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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95616_evm1 >transcript:BL95616_evm1-protein ID=transcript:BL95616_evm1-protein|Name=transcript:BL95616_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=251bp
MPTQTEKAFKPGSTCPPPPGPGKLRLYSMRFCPYAERTRLFLAAKGIEYE
TINISVLSEKPDWFFEKTPLGKVPVLEKDGKIVYESLVCNEYLDGIYPDK
CITPSDPLEKARQSMVLALWDSKVIGFYYKLILTKDRDEWPAVAKQLVDG
MQSIENALTQPFFSGDKAGALDYNLWPWFERFSMLKDRGVELQEKRFPKL
TAWKEHMLELPEVKACYFPPEVQEQFGKSWMEDTPDYDIGGTPDYDIGLK
E Run BLAST on NCBI mRNA from alignment at Sc0000074:807369..810903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95616_evm1 ID=transcript:BL95616_evm1|Name=transcript:BL95616_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3535bp|location=Sequence derived from alignment at Sc0000074:807369..810903+ (Branchiostoma lanceolatum)
ATGCCGACTCAGACCGAAAAGGCCTTCAAACCAGGTTAGTAGCGGTAGTT
ATAGTTTTCACGTTCCGAGGTCACGAACTGCTGCAGTATAATCATTCACC
GTGTTGTATTATTACAGCCAGTAGATACGCATTTGAATGAGGCTGTTGTA
AAGTGCTCGAGACACCTCCTCGAATACAGGATCCACAATTTACGTATCTT
CCGAAAGACGGCCGCTCTAACAAGGATTCCCTTCCCTGAGATTCGAACCG
GGGTGTCCCAGTTACCAGAAATTGAATCCCGAGGCTCAACTTATGCCACT
TGAATGAGCACTGAAGCCAGTTAAGATTCTAAACGTAACTACTGTTTTTG
AACTAAGAAAGGGTAATATATCCTCAACTGAGGTGAAGCATGGTTAGCCT
CCGTTGCGGCTCCTTCCGGCTGTTTTCATTTTCTAAGTTCCAGTTTTACT
ATTACATTTTTTTCTTGTTGTTGCCCGGCCAGCAATAAAGAAAAATGAAA
TAGTTTAAAAACAATAACTTGAAAAAGAAAACAGCCGGGAGGAGTCTGCA
TCGGAGGCTAAAGCATGGTGCTTTTTACATAGCTAGCGGTAGTCAGTATT
GCAATGTGGCCTCACCACATCTTATTTCAGCCTAGCACTCAGGGTCACCC
ATAAATTTCTCCCTTTAAGTGGGCTGGTTTCTTTTTACACCTGAGGTCAG
GGTTCACACCTGAGCCAGTAAACCTTCTAAAGTGCCTCCATACACCGGAC
AACTGTCTTTACGGCCCCATCCGAAATGACTAATGCAACCCCTCAGGCTG
TGCCGGAGCGGGGTTCCAACCTCTATGATACATGTACGTGATTGTTTGTG
ATATATTTGTCTTTGTCTGATTTTCAGGTTCCACCTGCCCCCCTCCCCCC
GGACCAGGCAAACTCCGTCTGTACAGTATGAGGTTCTGTCCGTACGCAGA
GCGGACACGTCTGTTCCTCGCTGCCAAGGGAATAGAGTGAGTCAATGCAA
TGGAATCTAATTAATAAACAACCACTAGTAGATGATTATTAACACTAGTA
TGCTGCCCCTACGGCTGACTAAGCTATGGGAGGAGAGAGTGAGTGAGTGA
GTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGT
