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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95604_evm0 >transcript:BL95604_evm0-protein ID=transcript:BL95604_evm0-protein|Name=transcript:BL95604_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=233bp
MKFVVPSVKFGRSEVANVPRFRPRDTMLTLLVLTTLVSLAVTSPVLPTQT
WPPAFCNKLECPKYTTVKTTKDYEERQYDAAKWSSTTISGMSYDEASRTG
FQRLFNYISGSNKGQVKIPMTAPVTTKVLPGQGPFCKTNFTVSFFVPFAD
QTSPPEPSDPNVFTNPLAGMTAFVKSFGGYASDTDWTKNAAALAESLDNA
TINYHKEFYYTAGYDSPFTPLHRHNEVWFIKAD Run BLAST on NCBI mRNA from alignment at Sc0000071:1269395..1272776+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95604_evm0 ID=transcript:BL95604_evm0|Name=transcript:BL95604_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3382bp|location=Sequence derived from alignment at Sc0000071:1269395..1272776+ (Branchiostoma lanceolatum)
ATGAAATTCGTTGTGCCCTCTGTCAAATTCGGTCGCAGCGAGGTCGCCAA
CGTGCCGCGGTTCCGGTTAGATACATGCGTTGCACAAGACCATTCATTTG
AAGGCAACCAAAGCAATATTAGGGCCCAAAATATGGAAATGAAGAAAAAA
ATGCTGAAATCTTTATGGTGGTGACATTGTTACTAACACTATTTAGCACA
TTTCATTTGCGTAATAACTTCATTCTTAAAGTATTTCAAAACCTCGCAAA
AACGTGCCGTACGATGATTCCCTTAGTTTCGCGAGCCTACCAAAAACCCG
GGCGACGATTTTCAGTGAGTTCTCACACCACAACAACGTCGTATTTTTGT
ATGACGGAAGTCGCTATACATTGTGATAGTGTTATTTGAAGTTATCGTGT
ATAGATATGACTAAATAAATTGACTTTCAAAATCCGATTTTCGGGCCCTT
GTATTGCTTGGGTTTGACCTTTATTAAGCCGGTGTCACAATTTATGCGAG
CGTCGGCCGACTTTGTAGATCGCCCGAAGCTCGCCAAATTTCAAAATCGC
CCGAGCACCGACCGTATTTTCCAATGAAAATCTCGGGTGACGTCCGTCGA
ACACTAAAAACTAAAAATCCCCCATGGGGTGGTGCCAGCTCTTGGACATG
GACGAAGTCTGAATAGACTAACCTGGTAAACGGCCAATATTTGGATCAAC
TTTGATTTCTAAAAATCGCCCGAATCCCGCGTTATCGACAGGACGTCGTC
CGTTTTTCGGCCGAAAATGCACATTTGAAGCTCGCCAACACGTCGGCCGA
GCTCAATTTCTTATTTGTGACGGGGGCTTTAACGAGTAGTGCATAGTGTT
GTACATTGATAGCATAGAAATAGATCAACAGTGTACAAATGATTCAAACC
TAACATCTTCCCACAGACCCAGAGACACAATGTTAACGCTGCTCGTCCTG
ACAACCCTGGTCAGCCTCGCTGTTACCAGCCCCGTCCTCCCCACACAGAC
ATGGCCGCCGGCTTTCTGTAACAAACTGGAGTGTCCCAAATACACCACAG
TCAAGACTACAAAGGTACACATCTGTACATACAATAACGACATCTGTAAG
ATGAAAAGTTACCTAATACTCTGTACACAATGGCTGTATTCAGGTACCGC
AGACGAAACCTTGACAACGTTTGCACAACCTGTGTACATGTAAATGGAGC
GAAAACGGTAATCTCCAACTTAGCAGTGCAAAAGGGGGTACAACAGATAG
