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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95628_evm3 >transcript:BL95628_evm3-protein ID=transcript:BL95628_evm3-protein|Name=transcript:BL95628_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=334bp
MFLLLVVFVCAQSAAGEDGWFWQVTDFHYDPRYSTAGVPGAMCHESGGRQ
DGSPGVWGDYLCDAPWALINSSVYAMRQIEPNPDFILWTGDDTPHVPNEE
LGQQVVINIIGNLTSLLKEVFPTKRVYAALGNHDYHPKNQLPPSGSDIYD
AVAEFWRDWMDDDTAKNVFKQGGYYAVSHAPHLRIVSVNTNLHYRSNLVT
KDREDPGGHFAWLDRVLSDAQTNSEMVFIVGHLPPGFFELKRSQYWMYPN
FNERYNELVRKHSAVIAGQFFGHHHTDSFRVFYDDEGSAVSSMFLCPAVT
PWKTTLPGISGFGANNPGVRLYKYDRQTLQIKVN Run BLAST on NCBI mRNA from alignment at Sc0000076:573321..576798+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95628_evm3 ID=transcript:BL95628_evm3|Name=transcript:BL95628_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=3478bp|location=Sequence derived from alignment at Sc0000076:573321..576798+ (Branchiostoma lanceolatum)
ATGTTTCTCCTGCTTGTGGTGTTTGTGTGCGCCCAGAGTGCGGCTGGGGA
GGACGGTGGGTGCATAGGTTATCACAGAGTCTATACATAGATAGTCTACC
GATGTGCAGTAGATCATCCGTGTCAGGGTCGCAGAAATAGTCGGCAGAAT
TGAAGGACAAAGACAAACGAATGTGGATGTGGGAGGGCCACGGAACGTGT
ACATGTGCACGTCGTGTTCATGCGTACAAATGTACAACGGGAAACAAATG
TTATTTGTTGTTTTGGTAACGTTACTTTTGTATTTATCGCTTAATCGATA
ACATTTCGTGTAAAATGCACTTGCAATTAGCCCTCGTGTGTGTACTTTGT
AGTAAAACTTACTATTTTCAATCGCAGAATAAAAAGAGTACAAATACAGA
AAATGTTCCGATTCTGAAGGATATTTCCTCCTTCGTAACCCTGTTAGTCG
CAGTTTGCTGTGCATCATCAGATTTTAGAAACTTAGCTTTCCGTTTTTAT
ACATGGAGGGCAACCATCGAACCAGGAAAGCGAATGTTCTATTTCATTTT
GCACACGGCACTGCGTCAGTCCAAAGGCCAGGCCACATACGTAACTTGTA
TGCATGGCTTGTATGCTAATCTCTCAACGTGTTCATTTTGGCTCATGTCC
CTTTAAACTTGCCCGTCTTACGCTTCCAGGCTGGTTTTGGCAGGTGACAG
ATTTCCACTATGACCCCCGCTACTCCACCGCCGGGGTCCCGGGCGCGATG
TGCCACGAGTCGGGCGGGCGGCAGGACGGCTCCCCGGGGGTGTGGGGAGA
CTACCTGTGTGACGCTCCCTGGGCGCTGATCAACTCTTCAGTGTACGCCA
TGAGACAAATAGAACCCAACCCTGACTTCATACTGTGGACGGGGTAAGGA
