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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95606_evm0 >transcript:BL95606_evm0-protein ID=transcript:BL95606_evm0-protein|Name=transcript:BL95606_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=283bp
MPAKSKRSPLPVIEDGIEIVDAESYQQTSGDTCAPRKHFVWIKVHKAGSQ
TTNPIFERFAYKHHLKLLFGISNGPTVYWPHSPRGGLYVQTRKGGLFDAL
YVHSRYNKTWMRAHFPNDTVYLAIVKDPFSHFKSSFHYYGLQQHLNLQDS
WNPIKTFLKNPWKYKTEALYQGIRFDKTRNAQLFDLGFPIEKSHDMIWAE
EYIKQLNSRNYRYKHYRPTQEELVRYKQYAEAEYAMYERFNKSLWNKISQ
QSQDFFQEVEHYKQNKDNELPSKYVGHSIHVML Run BLAST on NCBI mRNA from alignment at Sc0000072:894191..896321+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95606_evm0 ID=transcript:BL95606_evm0|Name=transcript:BL95606_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2131bp|location=Sequence derived from alignment at Sc0000072:894191..896321+ (Branchiostoma lanceolatum)
ATGCCTGCTAAAAGCAAACGTTCACCACTGCCAGTGATTGAAGATGGAAT
AGAGATAGTCGACGCTGAAAGTTACCAACAGACTTCTGGAGATACGTGCG
CTCCTAGGAAGCATTTCGTGTGGATCAAGGTCCATAAGGCCGGGTCGCAG
ACCACAAACCCAATCTTCGAACGATTCGCCTACAAGCACCATCTGAAGGT
CAGGGTTATGTTATCAACTATTCAAAACGGAACTTGCAATGGGTTCTGTT
ATTTTATAATCTCGATTTGTCATGTTAGATAATTTTTTTGCCTGTCTCTT
CATCAGTAAGTTGTATATGCCCTTCCAATATGTATGTGAACTTCAGTAGA
TTGACTACTGACCACAGACATCAGAGATAACCTTCACTTCTTGCGCCTCC
CTCCCATCGTTTTCTTATCCAGCTATTGTTTGGTATCTCCAACGGACCGA
CTGTGTATTGGCCGCATTCTCCGAGAGGGGGCTTGTATGTCCAGACCCGG
AAGGGAGGGCTGTTCGACGCATTGTATGTTCACAGGTAAGTTGCCACTGT
AGTGATATCGATCTCATTTCTAATTTCATACTTGTGAAAACATCACGGAA
CAATTTTTCATTATCATATAGTGACAAAACTGCATGCAGAAATATCTGAA
ATAGTCGCGTATGTCTGCTCTGGTATATCAGCTGCGTACTACAATATATA
ACAGAAATAGCTTGATCTATATCTGTTGTAACAGTTGTTCTTGTTAACGT
TGTTGTAACCTTTTGCGTCTGAACCTCCATAGCTACAATCATCTCTGAAA
GGTTAACGTTGTAAGGTCAGGTCAGTTAAAATGTCAACAGAAGTAGACAA
GCAATACATCAGTTTACGAGGTTCGTTCTTACAATGTGGTGGTTCTTTTT
ATTCATTACCTATTATCAACTTTTGCCTCAAATTGTAATTAACAGATAAG
CAAACAATGACGTTCTTATCTTTACAGTCGTTACAATAAAACATGGATGC
GAGCCCACTTTCCCAACGACACGGTGTATCTGGCCATTGTTAAGGATCCG
