|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95611_evm0 >transcript:BL95611_evm0-protein ID=transcript:BL95611_evm0-protein|Name=transcript:BL95611_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=287bp
MLTLLKLLPFIITFILYFALLLPDKPPSAEATVVKMLPAMCLVLFLGLHG
KVFCGGRLYDRLMFAATFLCGVADGVIAWDHHHDAFFLAGMAVFGVAHCV
FMAAFRCTPLRLILTIPFLIAGIILYGVLAPGLNGAMYFFVLLYALVIAG
MGWRSFSRVEIRCCLGCCRDDRCAKCVDLGDSEAADPDGRCCEASGVKWT
QVIAAIGAVLFAISDSILSIFAFRVPGDPYPVHRRVAVLSTYWVAILFLA
LSVEPAEPCPCQGQGERVTSAEDDDVSTERIRLEVTA Run BLAST on NCBI mRNA from alignment at Sc0000072:333051..334852- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95611_evm0 ID=transcript:BL95611_evm0|Name=transcript:BL95611_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1802bp|location=Sequence derived from alignment at Sc0000072:333051..334852- (Branchiostoma lanceolatum)
ATGCTGACGTTGTTAAAACTGCTGCCCTTCATCATCACGTTTATCCTGTA
CTTCGCGCTGTTGCTGCCTGACAAACCACCTTCAGCAGAGGCCACAGTCG
TCAAGATGCTGCCTGCCATGTGCCTGGTACTTTTCCTGGGCCTTCATGGA
AAAGGTACGTAACGGTCTGATCTGATGGTAAAGTGTTGTGAAGATAATCT
ATCCGTGAGACATGGCCACATGTACAAGAAATGGAATCACCACATAAACC
ATCGAATTAGCCAAGTTGTACTATTTCTTTCCAGTGCTGAAATTTCCTGT
TGAACGGTTCCTTCCGCATTGTTCCCATTTTTTGTTTTTACGAACTTGTG
TGAAGTATACTTTCTTTACTTGATGAGTCTTCCCTATCATGTCTTGTGAA
GAGTTGCGATGTGAGTTGCTCTCTCCCGCAGTGTTCTGTGGTGGGCGGCT
GTACGACCGTCTCATGTTCGCGGCCACGTTCTTGTGCGGAGTGGCGGACG
GGGTCATCGCCTGGGACCACCACCACGACGCCTTTTTCCTAGCAGGTCAG
ATGATGCATTTTTCGAGACAAATATGTGCTTCGCATTTTATGAATCTGAC
ACGGATATTCATCATGTTCTTGTGGGTCCCGGCGCAATAATACTACTAGT
ATAATGTGTATCTATACATACATACATACATACATACATACATACATACA
TACATACATATGGGTGATCGCTGGTTCTCCTCTGGAAACCGAATGAAAGG
CGTAGGCGTGGTCGCTCGTCGTTGACACTAAAGAAAGTAATCGAAGGGGA
TGTTGGCGTCAAAGATGAGGAACTTCGATCTGTCTTGTGCGACAGGAACT
TATGGAAACACTTGTATCACCTCCAAAAAGAGGGTGATCTGAACTGAACT
GATACATATACATTTCCAATTGTACAACATTAATGGCATGTACTGACTTT
GATTTAAAAAAGTCAGTAAACCATTGCATCTCTTACAGGAATGGCCGTGT
TTGGAGTCGCACACTGTGTGTTCATGGCTGCGTTCCGCTGCACACCCCTC
CGCCTCATCCTCACCATTCCTTTCCTCATAGCCGGCATCATCCTGTACGG
TGTCCTCGCGCCCGGTCTGAACGGGGCCATGTACTTTTTCGTCTTGCTCT
ACGCTCTGGTGATTGCTGGGATGGGGTGGAGATCTTTCTCCAGGGTTGAG
ATCCGGTGTTGTCTCGGGTGCTGCAGGGATGACAGATGTGCGAAGTGTGT
GGACTTGGGAGACAGTGAAGCTGCTGACCCCGATGGACGGTGCTGCGAGG
CGTCCGGGGTGAAGTGGACTCAGGTCATCGCGGCAATAGGTAAGGATCTA