GAGTGAGTGAGTGAGTGAGTGAGTGAAGATGCTTAAATACAGGGCAAATA
AACGCCACTCGCATGATCATATAAAAAGATTGTAGATTATGACTAAAACT
GAGGTTTAACTTAATCTCAGTCTTTTGTAATTCTAAATTGCTGTCATAAC
AGTCTTTTTATTTTGCAAAAATGATTTGTCATTGCGTTTTGATTTTTCAA
ATCATTACCAATAGATTCATGAATGGGCTGATATTCATTAAACCACTGGT
ATTACGTATACAACCAATTCTTTGGCAAAATGTCTTACTATGTAGCCCTT
TCCTGAAATACAATGTTCTTTCACATGGGTGCGGACATGCGTATAGTCAA
GTTCGTATGAGTTTCGTATTTCGTATTATTACCCACCGTTGTGCAGCACG
GTTATCGAACCGAGAAAAAAATACTTCTTTGGCTGAAAACTGAACCAAAG
ACAACAAAAAATGTCTACACGGAACTCATATGGACATGAATATACGCTAT
TACGTATACAATTGTGTGAACCCCATTAAACAAAGGATGACATGTTCTTA
CATATAATGTAAAGAGTTAACTACGATGGAATTGGAAAACTTTGTAAATT
CTACACGTGTCAAAAAGAGAGAGGACGCGTGTAAACTATAGGTAGAGATA
AGACATAGCATAGTTTTACTATTACTCTCTTGTACCTAACTTACTGCATT
TAACCCCAATGGGGCATGGATTAAGGGTTAATGACCCGCCCCGAGGTGTA
TATGGTGTCATAACGCCTGGCTATGTGCTATAACCACCGAATAAAACCAC
CGAGTGAGCGAAACTAAAATTTCCACAGAGAACATTTCATAACATTGCAA
TCTTGGCATACAAATCTTTTTCAAATCTATACTCTACTCCACTCTGCAGG
ACACCCAGGAGGGACGAATAATGATTATCATTCCTCCCTTCTGGGTGTCC
TTCTGATTGGTCAACATCATTTAACACCACTTGAGATTCATTCCGGCACC
ACTTGTGGGACTTCTATGGCATTATGGCGTCATAACCGATATGGAATTGA
GGCTTCTTATTAGTCGACGCCATCTGGCCATGTGATAATATGCAATAAAC
GTCATTGTCAATGCCATTGATATAACTTTTTCAACTCTTTCCTAACCCCT
CAAGATACGAGACGATCAACATTAGTGTCTTGTCAGAGAAACCAGACTGG
TTCTTTGAAAAGACCCCACTGGGTAAGGTTCCTGTGTTGGAGAAGGATGG
GAAGATCGTGTACGAGTCTCTGGTCTGTAACGAGTACCTGGATGGAATCT
ACCCCGACAAATGTATCACTCCGAGCGACCCTTTGGAGAAGGCACGTCAG
AGCATGGTTCTGGCCCTCTGGGATTCAAAGGTACGACTTTTGTTATCTCC
ATGAAATGAAGATATTGCTTTGAGCGTGTCTGTGTTTGTGTTTGCGCGCG
TGTTTGTGTGTGCTTGTGTCCGGATGCTTAAATTGTAGTCAGCATAACTC
AAGAACGTCTGGATGGATTGTAATGATAATTGGGATGTGGGTAGGAGTTG
GGAGGAGAAAGGTCAAGGTTGATTTTGGGCCCCCTGGTATTAGACCTTGC
TACTGCAACAGAAGTTCATTTTTTTGCATCTTTTGATCTGAACATGCTAT
GGTCTTTCTTTTTGGATGGCAGATAGCTTGTGATGTCAGGAAGAAGTGCA
GCTGTAGATTTGGGTCCCCTAGCGGCTTGCTCTGGAACTGCATTGGCGTT
TTTGTCAAAATCTTCCAAGGAGAATAACTGAAAAGGAACGACGGATTTCC
ATCATATTTAATATGCAGTAAGCTTAGACAGATGCACATAATGAAGTTAT
ACATAATAAGTACGACAGTTCAAAAATGCAACATACATAACTGAGAAATG
AAGGGACATTGATAGATAAGTTATGCAAATGAAGACCTAATTTGCATAAT