TTGAATCCTGCATGTAGGGTATATTTGATGAATACAGTATTTTCACAATT
GCTATAAATTCTGAAGCAGTCATTTCTTGCTATCCTTATTCTTGTTTACT
TATTTGATTGACTAATGAATCACAATTTCTGTGAAAGCCTGGGTATTAAC
TATGCCGGCTATAGGGAGAATACTTGCCAGGGGACTTTTGGCCAACATAG
GATTTTATTTCCAGGCGAATGTTAATCTTCTCGTGCACTGACTCTTTTGG
CCATTTATTCTCAATTTTGTCCATTTCTACGATCCATACCCCCGTGGGAA
TGCCTGGTGGAGGCTATGGCATCGGAACGCTTTAATATTGTGGGACGAAA
CGAAAACGATTTATAAAAGTAAATATTTCTTCCTCTGTTCAGGATTATGA
AGAACGCCAGTATGACGCAGCTAAGTGGAGCAGCACCACCATCTCCGGTA
TGAGCTATGACGAGGCCTCCAGGACGGGATTCCAGAGACTCTTCAACTAC
ATCTCAGGCTCCAACAAGGGCCGTGAGTACCTCTTTACTTTATCTTGTGA
TCTAATCAGTCAACCTGACCAATGAAAACACAGGATCTATTTCTATTTTC
TCCAAGAAGGGTATGTTTTCGGGATGAGTGTGTCCGTGTGTGGACACGAT
AAGTCGAGAATGCCTGGATAGATGTCAAATGTCAAAAATTTGGATCGTAT
CTACCACCTAGCGCAGTCCATGTGAACTGCAGGACAAAGTTGGTCCAGCT
GTGATACCAGTAGTAAGGAGGTTTTAAAAANTGTGATAACAGTAGTAAGG
AGGTTTTAAAGAAATCAGTAGGAAAAAGTAGCAATTTCTGACTTAGTGCT
TCTCTAAAATCTTTAAAACAAAGAGAGGAAGACGTTTTGATAAACATGCA
GTTCATATAGATTTTCTATTGAGGCACCCCTACCGACAAAGATATGAACC
GCAAGACAGTCGCCCTATCTAGTGATATTACAATGAACTGCAGCAATAGC
GCTGAAAATAAATAACACAACCTGTAGCAAGTTATCAACATGACAAAGAC
CTTATATCCTTTTTTTTCCCCTTGTTCCCTCACAGAGGTTAAGATCCCGA
TGACAGCGCCCGTGACTACGAAGGTACTACCAGGACAGGGCCCGTTCTGT
AAGACCAACTTCACCGTGTCTTTCTTCGTGCCGTTCGCCGATCAGACCAG
CCCACCTGAACCTTCCGACCCCAACGTTTTCACCAACCCTCTTGCAGGAA
TGACAGCTTTTGTTAAGTAAGGGTTATGTCCATTTTCTAGTTCTTTTTTT
CTAAAAACATCACATTTCTGTATAATACAAAGAAGATCGGTAGCCTACCG
CGGACCAAATGTCTGGAACAGCCTACCGCCAGACACACGTACGGCTCCGA
ATCTGACTTCCTTTAAGAGACTCTTGAAGTAACGGAAATGAACAAAACGA
ACGGACACGGAACATGAACCAGCTTTCGCCCTACTATATGTTGTATGTTG
TAGCAATTGTATATTGTTGTACCATATGAATATGTAATGATATATGTTGA
TAGAGTTATTAGGACTCAAATGAATGTATATCTCTGTTACTAGTATTGTA
TCTGACCCTTACCTCTTCCCTTATGACCTCAATGCAAAGGCTCAAAGAAA
CAAACAAACAAACAAACAAACAAACAAACCAATGAATGAATTAGACCATT
ATATGCTAGCTAACACGGCTACGAAAAGTAGTGGATGCTACTTGAAACGT
CTGAGCGTTTCCAAAATCATGTACATGATAGATATCATAGAGATTGGGGG
TCTGGCATCCAGGCTAATTTTGTCGTGACCGTGTCCAATTCTCGTCTATT
TCAGAGGTCGTACAATGTTTAGTGCTGCAACGGTAAAATATTTCCCTTTC
CTTTCTTAGATTCTAGATCGAAAGTACTGTAATTTTTCGCCATGTCTTTT
GCAGATCTTTCGGTGGATACGCCAGCGACACAGACTGGACCAAGAACGCC
GCAGCTCTGGCCGAAAGTCTGGACAACGCTACAATCAACTACCACAAGGA
