|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95594_evm0 >transcript:BL95594_evm0-protein ID=transcript:BL95594_evm0-protein|Name=transcript:BL95594_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=211bp
MCSVKVENYEKGEVVAVPDDTPTPWGDDVLEMKVQHGSKVRNLMGFAVRK
FKDETVRQIVWSGSDKAISKTVTCAEILKRKFKNIHQITKIKYKIVEEIW
EPKMEGLDRLKVKRQIPAISILLSKDALDKDEQGYQAPGTYDSLWNAESQ
QNRSKPAKKRGPPSNARGGGQKSKSPKPDGTPSSKKQGGRGQGRGGDRQQ
GKVQDRGQQKT Run BLAST on NCBI mRNA from alignment at Sc0000067:552838..556087- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95594_evm0 ID=transcript:BL95594_evm0|Name=transcript:BL95594_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3250bp|location=Sequence derived from alignment at Sc0000067:552838..556087- (Branchiostoma lanceolatum)
ATGTGCAGTGTCAAAGGTGAAGGCCCCCGCGACAGAAACAAGACCCGTCT
GGGCCTTGTTATGCAAATCGAGATAATGTGGAGGCTAACACTGTTTCCGT
CGTGGGGGCCTTCACCTTTGACACTGCACATGCGTAGTAGCAACTCCGAA
CTAGCTTATTACCCATCCTTCACACGTAACGTTACACAGAACGTGCAATG
AGAAATGTAAGATAGAACCCCAGTCCAAAAAAAACGTTTTGTTTTAAAAG
GTCCCAGTTGGAAAGAGGCCCTTCGGATATTTGACCTTTTTTTCACTTTT
GGGTGTGACCCCTGTGGTTGACGGGCTATTTTGGGGCCTGGCTTGGACCC
CGAATCATTTTAACCCGGTAACAAATAGATGCCTAATCGTGCAAACACAG
GGAGGTACTCGGCAGTCCACTGGGACAAATTTGTGGCTTCGGGGCCCGGC
CAGGACCTGCAGGCACCAGCGCAATTGGGACCTAAGCATACTAGTAAGAC
AAGAACAAAGTCTCTCAACCTGAAAATGAGTAACAAGTATTGATTTCTAT
GACTGTTTGCAGTGGAGAATTATGAGAAGGGGGAGGTGGTGGCCGTCCCA
GACGACACCCCCACACCCTGGGGGGACGACGTTCTGGAGATGAAGGTCCA
GCATGGCAGCAAAGTACGGAACCTCATGGGGTTTGCTGTCAGGAAGTTTA
AGGTGAGAGACTGACCCTGAGAAACTGTAGCTACAATTTCTCCTTGTGAG
ATTGCCTGGCCCTTGAGAGTATGGTACAAATACAGACAAGAGTTCATACA
TGACCTCATACAACCTTCACCAAATGATGCTTTTTGAGTGATGTCATAAA
TGTTTCTCATTAATTATTAAGATAATGTCCAAGACTTTACCCACAATTCT
TCCCGAGTATCAGCATAATTCATTCAGGCATTCTCGACTTATCATGTTCA
CACATAGACACACGTTCCCGAAAACATAACCATGATGATCTTGGAAGATA
AATATATTTGCTTTGCAAGAAGATCATTGTTGCCTGCCTGACGGTTGGAA
TAAACATGTTGTGACACCTAACAGTACCAAATATATGGCATGTGCATGTA
GTCTACTTCTGGTGTTTAATGGCTTCTGCAGTCTTAATATAAGCCAGTCT
TAATATAAGCCAATGCTACTTCAGAAACTATTCCCTTTACTATAAACTCA
GATCAAACAACCAATCTATTCTGTATTCAAGGCTGTTAATTGGGATCCTA
TGGTCTTTTACAGACCAATCAAGTCCTGCAGCTAGTATTGCATTTGTGTC
TGTGAGGAGTTCTCAACAAAGTACATGAATTTCTGAATGTTTTACTTCAG