TGGTCCGATGGTGTTGAGATTCGGTCATTGCTTGGTCATCGAGAGACGGA
AGAGAAAGCCACGAGCATGTAATATCCCCCAAAATCTGACCAAGCACACT
GGGTCACACATATTTTCATCATCGTGATGAAGTTCAGGGGGTGACGCCAA
TGCTGAGGCTCCCACACACACGGGACCCTGAAACAAACCCATAAGCGATA
TACGCAGTAGGGTAGTCTTGACAATCCCTCCCTTTTACCGGGCCAAGCCC
TTGTAAGGCTGCACCAAGTAATTTTTATGGATGACGTCCTTTGGAGACCC
TAAATCTAATGCGGGAGCGCGAAAAAAACACAAGAAGGGCCGAAAAAAAC
AAGATGCCTAGATTTGAAATATAATAGTCGACGACACATGTTAGGACGCA
AATTGAATGAGAGAACACAGTGTAACAACTAACAATTCTTTGATCCATCA
TGAAAAAAACAATAATTTGAATAAATCAGTTGAAGTTGAACAGCAGTTGT
TGTCCTGTCCTGTTTCTTTCCATATTCCATTGATTTTGCAGGCCTGCAGA
AATATATTAAATAAAAAAGGAACTCTTTGGTCATAGTTACAGGAAGCGCA
ATTTCTTGTGTTTTTTTTTTTTGGAACAGACCAAAATCAATGCGCGCGCG
GACGTCATCCATAAAAATTACTTGGTGTAGCCTAACATGGTGAAACTGTG
CTGGCTTTCTCTTCATGTCAGAGTGTCAGATTAAAAGTTCAGATCTATTT
GAGAACGATAATTATAAAAACAAACATCCAAAGTATTATAGGTAGCGAAA
ACATCAGGGGGCTAAAAAGTCACCAAAATTGATATATCCACATATTTTTG
TACTTTCCGATCCTAACGTCTGGCTCAGGGATGACACCCCGCATGTGCCA
AACGAAGAGCTCGGACAGCAGGTTGTCATCAACATCATCGGTAACCTGAC
GTCACTACTGAAGGAGGTCTTTCCGACCAAGAGGGTGTACGCAGCCCTCG
GTAACCATGACTACCACCCTAAGAACCAGTTACCGCCCAGCGGGAGTGAC
ATCTACGACGCCGTTGCCGAGTTCTGGCGGGACTGGATGGATGACGACAC
GGCCAAAAACGTCTTCAAGCAAGGTACAAAACTGGCGAGAAGGGGGAGGG
GACAAGCTAAGTATCTACATCAATAATTGATGGCGTAACTGTGACACACC
TATAAACTGTGGCGTTATACCTAAATTTGGTTTGTCACAATGAATAAAGT
GATCATTCCGCTTTTTGCAGTTTGCGAACTAGCCATAGTGACTCTACCTG
GGGTTCATTTTGATACTGTCTGAGACCTTGTCGTACTGTGTCCAAACAAA
GCAAAAGAAGCCCTGCTACAGACTACTCACAAACGTATAACCATCCAATA
CAAGTGCCTGTCTTAGGGCCCTGTCACACTTGTGCGTATATTCAAGTGCG
CGTGAGTTACGCATTAACATTTTTTTTGGTTTAAGTAAGGTTTGCGGGAA
AAAGTTGTTTTCTACTTTGATCCACTGTTGTCAGCCTAGTGATCGAACCT
AAGAAATCACTTATTCGGCTGCAAACTTAAAACCAAAAACATGTTAATAC
GCAACCCATGCGGACCTGTACATACGCACAAGTGTGACAAGGGCTTTACT
AAGAACACATGAACTGTATTTACAGGTGGTTACTACGCGGTGTCCCATGC
TCCTCACCTGCGCATTGTTAGCGTGAACACCAACCTCCACTACAGGTCTA
ACCTGGTGACTAAAGACAGGGAGGATCCGGGCGGACACTTCGCCTGGCTG