TGAAAATTAAAGTGGCCAGTAAACCATCTTTACATCATGTTCCTACAGGT
GATCGGATTCTACTACAAGTTGATTCTCACAAAGGATCGGGACGAGTGGC
CAGCCGTGGCCAAGCAGCTAGTCGACGGCATGCAGTCCATCGAGAACGCC
CTGACACAACCGTTCTTCTCCGGCGACAAGGCCGGCGCGCTGGACTACAA
CCTCTGGCCGTGGTTCGAGCGATTCTCCATGCTGAAAGACCGCGGGGTTG
AACTACAGGAAAAGAGGTTTCCCAAGCTCACCGCGTGGAAAGAACACATG
TTGGAGTTGCCTGAAGTCAAGGCCTGCTACTTTCCTCCTGAAGTTCAGGA
GCAGTTTGGGAAATCGTGGATGGAAGACACACCTGATTATGACATTGGNG
GCACACCTGACTATGACATTGGATTGAAGGAATAA Coding sequence (CDS) from alignment at Sc0000074:807369..810903+ >transcript:BL95616_evm1 ID=transcript:BL95616_evm1|Name=transcript:BL95616_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3024bp|location=Sequence derived from alignment at Sc0000074:807369..810903+ (Branchiostoma lanceolatum)
ATGCCGACTCAGACCGAAAAGGCCTTCAAACCAGGTTCCACCTGCCCCCC
TCCCCCCGGACCAGGCAAACTCCGTCTGTACAGTATGAGGTTCTGTCCGT
ACGCAGAGCGGACACGTCTGTTCCTCGCTGCCAAGGGAATAGAATACGAG
ACGATCAACATTAGTGTCTTGTCAGAGAAACCAGACTGGTTCTTTGAAAA
GACCCCACTGGGTAAGGTTCCTGTGTTGGAGAAGGATGGGAAGATCGTGT
ACGAGTCTCTGGTCTGTAACGAGTACCTGGATGGAATCTACCCCGACAAA
TGTATCACTCCGAGCGACCCTTTGGAGAAGGCACGTCAGAGCATGGTTCT
GGCCCTCTGGGATTCAAAGGTGATCGGATTCTACTACAAGTTGATTCTCA
CAAAGGATCGGGACGAGTGGCCAGCCGTGGCCAAGCAGCTAGTCGACGGC
ATGCAGTCCATCGAGAACGCCCTGACACAACCGTTCTTCTCCGGCGACAA
GGCCGGCGCGCTGGACTACAACCTCTGGCCGTGGTTCGAGCGATTCTCCA
TGCTGAAAGACCGCGGGGTTGAACTACAGGAAAAGAGGTTTCCCAAGCTC
ACCGCGTGGAAAGAACACATGTTGGAGTTGCCTGAAGTCAAGGCCTGCTA
CTTTCCTCCTGAAGTTCAGGAGCAGTTTGGGAAATCGTGGATGGAAGACA
CACCTGATTATGACATTGGNGGCACACCTGACTATGACATTGGATTGAAG
GAATAAATGCCGACTCAGACCGAAAAGGCCTTCAAACCAGGTTCCACCTG
CCCCCCTCCCCCCGGACCAGGCAAACTCCGTCTGTACAGTATGAGGTTCT
GTCCGTACGCAGAGCGGACACGTCTGTTCCTCGCTGCCAAGGGAATAGAA
TACGAGACGATCAACATTAGTGTCTTGTCAGAGAAACCAGACTGGTTCTT
TGAAAAGACCCCACTGGGTAAGGTTCCTGTGTTGGAGAAGGATGGGAAGA
TCGTGTACGAGTCTCTGGTCTGTAACGAGTACCTGGATGGAATCTACCCC
GACAAATGTATCACTCCGAGCGACCCTTTGGAGAAGGCACGTCAGAGCAT
GGTTCTGGCCCTCTGGGATTCAAAGGTGATCGGATTCTACTACAAGTTGA
TTCTCACAAAGGATCGGGACGAGTGGCCAGCCGTGGCCAAGCAGCTAGTC
GACGGCATGCAGTCCATCGAGAACGCCCTGACACAACCGTTCTTCTCCGG