TTCTCCCACTTCAAGTCCAGTTTTCACTACTACGGTCTACAGCAGCACCT
CAACTTACAAGACTCATGGAACCCGATCAAGACGTTTCTCAAGAACCCCT
GGAAATACAAGACAGAGGCATTGTATCAGGGAATACGGTTCGACAAAACC
AGAAACGCACAACTCTTTGACCTGGGATTTCCCATTGAGAAGTCACACGA
CATGATATGGGCCGAAGAATACATCAAACAGTTAGACATAGACTTCTTAC
TAGTGATAATTCTAGAACATCATGCAGAATCCTTGGTATTAATGAAGAGA
TTAATGTGTTGGGAACTGCTCGATATTCTATTGGTAGAAGATAGATTAAA
CTCTCGAAATTACCGGTACAAGCACTATCGTCCCACACAAGAAGAATTGG
TGAGGTACAAGCAGTACGCAGAGGCAGAATACGCGATGTACGAACGATTC
AACAAGTCCCTGTGGAACAAAATCTCACAGCAGAGTCAGGACTTCTTCCA
AGAGGTGGAACACTACAAGCAGGTGACGAAGCGAGTTCGAGATTTTTGCA
TTGCCAACTCAACGAAAGAACTTGTTATTTCAGCTTCTCCGTGGAATCCT
CAATATAAAATGAGACAGTCTACATGTACCTACCTCAAAATACATGACTA
TGAATGGAGAAAATATTCGTGGGCACAGCTTCGCTATCCAGCACGTATCA
AACGCCCCTTGCGACTTGAATACTACAACAACATTAGCAAGTATCACGAC
AAGCTGCTAGCTGCGGCCAGAAATGACTCTGCAGAAATGGGGAGATCATT
ACGCAAGGGCTATACGAAATAAAAGTGTTTGTCCATTGACTACTTCATTG
TAGTACTGACTTCCAGTTCCAACTTGGCATTTTTTTTATTACCTGAAGTG
TGAAGTGAACATTAAATTGGCATTCACGTGATCATCATAAGATGCTCCAG
CTACATTTATGAGTGTAGACGGACGAGTTTTGTTCAATGGTTACATCCCC
TCCTCACCATGTCCTTTACAGAACAAAGATAATGAGCTGCCATCTAAGTA
TGTGGGGCATTCTATTCATGTCATGCTTTGA Coding sequence (CDS) from alignment at Sc0000072:894191..896321+ >transcript:BL95606_evm0 ID=transcript:BL95606_evm0|Name=transcript:BL95606_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4260bp|location=Sequence derived from alignment at Sc0000072:894191..896321+ (Branchiostoma lanceolatum)
ATGCCTGCTAAAAGCAAACGTTCACCACTGCCAGTGATTGAAGATGGAAT
AGAGATAGTCGACGCTGAAAGTTACCAACAGACTTCTGGAGATACGTGCG
CTCCTAGGAAGCATTTCGTGTGGATCAAGGTCCATAAGGCCGGGTCGCAG
ACCACAAACCCAATCTTCGAACGATTCGCCTACAAGCACCATCTGAAGCT
ATTGTTTGGTATCTCCAACGGACCGACTGTGTATTGGCCGCATTCTCCGA
GAGGGGGCTTGTATGTCCAGACCCGGAAGGGAGGGCTGTTCGACGCATTG
TATGTTCACAGTCGTTACAATAAAACATGGATGCGAGCCCACTTTCCCAA
CGACACGGTGTATCTGGCCATTGTTAAGGATCCGTTCTCCCACTTCAAGT
CCAGTTTTCACTACTACGGTCTACAGCAGCACCTCAACTTACAAGACTCA
TGGAACCCGATCAAGACGTTTCTCAAGAACCCCTGGAAATACAAGACAGA
GGCATTGTATCAGGGAATACGGTTCGACAAAACCAGAAACGCACAACTCT
TTGACCTGGGATTTCCCATTGAGAAGTCACACGACATGATATGGGCCGAA