GACCGAGTGCTTAGCGACGCACAAACCAACTCAGAAATGGTATTATCATT
TGAATAAATTGTAACATGATTCATTTTGCACAACGGTGTTTTGTACTTCA
ACTCAGAATTTAATTTTTCCACACAGTGACTGTTTCATGTACCATTCATA
GGTTTTTATTGTCGGACACCTGCCACCTGGATTCTTCGAGTTGAAGAGAA
GCCAGTATTGGATGTACCCGAACTTTAACGAGCGTTACAACGAACTCGTT
CGGAAGCATTCGGCAGTCATCGCGGGACAGTTCTTCGGCCACCACCACAC
GGACAGTTTCCGTGTCTTCTACGATGATGAAGGTGAGACATAAAGGTTTC
ATCACGGATTCACGGTTGCTTGTGAGATGAATAGAAGAAAACTGTCAACC
TCTTCACAATAGCGCAGCAAAGATGAGGTTGAATTTGAGATAGGCTCCCT
TGTATATCTCAAAACTGTGACACGCTTTAGCTGTACCCTTGTATGCGGTC
TTGCCTAACACCTGTCTTGGTGACTCCTCGAAAGAACCCCACATAGGATA
TAAACGGATAGTTCTGATGGCTGGCAAGTAGCAGACAAAGGTCTTTGCAT
TTCTTACACGTCAACTTTTCTCCATGCTGTAGGATCAGCCGTTAGCTCGA
TGTTCCTGTGTCCTGCCGTGACCCCGTGGAAGACGACCCTGCCCGGCATA
AGCGGGTTCGGCGCCAACAACCCTGGTGTCAGGCTGTACAAGTACGACAG
ACAGACGCTACAAATTAAGGTGAATTGA Coding sequence (CDS) from alignment at Sc0000076:573321..576798+ >transcript:BL95628_evm3 ID=transcript:BL95628_evm3|Name=transcript:BL95628_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=6030bp|location=Sequence derived from alignment at Sc0000076:573321..576798+ (Branchiostoma lanceolatum)
ATGTTTCTCCTGCTTGTGGTGTTTGTGTGCGCCCAGAGTGCGGCTGGGGA
GGACGGCTGGTTTTGGCAGGTGACAGATTTCCACTATGACCCCCGCTACT
CCACCGCCGGGGTCCCGGGCGCGATGTGCCACGAGTCGGGCGGGCGGCAG
GACGGCTCCCCGGGGGTGTGGGGAGACTACCTGTGTGACGCTCCCTGGGC
GCTGATCAACTCTTCAGTGTACGCCATGAGACAAATAGAACCCAACCCTG
ACTTCATACTGTGGACGGGGGATGACACCCCGCATGTGCCAAACGAAGAG
CTCGGACAGCAGGTTGTCATCAACATCATCGGTAACCTGACGTCACTACT
GAAGGAGGTCTTTCCGACCAAGAGGGTGTACGCAGCCCTCGGTAACCATG
ACTACCACCCTAAGAACCAGTTACCGCCCAGCGGGAGTGACATCTACGAC
GCCGTTGCCGAGTTCTGGCGGGACTGGATGGATGACGACACGGCCAAAAA
CGTCTTCAAGCAAGGTGGTTACTACGCGGTGTCCCATGCTCCTCACCTGC
GCATTGTTAGCGTGAACACCAACCTCCACTACAGGTCTAACCTGGTGACT
AAAGACAGGGAGGATCCGGGCGGACACTTCGCCTGGCTGGACCGAGTGCT
TAGCGACGCACAAACCAACTCAGAAATGGTTTTTATTGTCGGACACCTGC
CACCTGGATTCTTCGAGTTGAAGAGAAGCCAGTATTGGATGTACCCGAAC
TTTAACGAGCGTTACAACGAACTCGTTCGGAAGCATTCGGCAGTCATCGC