GATGAGACAGTGAGACAAATCGTGTGGTCAGGTTCAGACAAGGCCATCTC
CAAGACTGTCACATGTGCAGAGATACTCAAGAGGAAGTTCAAGGTCAGCA
CAGACAACTCTCTCTCCATCCTTTGTTTAGTACCTTAACTGTGTCTCCAT
GTCCCAAACTGAGTTACTTCGAGTACTAGTATATGTAAGCTGCCATACAT
GAACAGATAAACAAACTGGGTGTAATAGCTTAGCAGAGTACGTACCATGA
ATCACAGTCTCAACAGAAGTTAGAGATACACTTTTTTGATAGCTATCAAG
TCTGAGGACAATGTATGATGGTTTTCTATGTATATCAACATCAACATTTT
TTGTTGTTTCAGAATATCCATCAAATAACCAAGATTAAATACAAAATGTG
AGTACTGCATTGCGGTTGGAATTATCTGATTTTACATGTACTTTATTTCA
TTTTTTTCTGTTTCAATAGTTAGTTTGTCTGCTGTGCTACCATCACATTT
GCCCCTGTGCCCGGTCCGGATGTAGACCCCGCCGGGCTCTGAAGCCCCAA
ATTTGTCCTCTCCAACGTTCTAACGATTATCTTACGGCGTCTATTTGTTA
CCGGCCGGGTCCCGGTTAATTTTTAAAACTCTCAGCCATGCCCCAAAATA
GCCCAGTAGCCCTAGGGTGTCCCACGGTGCCACGTAGGGTTCACGCCCAA
AAGTGAATAAAAACAGCCCATGAACTACCTGGCAGGGCCCCTTTTTCGAA
TTGCGACTGTACCATATCTGACAGCAATCAATGTCCAACATGTTTCCACC
CTTCCAACATGTTTGATGTAAATGTTTCTTCTTAAAACTCCAGAGTTGAA
GAAATCTGGGAACCTAAGATGGAAGGTCTGGACAGGTAGGAGTATTAACA
TTATCATAGTTTTCACAATATTTAGATGGAAACTGATTTGTGGCAGCATT
CTTATATGATAAGATTACATTGTTTTGTGACATGAGCCATCTAGAAAAAC
TCTAGATATGAATATTCCTTGTGTATTTCTTTTAACAGAATTTATTAGTT
TGCTGCCATGTTTCTTTTAGGTTGAAGGTGAAGAGACAAATTCCTGCCAT
TTCCATTCTTCTGTCAAAAGATGCCTTGGACAAAGATGAACAAGGGTAGG
TCAGGTCTGCATGGGGTTAGAAATTAAAAGCTACACATTTCTGAGTTATT
TTGTCTGTCAATGAATGGATGGACCTAGACTTGATTCAATTCTTGACCTG
GGTCTAGAAAATTAATATTGCATTTCTGATAATGGTCCTGAAAAAATGTG
TTTCTGATTATGGTCTTGAAAAAATTAGAGTTGTTAGGTAGGGATTGTCT
TTTTTTTCTACATTCAGCCATCAACATAATGGGGTATCAGCATAAAGGGA
AGCTAGGTGGCGTGCTTATATCACTTTTTCTATTTCAACAGAAATGATGA
AAACCTACGATTCAACAATATTTTCATCACTCAGATGTCAGAAAGTTTTA
TGCCCCTAGCCAGCGGTTCACCCCCAAACAAGACTTGGGTCGCCTGGTTT
CCGCTAGGGTCAGTAAGGTAACAGAAAATACAATTATTTTCCTAGGACCT
GCAATAAACTTGACAGAAAAATGAGTGAATATTCTGTCTTTAAATCACGA
CTCTTGTTTCTCCAGTTACCAGGCTCCAGGAACCTACGACTCACTGTGGA
ACGCAGAATCTCAACAGAACCGGTCCAAACCTGCCAAGAAGAGGGGACCA
CCCAGTAATGCTCGAGGAGGGGGACAGAAGTCCAAATCTCCCAAACCAGA
TGGAACTCCGAGTAGCAAGAAACAAGGGGGGAGGGGGCAGGGGAGAGGGG
GAGACAGACAGCAGGGGAAAGTACAAGACAGAGGACAGCAGAAGACTTAG
Coding sequence (CDS) from alignment at Sc0000067:552838..556087- >transcript:BL95594_evm0 ID=transcript:BL95594_evm0|Name=transcript:BL95594_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4452bp|location=Sequence derived from alignment at Sc0000067:552838..556087- (Branchiostoma lanceolatum)