CCTCGAGATGACGGTTAAAACGCACTGAGTAACTCTTACGCTTATCAAGC
ATCAAAACATGATATTGACTTCCATGGAAAATATTAATCTCATACTCCTT
TTGCTGCTGATGGATTAATAATGATCCGTTCAGAAAATTATGTTTACTGA
TTGCAGAAATAGAAAAGAAGAAGCTGTCTCATGTCCTTATCTTGTCCCGT
GCTACAGGTGCTGTACTGTTCGCCATCTCCGACTCTATCTTGTCCATTTT
CGCATTCCGCGTACCGGGGGATCCGTACCCGGTCCATAGGAGAGTGGCTG
TTCTGTCCACATACTGGGTCGCCATCTTGTTTCTGGCGTTATCCGTAGAA
CCAGCAGAACCATGTCCCTGTCAAGGTCAAGGGGAGAGGGTGACGTCAGC
AGAGGACGATGACGTCTCAACAGAACGGATCCGTCTGGAGGTAACGGCCT
AG Coding sequence (CDS) from alignment at Sc0000072:333051..334852- >transcript:BL95611_evm0 ID=transcript:BL95611_evm0|Name=transcript:BL95611_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3456bp|location=Sequence derived from alignment at Sc0000072:333051..334852- (Branchiostoma lanceolatum)
ATGCTGACGTTGTTAAAACTGCTGCCCTTCATCATCACGTTTATCCTGTA
CTTCGCGCTGTTGCTGCCTGACAAACCACCTTCAGCAGAGGCCACAGTCG
TCAAGATGCTGCCTGCCATGTGCCTGGTACTTTTCCTGGGCCTTCATGGA
AAAGTGTTCTGTGGTGGGCGGCTGTACGACCGTCTCATGTTCGCGGCCAC
GTTCTTGTGCGGAGTGGCGGACGGGGTCATCGCCTGGGACCACCACCACG
ACGCCTTTTTCCTAGCAGGAATGGCCGTGTTTGGAGTCGCACACTGTGTG
TTCATGGCTGCGTTCCGCTGCACACCCCTCCGCCTCATCCTCACCATTCC
TTTCCTCATAGCCGGCATCATCCTGTACGGTGTCCTCGCGCCCGGTCTGA
ACGGGGCCATGTACTTTTTCGTCTTGCTCTACGCTCTGGTGATTGCTGGG
ATGGGGTGGAGATCTTTCTCCAGGGTTGAGATCCGGTGTTGTCTCGGGTG
CTGCAGGGATGACAGATGTGCGAAGTGTGTGGACTTGGGAGACAGTGAAG
CTGCTGACCCCGATGGACGGTGCTGCGAGGCGTCCGGGGTGAAGTGGACT
CAGGTCATCGCGGCAATAGGTGCTGTACTGTTCGCCATCTCCGACTCTAT
CTTGTCCATTTTCGCATTCCGCGTACCGGGGGATCCGTACCCGGTCCATA
GGAGAGTGGCTGTTCTGTCCACATACTGGGTCGCCATCTTGTTTCTGGCG
TTATCCGTAGAACCAGCAGAACCATGTCCCTGTCAAGGTCAAGGGGAGAG
GGTGACGTCAGCAGAGGACGATGACGTCTCAACAGAACGGATCCGTCTGG
AGGTAACGGCCTAGATGCTGACGTTGTTAAAACTGCTGCCCTTCATCATC
ACGTTTATCCTGTACTTCGCGCTGTTGCTGCCTGACAAACCACCTTCAGC
AGAGGCCACAGTCGTCAAGATGCTGCCTGCCATGTGCCTGGTACTTTTCC
TGGGCCTTCATGGAAAAGTGTTCTGTGGTGGGCGGCTGTACGACCGTCTC
ATGTTCGCGGCCACGTTCTTGTGCGGAGTGGCGGACGGGGTCATCGCCTG
GGACCACCACCACGACGCCTTTTTCCTAGCAGGAATGGCCGTGTTTGGAG
TCGCACACTGTGTGTTCATGGCTGCGTTCCGCTGCACACCCCTCCGCCTC
ATCCTCACCATTCCTTTCCTCATAGCCGGCATCATCCTGTACGGTGTCCT
CGCGCCCGGTCTGAACGGGGCCATGTACTTTTTCGTCTTGCTCTACGCTC
TGGTGATTGCTGGGATGGGGTGGAGATCTTTCTCCAGGGTTGAGATCCGG
TGTTGTCTCGGGTGCTGCAGGGATGACAGATGTGCGAAGTGTGTGGACTT
GGGAGACAGTGAAGCTGCTGACCCCGATGGACGGTGCTGCGAGGCGTCCG