GGGACAGTTCTTCGGCCACCACCACACGGACAGTTTCCGTGTCTTCTACG
ATGATGAAGGATCAGCCGTTAGCTCGATGTTCCTGTGTCCTGCCGTGACC
CCGTGGAAGACGACCCTGCCCGGCATAAGCGGGTTCGGCGCCAACAACCC
TGGTGTCAGGCTGTACAAGTACGACAGACAGACGCTACAAATTAAGGTGA
ATTGAATGTTTCTCCTGCTTGTGGTGTTTGTGTGCGCCCAGAGTGCGGCT
GGGGAGGACGGCTGGTTTTGGCAGGTGACAGATTTCCACTATGACCCCCG
CTACTCCACCGCCGGGGTCCCGGGCGCGATGTGCCACGAGTCGGGCGGGC
GGCAGGACGGCTCCCCGGGGGTGTGGGGAGACTACCTGTGTGACGCTCCC
TGGGCGCTGATCAACTCTTCAGTGTACGCCATGAGACAAATAGAACCCAA
CCCTGACTTCATACTGTGGACGGGGGATGACACCCCGCATGTGCCAAACG
AAGAGCTCGGACAGCAGGTTGTCATCAACATCATCGGTAACCTGACGTCA
CTACTGAAGGAGGTCTTTCCGACCAAGAGGGTGTACGCAGCCCTCGGTAA
CCATGACTACCACCCTAAGAACCAGTTACCGCCCAGCGGGAGTGACATCT
ACGACGCCGTTGCCGAGTTCTGGCGGGACTGGATGGATGACGACACGGCC
AAAAACGTCTTCAAGCAAGGTGGTTACTACGCGGTGTCCCATGCTCCTCA
CCTGCGCATTGTTAGCGTGAACACCAACCTCCACTACAGGTCTAACCTGG
TGACTAAAGACAGGGAGGATCCGGGCGGACACTTCGCCTGGCTGGACCGA
GTGCTTAGCGACGCACAAACCAACTCAGAAATGGTTTTTATTGTCGGACA
CCTGCCACCTGGATTCTTCGAGTTGAAGAGAAGCCAGTATTGGATGTACC
CGAACTTTAACGAGCGTTACAACGAACTCGTTCGGAAGCATTCGGCAGTC
ATCGCGGGACAGTTCTTCGGCCACCACCACACGGACAGTTTCCGTGTCTT
CTACGATGATGAAGGATCAGCCGTTAGCTCGATGTTCCTGTGTCCTGCCG
TGACCCCGTGGAAGACGACCCTGCCCGGCATAAGCGGGTTCGGCGCCAAC
AACCCTGGTGTCAGGCTGTACAAGTACGACAGACAGACGCTACAAATTAA
GGTGAATTGAATGTTTCTCCTGCTTGTGGTGTTTGTGTGCGCCCAGAGTG
CGGCTGGGGAGGACGGCTGGTTTTGGCAGGTGACAGATTTCCACTATGAC
CCCCGCTACTCCACCGCCGGGGTCCCGGGCGCGATGTGCCACGAGTCGGG
CGGGCGGCAGGACGGCTCCCCGGGGGTGTGGGGAGACTACCTGTGTGACG
CTCCCTGGGCGCTGATCAACTCTTCAGTGTACGCCATGAGACAAATAGAA
CCCAACCCTGACTTCATACTGTGGACGGGGGATGACACCCCGCATGTGCC
AAACGAAGAGCTCGGACAGCAGGTTGTCATCAACATCATCGGTAACCTGA
CGTCACTACTGAAGGAGGTCTTTCCGACCAAGAGGGTGTACGCAGCCCTC
GGTAACCATGACTACCACCCTAAGAACCAGTTACCGCCCAGCGGGAGTGA
CATCTACGACGCCGTTGCCGAGTTCTGGCGGGACTGGATGGATGACGACA
CGGCCAAAAACGTCTTCAAGCAAGGTGGTTACTACGCGGTGTCCCATGCT
CCTCACCTGCGCATTGTTAGCGTGAACACCAACCTCCACTACAGGTCTAA