GTTCTACTACACAGCCGGATACGACAGTCCATTCACACCGCTGCATAGGC
ACAATGAAGTCTGGTTTATCAAGGCCGATTAG Coding sequence (CDS) from alignment at Sc0000071:1269395..1272776+ >transcript:BL95604_evm0 ID=transcript:BL95604_evm0|Name=transcript:BL95604_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3510bp|location=Sequence derived from alignment at Sc0000071:1269395..1272776+ (Branchiostoma lanceolatum)
ATGAAATTCGTTGTGCCCTCTGTCAAATTCGGTCGCAGCGAGGTCGCCAA
CGTGCCGCGGTTCCGACCCAGAGACACAATGTTAACGCTGCTCGTCCTGA
CAACCCTGGTCAGCCTCGCTGTTACCAGCCCCGTCCTCCCCACACAGACA
TGGCCGCCGGCTTTCTGTAACAAACTGGAGTGTCCCAAATACACCACAGT
CAAGACTACAAAGGATTATGAAGAACGCCAGTATGACGCAGCTAAGTGGA
GCAGCACCACCATCTCCGGTATGAGCTATGACGAGGCCTCCAGGACGGGA
TTCCAGAGACTCTTCAACTACATCTCAGGCTCCAACAAGGGCCAGGTTAA
GATCCCGATGACAGCGCCCGTGACTACGAAGGTACTACCAGGACAGGGCC
CGTTCTGTAAGACCAACTTCACCGTGTCTTTCTTCGTGCCGTTCGCCGAT
CAGACCAGCCCACCTGAACCTTCCGACCCCAACGTTTTCACCAACCCTCT
TGCAGGAATGACAGCTTTTGTTAAATCTTTCGGTGGATACGCCAGCGACA
CAGACTGGACCAAGAACGCCGCAGCTCTGGCCGAAAGTCTGGACAACGCT
ACAATCAACTACCACAAGGAGTTCTACTACACAGCCGGATACGACAGTCC
ATTCACACCGCTGCATAGGCACAATGAAGTCTGGTTTATCAAGGCCGATT
AGATGAAATTCGTTGTGCCCTCTGTCAAATTCGGTCGCAGCGAGGTCGCC
AACGTGCCGCGGTTCCGACCCAGAGACACAATGTTAACGCTGCTCGTCCT
GACAACCCTGGTCAGCCTCGCTGTTACCAGCCCCGTCCTCCCCACACAGA
CATGGCCGCCGGCTTTCTGTAACAAACTGGAGTGTCCCAAATACACCACA
GTCAAGACTACAAAGGATTATGAAGAACGCCAGTATGACGCAGCTAAGTG
GAGCAGCACCACCATCTCCGGTATGAGCTATGACGAGGCCTCCAGGACGG
GATTCCAGAGACTCTTCAACTACATCTCAGGCTCCAACAAGGGCCAGGTT
AAGATCCCGATGACAGCGCCCGTGACTACGAAGGTACTACCAGGACAGGG
CCCGTTCTGTAAGACCAACTTCACCGTGTCTTTCTTCGTGCCGTTCGCCG
ATCAGACCAGCCCACCTGAACCTTCCGACCCCAACGTTTTCACCAACCCT
CTTGCAGGAATGACAGCTTTTGTTAAATCTTTCGGTGGATACGCCAGCGA
CACAGACTGGACCAAGAACGCCGCAGCTCTGGCCGAAAGTCTGGACAACG
CTACAATCAACTACCACAAGGAGTTCTACTACACAGCCGGATACGACAGT
CCATTCACACCGCTGCATAGGCACAATGAAGTCTGGTTTATCAAGGCCGA
TTAGATGAAATTCGTTGTGCCCTCTGTCAAATTCGGTCGCAGCGAGGTCG
CCAACGTGCCGCGGTTCCGACCCAGAGACACAATGTTAACGCTGCTCGTC
CTGACAACCCTGGTCAGCCTCGCTGTTACCAGCCCCGTCCTCCCCACACA
GACATGGCCGCCGGCTTTCTGTAACAAACTGGAGTGTCCCAAATACACCA
CAGTCAAGACTACAAAGGATTATGAAGAACGCCAGTATGACGCAGCTAAG
TGGAGCAGCACCACCATCTCCGGTATGAGCTATGACGAGGCCTCCAGGAC
