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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95610_evm1 >transcript:BL95610_evm1-protein ID=transcript:BL95610_evm1-protein|Name=transcript:BL95610_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=212bp
MSQPSFYSPHLSWPTTPSCGSVANGVIRVPAHRPAPPPLNAHFPWMDQRA
RLAKEGLAVPPFTVTRRIGHPYQNRTPPKRKKPRTSFTRLQICELEKRFH
KQKYLASAERAQLATQLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQA
NRMLLQLQAEAAKNMPQTYDPICAYNASLHALQSLQPWAENKPDPNRPAY
LNAPSLTTPTIC Run BLAST on NCBI mRNA from alignment at Sc0000072:233131..236395- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95610_evm1 ID=transcript:BL95610_evm1|Name=transcript:BL95610_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3265bp|location=Sequence derived from alignment at Sc0000072:233131..236395- (Branchiostoma lanceolatum)
ATGTCCCAGCCCAGTTTCTACTCCCCTCACCTCTCCTGGCCCACGACGCC
GTCCTGTGGCAGCGTGGCGAACGGCGTGATCAGAGTACCGGCCCACCGGC
CCGCGCCACCTCCCCTCAACGCGCACTTCCCGTGGATGGACCAACGGGCC
AGGCTCGCCAAGGAAGGTCTAGCAGGTCAGTCTGCACGTCTTAAAAGTGT
CACCCGGCTTGAGGAACCACTCCGGTCCTCAGCCTACAACATTTACCACT
TCCGCCTCGCTCTATTCGACCCATAAACCCAGGCAAGCCCGGGTGTTGAC
TGTGTTTGAAAACGGCTGACAGCGTCACTTCAGCGAACTCTTGTCGTAAA
AAAATAGGCCGACAGCGATGGGTAGCTTAGCTTTAAAGCCGGTCAGGTTG
TGCACTTTATACCTCACCGGTCCATTTTTTTTCTAAAAATATAGATGTTT
GGCTTTAACACTATTTATCTGAAGAGTTCAACAAGGGAACTCCATGACAA
CTGGAGGGATAGGGCAATCACAGTATAGCGGCGGCCGAGATCTTCGACGC
TTCCGGGTCTCGAGTCTCGTGGTCCTCGGCTTAGCACGCACTTTGAGCGA
AGGCCGTACAGCAGGGTGTTAGAGGGGTTAACATACATTTCCGAATATAC
GTAGCGACATTCTAGGCTAGAAACTGTGAGCCTGTATGACTGCCTTGTTT
GTGTGAAACTTTCGTTGTTTCAATTTTCTTTCCCTTTCTGTACGTGCAGT
GCCACCATTTACCGTTACACGGCGGATCGGGCACCCCTACCAGAACAGGA
CGCCACCCAAGAGAAAGAAACCGAGAACCTCCTTCACAAGGCTTCAAATC
TGCGAACTGGAGAAAAGATTCCACAAACAGAAATATTTGGCGTCGGCAGA
GAGGGCTCAACTCGCCACCCAACTCAAAATGACGGACGCCCAAGTCAAGA
CATGGTTTCAGAACAGAAGAACAAAGTGGAGGTAGATATACCTGTGTACT
ACTCTACTCCCTACATTCATACCACTCATATCCATTCTACCACCTAAGGA
AGTACATCTGTACTTAAACCGTAGCAGATTGATGGCATTTAGATTTGTTA
CCCCCATTTCTCTCTCATCCCCCCTTACCAGAATGACCGGTAGCCTTATC
TACTTTTCTGGCGTCGATCGGACAGTACCGACAGCAGACACCAACATGTA
TCTGTACTGTCGATCTCGTGCCCAGAAGCGCTTACAAATAGTCTCGCTAA
AGACTGAACATCTTCAGCTAATGGCAAGTGGTGTGGGCTCCAAAGTACCC
TCTAGTCTTATTTGTCAAGATTCAGACTTTAAAAGAAGGTAGTGGTGATG