CCTGGTGACTAAAGACAGGGAGGATCCGGGCGGACACTTCGCCTGGCTGG
ACCGAGTGCTTAGCGACGCACAAACCAACTCAGAAATGGTTTTTATTGTC
GGACACCTGCCACCTGGATTCTTCGAGTTGAAGAGAAGCCAGTATTGGAT
GTACCCGAACTTTAACGAGCGTTACAACGAACTCGTTCGGAAGCATTCGG
CAGTCATCGCGGGACAGTTCTTCGGCCACCACCACACGGACAGTTTCCGT
GTCTTCTACGATGATGAAGGATCAGCCGTTAGCTCGATGTTCCTGTGTCC
TGCCGTGACCCCGTGGAAGACGACCCTGCCCGGCATAAGCGGGTTCGGCG
CCAACAACCCTGGTGTCAGGCTGTACAAGTACGACAGACAGACGCTACAA
ATTAAGGTGAATTGAATGTTTCTCCTGCTTGTGGTGTTTGTGTGCGCCCA
GAGTGCGGCTGGGGAGGACGGCTGGTTTTGGCAGGTGACAGATTTCCACT
ATGACCCCCGCTACTCCACCGCCGGGGTCCCGGGCGCGATGTGCCACGAG
TCGGGCGGGCGGCAGGACGGCTCCCCGGGGGTGTGGGGAGACTACCTGTG
TGACGCTCCCTGGGCGCTGATCAACTCTTCAGTGTACGCCATGAGACAAA
TAGAACCCAACCCTGACTTCATACTGTGGACGGGGGATGACACCCCGCAT
GTGCCAAACGAAGAGCTCGGACAGCAGGTTGTCATCAACATCATCGGTAA
CCTGACGTCACTACTGAAGGAGGTCTTTCCGACCAAGAGGGTGTACGCAG
CCCTCGGTAACCATGACTACCACCCTAAGAACCAGTTACCGCCCAGCGGG
AGTGACATCTACGACGCCGTTGCCGAGTTCTGGCGGGACTGGATGGATGA
CGACACGGCCAAAAACGTCTTCAAGCAAGGTGGTTACTACGCGGTGTCCC
ATGCTCCTCACCTGCGCATTGTTAGCGTGAACACCAACCTCCACTACAGG
TCTAACCTGGTGACTAAAGACAGGGAGGATCCGGGCGGACACTTCGCCTG
GCTGGACCGAGTGCTTAGCGACGCACAAACCAACTCAGAAATGGTTTTTA
TTGTCGGACACCTGCCACCTGGATTCTTCGAGTTGAAGAGAAGCCAGTAT
TGGATGTACCCGAACTTTAACGAGCGTTACAACGAACTCGTTCGGAAGCA
TTCGGCAGTCATCGCGGGACAGTTCTTCGGCCACCACCACACGGACAGTT
TCCGTGTCTTCTACGATGATGAAGGATCAGCCGTTAGCTCGATGTTCCTG
TGTCCTGCCGTGACCCCGTGGAAGACGACCCTGCCCGGCATAAGCGGGTT
CGGCGCCAACAACCCTGGTGTCAGGCTGTACAAGTACGACAGACAGACGC
TACAAATTAAGGTGAATTGAATGTTTCTCCTGCTTGTGGTGTTTGTGTGC
GCCCAGAGTGCGGCTGGGGAGGACGGCTGGTTTTGGCAGGTGACAGATTT
CCACTATGACCCCCGCTACTCCACCGCCGGGGTCCCGGGCGCGATGTGCC
ACGAGTCGGGCGGGCGGCAGGACGGCTCCCCGGGGGTGTGGGGAGACTAC
CTGTGTGACGCTCCCTGGGCGCTGATCAACTCTTCAGTGTACGCCATGAG
ACAAATAGAACCCAACCCTGACTTCATACTGTGGACGGGGGATGACACCC
CGCATGTGCCAAACGAAGAGCTCGGACAGCAGGTTGTCATCAACATCATC
GGTAACCTGACGTCACTACTGAAGGAGGTCTTTCCGACCAAGAGGGTGTA
CGCAGCCCTCGGTAACCATGACTACCACCCTAAGAACCAGTTACCGCCCA