GGGATTCCAGAGACTCTTCAACTACATCTCAGGCTCCAACAAGGGCCAGG
TTAAGATCCCGATGACAGCGCCCGTGACTACGAAGGTACTACCAGGACAG
GGCCCGTTCTGTAAGACCAACTTCACCGTGTCTTTCTTCGTGCCGTTCGC
CGATCAGACCAGCCCACCTGAACCTTCCGACCCCAACGTTTTCACCAACC
CTCTTGCAGGAATGACAGCTTTTGTTAAATCTTTCGGTGGATACGCCAGC
GACACAGACTGGACCAAGAACGCCGCAGCTCTGGCCGAAAGTCTGGACAA
CGCTACAATCAACTACCACAAGGAGTTCTACTACACAGCCGGATACGACA
GTCCATTCACACCGCTGCATAGGCACAATGAAGTCTGGTTTATCAAGGCC
GATTAGATGAAATTCGTTGTGCCCTCTGTCAAATTCGGTCGCAGCGAGGT
CGCCAACGTGCCGCGGTTCCGACCCAGAGACACAATGTTAACGCTGCTCG
TCCTGACAACCCTGGTCAGCCTCGCTGTTACCAGCCCCGTCCTCCCCACA
CAGACATGGCCGCCGGCTTTCTGTAACAAACTGGAGTGTCCCAAATACAC
CACAGTCAAGACTACAAAGGATTATGAAGAACGCCAGTATGACGCAGCTA
AGTGGAGCAGCACCACCATCTCCGGTATGAGCTATGACGAGGCCTCCAGG
ACGGGATTCCAGAGACTCTTCAACTACATCTCAGGCTCCAACAAGGGCCA
GGTTAAGATCCCGATGACAGCGCCCGTGACTACGAAGGTACTACCAGGAC
AGGGCCCGTTCTGTAAGACCAACTTCACCGTGTCTTTCTTCGTGCCGTTC
GCCGATCAGACCAGCCCACCTGAACCTTCCGACCCCAACGTTTTCACCAA
CCCTCTTGCAGGAATGACAGCTTTTGTTAAATCTTTCGGTGGATACGCCA
GCGACACAGACTGGACCAAGAACGCCGCAGCTCTGGCCGAAAGTCTGGAC
AACGCTACAATCAACTACCACAAGGAGTTCTACTACACAGCCGGATACGA
CAGTCCATTCACACCGCTGCATAGGCACAATGAAGTCTGGTTTATCAAGG
CCGATTAGATGAAATTCGTTGTGCCCTCTGTCAAATTCGGTCGCAGCGAG
GTCGCCAACGTGCCGCGGTTCCGACCCAGAGACACAATGTTAACGCTGCT
CGTCCTGACAACCCTGGTCAGCCTCGCTGTTACCAGCCCCGTCCTCCCCA
CACAGACATGGCCGCCGGCTTTCTGTAACAAACTGGAGTGTCCCAAATAC
ACCACAGTCAAGACTACAAAGGATTATGAAGAACGCCAGTATGACGCAGC
TAAGTGGAGCAGCACCACCATCTCCGGTATGAGCTATGACGAGGCCTCCA
GGACGGGATTCCAGAGACTCTTCAACTACATCTCAGGCTCCAACAAGGGC
CAGGTTAAGATCCCGATGACAGCGCCCGTGACTACGAAGGTACTACCAGG
ACAGGGCCCGTTCTGTAAGACCAACTTCACCGTGTCTTTCTTCGTGCCGT
TCGCCGATCAGACCAGCCCACCTGAACCTTCCGACCCCAACGTTTTCACC
AACCCTCTTGCAGGAATGACAGCTTTTGTTAAATCTTTCGGTGGATACGC
CAGCGACACAGACTGGACCAAGAACGCCGCAGCTCTGGCCGAAAGTCTGG
ACAACGCTACAATCAACTACCACAAGGAGTTCTACTACACAGCCGGATAC
GACAGTCCATTCACACCGCTGCATAGGCACAATGAAGTCTGGTTTATCAA
GGCCGATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000071 | genome | Sc0000071:1269395..1272776 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95604_evm0 |
| Biotype | protein_coding |
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