CGACAAGGCCGGCGCGCTGGACTACAACCTCTGGCCGTGGTTCGAGCGAT
TCTCCATGCTGAAAGACCGCGGGGTTGAACTACAGGAAAAGAGGTTTCCC
AAGCTCACCGCGTGGAAAGAACACATGTTGGAGTTGCCTGAAGTCAAGGC
CTGCTACTTTCCTCCTGAAGTTCAGGAGCAGTTTGGGAAATCGTGGATGG
AAGACACACCTGATTATGACATTGGNGGCACACCTGACTATGACATTGGA
TTGAAGGAATAAATGCCGACTCAGACCGAAAAGGCCTTCAAACCAGGTTC
CACCTGCCCCCCTCCCCCCGGACCAGGCAAACTCCGTCTGTACAGTATGA
GGTTCTGTCCGTACGCAGAGCGGACACGTCTGTTCCTCGCTGCCAAGGGA
ATAGAATACGAGACGATCAACATTAGTGTCTTGTCAGAGAAACCAGACTG
GTTCTTTGAAAAGACCCCACTGGGTAAGGTTCCTGTGTTGGAGAAGGATG
GGAAGATCGTGTACGAGTCTCTGGTCTGTAACGAGTACCTGGATGGAATC
TACCCCGACAAATGTATCACTCCGAGCGACCCTTTGGAGAAGGCACGTCA
GAGCATGGTTCTGGCCCTCTGGGATTCAAAGGTGATCGGATTCTACTACA
AGTTGATTCTCACAAAGGATCGGGACGAGTGGCCAGCCGTGGCCAAGCAG
CTAGTCGACGGCATGCAGTCCATCGAGAACGCCCTGACACAACCGTTCTT
CTCCGGCGACAAGGCCGGCGCGCTGGACTACAACCTCTGGCCGTGGTTCG
AGCGATTCTCCATGCTGAAAGACCGCGGGGTTGAACTACAGGAAAAGAGG
TTTCCCAAGCTCACCGCGTGGAAAGAACACATGTTGGAGTTGCCTGAAGT
CAAGGCCTGCTACTTTCCTCCTGAAGTTCAGGAGCAGTTTGGGAAATCGT
GGATGGAAGACACACCTGATTATGACATTGGNGGCACACCTGACTATGAC
ATTGGATTGAAGGAATAAATGCCGACTCAGACCGAAAAGGCCTTCAAACC
AGGTTCCACCTGCCCCCCTCCCCCCGGACCAGGCAAACTCCGTCTGTACA
GTATGAGGTTCTGTCCGTACGCAGAGCGGACACGTCTGTTCCTCGCTGCC
AAGGGAATAGAATACGAGACGATCAACATTAGTGTCTTGTCAGAGAAACC
AGACTGGTTCTTTGAAAAGACCCCACTGGGTAAGGTTCCTGTGTTGGAGA
AGGATGGGAAGATCGTGTACGAGTCTCTGGTCTGTAACGAGTACCTGGAT
GGAATCTACCCCGACAAATGTATCACTCCGAGCGACCCTTTGGAGAAGGC
ACGTCAGAGCATGGTTCTGGCCCTCTGGGATTCAAAGGTGATCGGATTCT
ACTACAAGTTGATTCTCACAAAGGATCGGGACGAGTGGCCAGCCGTGGCC
AAGCAGCTAGTCGACGGCATGCAGTCCATCGAGAACGCCCTGACACAACC
GTTCTTCTCCGGCGACAAGGCCGGCGCGCTGGACTACAACCTCTGGCCGT
GGTTCGAGCGATTCTCCATGCTGAAAGACCGCGGGGTTGAACTACAGGAA
AAGAGGTTTCCCAAGCTCACCGCGTGGAAAGAACACATGTTGGAGTTGCC
TGAAGTCAAGGCCTGCTACTTTCCTCCTGAAGTTCAGGAGCAGTTTGGGA
AATCGTGGATGGAAGACACACCTGATTATGACATTGGNGGCACACCTGAC
TATGACATTGGATTGAAGGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000074 | genome | Sc0000074:807369..810903 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95616_evm1 |
| Biotype | protein_coding |
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