GGANATTCAGACTTTAAAAGAAGGTTGTGGCGATGGGAGGAAAGATAAAA
GACGTTAGACTGAGGTTTAAGTTTGTGAGGTTCTTACAAGTTATTTGATC
TTCGCGAAAGCGTATATATTTTTACTACGAACGTTTAGACCTAAGACTAA
CCCCCTGATGTTGGCTGTTGGCAGTTAGGGCTCATTAAGTGAAGCCATAT
CCCAGCGGTTTCGTCAGATGAGTGTTTTAAGTCCACACGTTAGAGAGTTG
ACTACGCCGGTGGTTTCTCTGTAGCTGAACCGCACACATACATACGGCCA
CGGGGCGAGGAGTGGAATTCGTAGCCGAGGGCATGGCGGCGCTCAGGATG
GGGTCGTGGAAGGGACAATAGACCGTACGACCGAAAACAATACCCGCCAC
CCTTCATAGCCAGAGGGATAGCGTACGACAGATTTTCCTAGCATCTCCAC
CCTTTCCTTAGTAACCAAACCTTACCAACACGCTACCTGTCAAAATCTGG
GGATAAATGGCCCGCTATTTGCCTGTATCCTACCGAGCTATTTCTGACTA
ACGTTAAACCCTCGCAGGCTGCAAATCTAGGTAAGAAAGGCCGAGTAGGC
TCAGTAAGTTTCCTGTGAGCATACTTTATAACGTAGATACTCGTAAGACG
TGAAAACAACACCGTAAGGTAATGCTTACAATGGTCACCGTCTGATATAT
CAGAATGAGAACAGTTGTGTCGTGATAGAGTCAGGCAAAATCAAGTTCAG
AACTCGCCACCTGCCCCCCACCCCAGCATGATAGACACTTGCGTGCGAGG
GACCCGCGTCTGTTTTCTTGCTTTCAGACGGCTGCATCTTTCTCGTACCG
ACGTGACGATAGACAGAAACTCGGGCCAGACAACTTTCCCAACCTCTCCT
CTCGTCCATATTTGCTGTCAGTCCTTATTCTTTTTAAATTGCCAGCAAAA
TAAGACGAAACTTACAGAGAAAATGTACATTTCACAGCAAGAAATGGCCT
GATAGGCAAAGTACTTTATGTAGATCTGCAACAAAATGCATGCATTCTTT
TACTTTAACACGAGTTATATTCGGGGTCTCATAGTTTTCTTGCGAACAAA
TGATTAAGGCGGTTCCCTGGAATGGGAGATAACCATCTTCACTTGGAGGT
GCTTGAGTGGGTGATGTAGGAAGTCCATAGTAAATCTAAGAACATATCAT
CAAGAGGGAGAGAAAATAGATCAAGTTTAGTCTGGACGTATTTACAACTT
TTTCTACTCCATCCAAAATTCTTCCCTAGCTGCTCGCCCAGAATACTGTG
TCCGTTTAGTCTAGTGTTCTCTGCTTTTGTTTTTCGTGAAGCATTGTGCA
GTGAGTTTTTGTTCAGACTCGTGCNCGTGAAGCATTGTGCAGTGAGTTTT
TGTTCTGACTCGTGCATGTTGAGTATGCTGCAGATGGTATAGTCAGGTGG
TCGTCTCTGTAGGGGACACGGGAGAAACACGGGGTCTCAACAATCGGCAC
CACAGGTTCCCCCTCCAACCCCGCTGACTCTTTGTCATTCACATTTAATT
TCTAAGTGTGTGTGTTTTTGTGTGTGAGCGGCAGATACAGCCTATTGAAC
CCGTACAAACTTGTTGGTTTTACCCCCAAGTATTGTTTCCCCCAGATGTG
TACTATAACCGTATTCAAAAATACAANCTACAGGCGGCAGACAGCCGAGG
AGAGAGAGGCGGAGAGACAGCAGGCCAACAGAATGCTGCTGCAGCTACAA
GCGGAAGCAGCCAAGAACATGCCTCAGACTTACGATCCTATCTGTGCTTA
CAACGCGTCTTTGCACGCCCTACAATCGCTTCAACCGTGGGCAGAGAACA
AGCCCGACCCCAACCGGCCGGCCTACCTGAACGCACCCTCCCTCACCACG
CCAACGATCTGCTAG Coding sequence (CDS) from alignment at Sc0000072:233131..236395- >transcript:BL95610_evm1 ID=transcript:BL95610_evm1|Name=transcript:BL95610_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1917bp|location=Sequence derived from alignment at Sc0000072:233131..236395- (Branchiostoma lanceolatum)