GGGTGAAGTGGACTCAGGTCATCGCGGCAATAGGTGCTGTACTGTTCGCC
ATCTCCGACTCTATCTTGTCCATTTTCGCATTCCGCGTACCGGGGGATCC
GTACCCGGTCCATAGGAGAGTGGCTGTTCTGTCCACATACTGGGTCGCCA
TCTTGTTTCTGGCGTTATCCGTAGAACCAGCAGAACCATGTCCCTGTCAA
GGTCAAGGGGAGAGGGTGACGTCAGCAGAGGACGATGACGTCTCAACAGA
ACGGATCCGTCTGGAGGTAACGGCCTAGATGCTGACGTTGTTAAAACTGC
TGCCCTTCATCATCACGTTTATCCTGTACTTCGCGCTGTTGCTGCCTGAC
AAACCACCTTCAGCAGAGGCCACAGTCGTCAAGATGCTGCCTGCCATGTG
CCTGGTACTTTTCCTGGGCCTTCATGGAAAAGTGTTCTGTGGTGGGCGGC
TGTACGACCGTCTCATGTTCGCGGCCACGTTCTTGTGCGGAGTGGCGGAC
GGGGTCATCGCCTGGGACCACCACCACGACGCCTTTTTCCTAGCAGGAAT
GGCCGTGTTTGGAGTCGCACACTGTGTGTTCATGGCTGCGTTCCGCTGCA
CACCCCTCCGCCTCATCCTCACCATTCCTTTCCTCATAGCCGGCATCATC
CTGTACGGTGTCCTCGCGCCCGGTCTGAACGGGGCCATGTACTTTTTCGT
CTTGCTCTACGCTCTGGTGATTGCTGGGATGGGGTGGAGATCTTTCTCCA
GGGTTGAGATCCGGTGTTGTCTCGGGTGCTGCAGGGATGACAGATGTGCG
AAGTGTGTGGACTTGGGAGACAGTGAAGCTGCTGACCCCGATGGACGGTG
CTGCGAGGCGTCCGGGGTGAAGTGGACTCAGGTCATCGCGGCAATAGGTG
CTGTACTGTTCGCCATCTCCGACTCTATCTTGTCCATTTTCGCATTCCGC
GTACCGGGGGATCCGTACCCGGTCCATAGGAGAGTGGCTGTTCTGTCCAC
ATACTGGGTCGCCATCTTGTTTCTGGCGTTATCCGTAGAACCAGCAGAAC
CATGTCCCTGTCAAGGTCAAGGGGAGAGGGTGACGTCAGCAGAGGACGAT
GACGTCTCAACAGAACGGATCCGTCTGGAGGTAACGGCCTAGATGCTGAC
GTTGTTAAAACTGCTGCCCTTCATCATCACGTTTATCCTGTACTTCGCGC
TGTTGCTGCCTGACAAACCACCTTCAGCAGAGGCCACAGTCGTCAAGATG
CTGCCTGCCATGTGCCTGGTACTTTTCCTGGGCCTTCATGGAAAAGTGTT
CTGTGGTGGGCGGCTGTACGACCGTCTCATGTTCGCGGCCACGTTCTTGT
GCGGAGTGGCGGACGGGGTCATCGCCTGGGACCACCACCACGACGCCTTT
TTCCTAGCAGGAATGGCCGTGTTTGGAGTCGCACACTGTGTGTTCATGGC
TGCGTTCCGCTGCACACCCCTCCGCCTCATCCTCACCATTCCTTTCCTCA
TAGCCGGCATCATCCTGTACGGTGTCCTCGCGCCCGGTCTGAACGGGGCC
ATGTACTTTTTCGTCTTGCTCTACGCTCTGGTGATTGCTGGGATGGGGTG
GAGATCTTTCTCCAGGGTTGAGATCCGGTGTTGTCTCGGGTGCTGCAGGG
ATGACAGATGTGCGAAGTGTGTGGACTTGGGAGACAGTGAAGCTGCTGAC
CCCGATGGACGGTGCTGCGAGGCGTCCGGGGTGAAGTGGACTCAGGTCAT
CGCGGCAATAGGTGCTGTACTGTTCGCCATCTCCGACTCTATCTTGTCCA
TTTTCGCATTCCGCGTACCGGGGGATCCGTACCCGGTCCATAGGAGAGTG
GCTGTTCTGTCCACATACTGGGTCGCCATCTTGTTTCTGGCGTTATCCGT
AGAACCAGCAGAACCATGTCCCTGTCAAGGTCAAGGGGAGAGGGTGACGT
CAGCAGAGGACGATGACGTCTCAACAGAACGGATCCGTCTGGAGGTAACG
GCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000072 | genome | Sc0000072:333051..334852 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95611_evm0 |
| Biotype | protein_coding |
|