GCGGGAGTGACATCTACGACGCCGTTGCCGAGTTCTGGCGGGACTGGATG
GATGACGACACGGCCAAAAACGTCTTCAAGCAAGGTGGTTACTACGCGGT
GTCCCATGCTCCTCACCTGCGCATTGTTAGCGTGAACACCAACCTCCACT
ACAGGTCTAACCTGGTGACTAAAGACAGGGAGGATCCGGGCGGACACTTC
GCCTGGCTGGACCGAGTGCTTAGCGACGCACAAACCAACTCAGAAATGGT
TTTTATTGTCGGACACCTGCCACCTGGATTCTTCGAGTTGAAGAGAAGCC
AGTATTGGATGTACCCGAACTTTAACGAGCGTTACAACGAACTCGTTCGG
AAGCATTCGGCAGTCATCGCGGGACAGTTCTTCGGCCACCACCACACGGA
CAGTTTCCGTGTCTTCTACGATGATGAAGGATCAGCCGTTAGCTCGATGT
TCCTGTGTCCTGCCGTGACCCCGTGGAAGACGACCCTGCCCGGCATAAGC
GGGTTCGGCGCCAACAACCCTGGTGTCAGGCTGTACAAGTACGACAGACA
GACGCTACAAATTAAGGTGAATTGAATGTTTCTCCTGCTTGTGGTGTTTG
TGTGCGCCCAGAGTGCGGCTGGGGAGGACGGCTGGTTTTGGCAGGTGACA
GATTTCCACTATGACCCCCGCTACTCCACCGCCGGGGTCCCGGGCGCGAT
GTGCCACGAGTCGGGCGGGCGGCAGGACGGCTCCCCGGGGGTGTGGGGAG
ACTACCTGTGTGACGCTCCCTGGGCGCTGATCAACTCTTCAGTGTACGCC
ATGAGACAAATAGAACCCAACCCTGACTTCATACTGTGGACGGGGGATGA
CACCCCGCATGTGCCAAACGAAGAGCTCGGACAGCAGGTTGTCATCAACA
TCATCGGTAACCTGACGTCACTACTGAAGGAGGTCTTTCCGACCAAGAGG
GTGTACGCAGCCCTCGGTAACCATGACTACCACCCTAAGAACCAGTTACC
GCCCAGCGGGAGTGACATCTACGACGCCGTTGCCGAGTTCTGGCGGGACT
GGATGGATGACGACACGGCCAAAAACGTCTTCAAGCAAGGTGGTTACTAC
GCGGTGTCCCATGCTCCTCACCTGCGCATTGTTAGCGTGAACACCAACCT
CCACTACAGGTCTAACCTGGTGACTAAAGACAGGGAGGATCCGGGCGGAC
ACTTCGCCTGGCTGGACCGAGTGCTTAGCGACGCACAAACCAACTCAGAA
ATGGTTTTTATTGTCGGACACCTGCCACCTGGATTCTTCGAGTTGAAGAG
AAGCCAGTATTGGATGTACCCGAACTTTAACGAGCGTTACAACGAACTCG
TTCGGAAGCATTCGGCAGTCATCGCGGGACAGTTCTTCGGCCACCACCAC
ACGGACAGTTTCCGTGTCTTCTACGATGATGAAGGATCAGCCGTTAGCTC
GATGTTCCTGTGTCCTGCCGTGACCCCGTGGAAGACGACCCTGCCCGGCA
TAAGCGGGTTCGGCGCCAACAACCCTGGTGTCAGGCTGTACAAGTACGAC
AGACAGACGCTACAAATTAAGGTGAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000076 | genome | Sc0000076:573321..576798 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95628_evm3 |
| Biotype | protein_coding |
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