ATGTCCCAGCCCAGTTTCTACTCCCCTCACCTCTCCTGGCCCACGACGCC
GTCCTGTGGCAGCGTGGCGAACGGCGTGATCAGAGTACCGGCCCACCGGC
CCGCGCCACCTCCCCTCAACGCGCACTTCCCGTGGATGGACCAACGGGCC
AGGCTCGCCAAGGAAGGTCTAGCAGTGCCACCATTTACCGTTACACGGCG
GATCGGGCACCCCTACCAGAACAGGACGCCACCCAAGAGAAAGAAACCGA
GAACCTCCTTCACAAGGCTTCAAATCTGCGAACTGGAGAAAAGATTCCAC
AAACAGAAATATTTGGCGTCGGCAGAGAGGGCTCAACTCGCCACCCAACT
CAAAATGACGGACGCCCAAGTCAAGACATGGTTTCAGAACAGAAGAACAA
AGTGGAGGCGGCAGACAGCCGAGGAGAGAGAGGCGGAGAGACAGCAGGCC
AACAGAATGCTGCTGCAGCTACAAGCGGAAGCAGCCAAGAACATGCCTCA
GACTTACGATCCTATCTGTGCTTACAACGCGTCTTTGCACGCCCTACAAT
CGCTTCAACCGTGGGCAGAGAACAAGCCCGACCCCAACCGGCCGGCCTAC
CTGAACGCACCCTCCCTCACCACGCCAACGATCTGCTAGATGTCCCAGCC
CAGTTTCTACTCCCCTCACCTCTCCTGGCCCACGACGCCGTCCTGTGGCA
GCGTGGCGAACGGCGTGATCAGAGTACCGGCCCACCGGCCCGCGCCACCT
CCCCTCAACGCGCACTTCCCGTGGATGGACCAACGGGCCAGGCTCGCCAA
GGAAGGTCTAGCAGTGCCACCATTTACCGTTACACGGCGGATCGGGCACC
CCTACCAGAACAGGACGCCACCCAAGAGAAAGAAACCGAGAACCTCCTTC
ACAAGGCTTCAAATCTGCGAACTGGAGAAAAGATTCCACAAACAGAAATA
TTTGGCGTCGGCAGAGAGGGCTCAACTCGCCACCCAACTCAAAATGACGG
ACGCCCAAGTCAAGACATGGTTTCAGAACAGAAGAACAAAGTGGAGGCGG
CAGACAGCCGAGGAGAGAGAGGCGGAGAGACAGCAGGCCAACAGAATGCT
GCTGCAGCTACAAGCGGAAGCAGCCAAGAACATGCCTCAGACTTACGATC
CTATCTGTGCTTACAACGCGTCTTTGCACGCCCTACAATCGCTTCAACCG
TGGGCAGAGAACAAGCCCGACCCCAACCGGCCGGCCTACCTGAACGCACC
CTCCCTCACCACGCCAACGATCTGCTAGATGTCCCAGCCCAGTTTCTACT
CCCCTCACCTCTCCTGGCCCACGACGCCGTCCTGTGGCAGCGTGGCGAAC
GGCGTGATCAGAGTACCGGCCCACCGGCCCGCGCCACCTCCCCTCAACGC
GCACTTCCCGTGGATGGACCAACGGGCCAGGCTCGCCAAGGAAGGTCTAG
CAGTGCCACCATTTACCGTTACACGGCGGATCGGGCACCCCTACCAGAAC
AGGACGCCACCCAAGAGAAAGAAACCGAGAACCTCCTTCACAAGGCTTCA
AATCTGCGAACTGGAGAAAAGATTCCACAAACAGAAATATTTGGCGTCGG
CAGAGAGGGCTCAACTCGCCACCCAACTCAAAATGACGGACGCCCAAGTC
AAGACATGGTTTCAGAACAGAAGAACAAAGTGGAGGCGGCAGACAGCCGA
GGAGAGAGAGGCGGAGAGACAGCAGGCCAACAGAATGCTGCTGCAGCTAC
AAGCGGAAGCAGCCAAGAACATGCCTCAGACTTACGATCCTATCTGTGCT
TACAACGCGTCTTTGCACGCCCTACAATCGCTTCAACCGTGGGCAGAGAA
CAAGCCCGACCCCAACCGGCCGGCCTACCTGAACGCACCCTCCCTCACCA
CGCCAACGATCTGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000072 | genome | Sc0000072:233131..236395 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95610_evm1 |
| Biotype | protein_coding |
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