GAATACATCAAACAATTAAACTCTCGAAATTACCGGTACAAGCACTATCG
TCCCACACAAGAAGAATTGGTGAGGTACAAGCAGTACGCAGAGGCAGAAT
ACGCGATGTACGAACGATTCAACAAGTCCCTGTGGAACAAAATCTCACAG
CAGAGTCAGGACTTCTTCCAAGAGGTGGAACACTACAAGCAGAACAAAGA
TAATGAGCTGCCATCTAAGTATGTGGGGCATTCTATTCATGTCATGCTTT
GAATGCCTGCTAAAAGCAAACGTTCACCACTGCCAGTGATTGAAGATGGA
ATAGAGATAGTCGACGCTGAAAGTTACCAACAGACTTCTGGAGATACGTG
CGCTCCTAGGAAGCATTTCGTGTGGATCAAGGTCCATAAGGCCGGGTCGC
AGACCACAAACCCAATCTTCGAACGATTCGCCTACAAGCACCATCTGAAG
CTATTGTTTGGTATCTCCAACGGACCGACTGTGTATTGGCCGCATTCTCC
GAGAGGGGGCTTGTATGTCCAGACCCGGAAGGGAGGGCTGTTCGACGCAT
TGTATGTTCACAGTCGTTACAATAAAACATGGATGCGAGCCCACTTTCCC
AACGACACGGTGTATCTGGCCATTGTTAAGGATCCGTTCTCCCACTTCAA
GTCCAGTTTTCACTACTACGGTCTACAGCAGCACCTCAACTTACAAGACT
CATGGAACCCGATCAAGACGTTTCTCAAGAACCCCTGGAAATACAAGACA
GAGGCATTGTATCAGGGAATACGGTTCGACAAAACCAGAAACGCACAACT
CTTTGACCTGGGATTTCCCATTGAGAAGTCACACGACATGATATGGGCCG
AAGAATACATCAAACAATTAAACTCTCGAAATTACCGGTACAAGCACTAT
CGTCCCACACAAGAAGAATTGGTGAGGTACAAGCAGTACGCAGAGGCAGA
ATACGCGATGTACGAACGATTCAACAAGTCCCTGTGGAACAAAATCTCAC
AGCAGAGTCAGGACTTCTTCCAAGAGGTGGAACACTACAAGCAGAACAAA
GATAATGAGCTGCCATCTAAGTATGTGGGGCATTCTATTCATGTCATGCT
TTGAATGCCTGCTAAAAGCAAACGTTCACCACTGCCAGTGATTGAAGATG
GAATAGAGATAGTCGACGCTGAAAGTTACCAACAGACTTCTGGAGATACG
TGCGCTCCTAGGAAGCATTTCGTGTGGATCAAGGTCCATAAGGCCGGGTC
GCAGACCACAAACCCAATCTTCGAACGATTCGCCTACAAGCACCATCTGA
AGCTATTGTTTGGTATCTCCAACGGACCGACTGTGTATTGGCCGCATTCT
CCGAGAGGGGGCTTGTATGTCCAGACCCGGAAGGGAGGGCTGTTCGACGC
ATTGTATGTTCACAGTCGTTACAATAAAACATGGATGCGAGCCCACTTTC
CCAACGACACGGTGTATCTGGCCATTGTTAAGGATCCGTTCTCCCACTTC
AAGTCCAGTTTTCACTACTACGGTCTACAGCAGCACCTCAACTTACAAGA
CTCATGGAACCCGATCAAGACGTTTCTCAAGAACCCCTGGAAATACAAGA
CAGAGGCATTGTATCAGGGAATACGGTTCGACAAAACCAGAAACGCACAA
CTCTTTGACCTGGGATTTCCCATTGAGAAGTCACACGACATGATATGGGC
CGAAGAATACATCAAACAATTAAACTCTCGAAATTACCGGTACAAGCACT
ATCGTCCCACACAAGAAGAATTGGTGAGGTACAAGCAGTACGCAGAGGCA
GAATACGCGATGTACGAACGATTCAACAAGTCCCTGTGGAACAAAATCTC
ACAGCAGAGTCAGGACTTCTTCCAAGAGGTGGAACACTACAAGCAGAACA
AAGATAATGAGCTGCCATCTAAGTATGTGGGGCATTCTATTCATGTCATG
