCCTGAGTTACATCTACTCAGGAACCCTCCATGTG
TCCCTGGACAAAGTGCAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACT
GGACTATGTAAGAGACACCTGCAGCAGCTACATGGCCATGAATATGGAGC
GCTCCACCTGTATGGACCTGTACAAGTTTGCTGGTTGCTCCAGCGAGGAG
TTCTGCAGCCTGAGCGTGAATCAGCTGACTGAGATTATCAGCCACGATGA
GCTGGATGTTGAAGAGGGGACAACAGTGTGGGAGGCAGTGGTGAGATGGG
TGCAGCACAGCAGGGAGGACAGACAGCACCACCTACCCAGCATCCTCCCT
CATATCCGCTTCAACCTGATGACCTCAGACGACACGGCAGCCATCTTGGA
ACACCCCCTGGTCAGGGAGGGTCCTGGGAGTCCTGAGGTCATCAGGAAAG
TGGTACAGAAAGGAAACTCAAACCTGAAGCCCAGGCTTGGGATGACCATG
GAGATGGTTCTACTTTTCACTACAGAGGAAGATGAGCTCCTCTACATGAA
TCCTCAGGAAGGGAAGTACATCAGCTGCACTTGTGACGACTTTCCTGATG
CCACAGCCTTGACAGTCACCAGCGATAATCAGATGTACATACTGGAGAAT
GAGCGAGAGGATTGTAATAAGTTGTCCATGTTTAAGTACAACCATGCAGA
GAATATGTGGAAACATGCTGTGTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:302933..306762 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95635_evm0 |
| Biotype | protein_coding |
|