CTTTGAATGCCTGCTAAAAGCAAACGTTCACCACTGCCAGTGATTGAAGA
TGGAATAGAGATAGTCGACGCTGAAAGTTACCAACAGACTTCTGGAGATA
CGTGCGCTCCTAGGAAGCATTTCGTGTGGATCAAGGTCCATAAGGCCGGG
TCGCAGACCACAAACCCAATCTTCGAACGATTCGCCTACAAGCACCATCT
GAAGCTATTGTTTGGTATCTCCAACGGACCGACTGTGTATTGGCCGCATT
CTCCGAGAGGGGGCTTGTATGTCCAGACCCGGAAGGGAGGGCTGTTCGAC
GCATTGTATGTTCACAGTCGTTACAATAAAACATGGATGCGAGCCCACTT
TCCCAACGACACGGTGTATCTGGCCATTGTTAAGGATCCGTTCTCCCACT
TCAAGTCCAGTTTTCACTACTACGGTCTACAGCAGCACCTCAACTTACAA
GACTCATGGAACCCGATCAAGACGTTTCTCAAGAACCCCTGGAAATACAA
GACAGAGGCATTGTATCAGGGAATACGGTTCGACAAAACCAGAAACGCAC
AACTCTTTGACCTGGGATTTCCCATTGAGAAGTCACACGACATGATATGG
GCCGAAGAATACATCAAACAATTAAACTCTCGAAATTACCGGTACAAGCA
CTATCGTCCCACACAAGAAGAATTGGTGAGGTACAAGCAGTACGCAGAGG
CAGAATACGCGATGTACGAACGATTCAACAAGTCCCTGTGGAACAAAATC
TCACAGCAGAGTCAGGACTTCTTCCAAGAGGTGGAACACTACAAGCAGAA
CAAAGATAATGAGCTGCCATCTAAGTATGTGGGGCATTCTATTCATGTCA
TGCTTTGAATGCCTGCTAAAAGCAAACGTTCACCACTGCCAGTGATTGAA
GATGGAATAGAGATAGTCGACGCTGAAAGTTACCAACAGACTTCTGGAGA
TACGTGCGCTCCTAGGAAGCATTTCGTGTGGATCAAGGTCCATAAGGCCG
GGTCGCAGACCACAAACCCAATCTTCGAACGATTCGCCTACAAGCACCAT
CTGAAGCTATTGTTTGGTATCTCCAACGGACCGACTGTGTATTGGCCGCA
TTCTCCGAGAGGGGGCTTGTATGTCCAGACCCGGAAGGGAGGGCTGTTCG
ACGCATTGTATGTTCACAGTCGTTACAATAAAACATGGATGCGAGCCCAC
TTTCCCAACGACACGGTGTATCTGGCCATTGTTAAGGATCCGTTCTCCCA
CTTCAAGTCCAGTTTTCACTACTACGGTCTACAGCAGCACCTCAACTTAC
AAGACTCATGGAACCCGATCAAGACGTTTCTCAAGAACCCCTGGAAATAC
AAGACAGAGGCATTGTATCAGGGAATACGGTTCGACAAAACCAGAAACGC
ACAACTCTTTGACCTGGGATTTCCCATTGAGAAGTCACACGACATGATAT
GGGCCGAAGAATACATCAAACAATTAAACTCTCGAAATTACCGGTACAAG
CACTATCGTCCCACACAAGAAGAATTGGTGAGGTACAAGCAGTACGCAGA
GGCAGAATACGCGATGTACGAACGATTCAACAAGTCCCTGTGGAACAAAA
TCTCACAGCAGAGTCAGGACTTCTTCCAAGAGGTGGAACACTACAAGCAG
AACAAAGATAATGAGCTGCCATCTAAGTATGTGGGGCATTCTATTCATGT
CATGCTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000072 | genome | Sc0000072:894191..896321 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95606_evm0 |
| Biotype | protein_coding |
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