ATGTGCAGTGTCAAAGTGGAGAATTATGAGAAGGGGGAGGTGGTGGCCGT
CCCAGACGACACCCCCACACCCTGGGGGGACGACGTTCTGGAGATGAAGG
TCCAGCATGGCAGCAAAGTACGGAACCTCATGGGGTTTGCTGTCAGGAAG
TTTAAGGATGAGACAGTGAGACAAATCGTGTGGTCAGGTTCAGACAAGGC
CATCTCCAAGACTGTCACATGTGCAGAGATACTCAAGAGGAAGTTCAAGA
ATATCCATCAAATAACCAAGATTAAATACAAAATAGTTGAAGAAATCTGG
GAACCTAAGATGGAAGGTCTGGACAGGTTGAAGGTGAAGAGACAAATTCC
TGCCATTTCCATTCTTCTGTCAAAAGATGCCTTGGACAAAGATGAACAAG
GTTACCAGGCTCCAGGAACCTACGACTCACTGTGGAACGCAGAATCTCAA
CAGAACCGGTCCAAACCTGCCAAGAAGAGGGGACCACCCAGTAATGCTCG
AGGAGGGGGACAGAAGTCCAAATCTCCCAAACCAGATGGAACTCCGAGTA
GCAAGAAACAAGGGGGGAGGGGGCAGGGGAGAGGGGGAGACAGACAGCAG
GGGAAAGTACAAGACAGAGGACAGCAGAAGACTTAGATGTGCAGTGTCAA
AGTGGAGAATTATGAGAAGGGGGAGGTGGTGGCCGTCCCAGACGACACCC
CCACACCCTGGGGGGACGACGTTCTGGAGATGAAGGTCCAGCATGGCAGC
AAAGTACGGAACCTCATGGGGTTTGCTGTCAGGAAGTTTAAGGATGAGAC
AGTGAGACAAATCGTGTGGTCAGGTTCAGACAAGGCCATCTCCAAGACTG
TCACATGTGCAGAGATACTCAAGAGGAAGTTCAAGAATATCCATCAAATA
ACCAAGATTAAATACAAAATAGTTGAAGAAATCTGGGAACCTAAGATGGA
AGGTCTGGACAGGTTGAAGGTGAAGAGACAAATTCCTGCCATTTCCATTC
TTCTGTCAAAAGATGCCTTGGACAAAGATGAACAAGGTTACCAGGCTCCA
GGAACCTACGACTCACTGTGGAACGCAGAATCTCAACAGAACCGGTCCAA
ACCTGCCAAGAAGAGGGGACCACCCAGTAATGCTCGAGGAGGGGGACAGA
AGTCCAAATCTCCCAAACCAGATGGAACTCCGAGTAGCAAGAAACAAGGG
GGGAGGGGGCAGGGGAGAGGGGGAGACAGACAGCAGGGGAAAGTACAAGA
CAGAGGACAGCAGAAGACTTAGATGTGCAGTGTCAAAGTGGAGAATTATG
AGAAGGGGGAGGTGGTGGCCGTCCCAGACGACACCCCCACACCCTGGGGG
GACGACGTTCTGGAGATGAAGGTCCAGCATGGCAGCAAAGTACGGAACCT
CATGGGGTTTGCTGTCAGGAAGTTTAAGGATGAGACAGTGAGACAAATCG
TGTGGTCAGGTTCAGACAAGGCCATCTCCAAGACTGTCACATGTGCAGAG
ATACTCAAGAGGAAGTTCAAGAATATCCATCAAATAACCAAGATTAAATA
CAAAATAGTTGAAGAAATCTGGGAACCTAAGATGGAAGGTCTGGACAGGT
TGAAGGTGAAGAGACAAATTCCTGCCATTTCCATTCTTCTGTCAAAAGAT
GCCTTGGACAAAGATGAACAAGGTTACCAGGCTCCAGGAACCTACGACTC
ACTGTGGAACGCAGAATCTCAACAGAACCGGTCCAAACCTGCCAAGAAGA
GGGGACCACCCAGTAATGCTCGAGGAGGGGGACAGAAGTCCAAATCTCCC
AAACCAGATGGAACTCCGAGTAGCAAGAAACAAGGGGGGAGGGGGCAGGG
GAGAGGGGGAGACAGACAGCAGGGGAAAGTACAAGACAGAGGACAGCAGA
AGACTTAGATGTGCAGTGTCAAAGTGGAGAATTATGAGAAGGGGGAGGTG
GTGGCCGTCCCAGACGACACCCCCACACCCTGGGGGGACGACGTTCTGGA
GATGAAGGTCCAGCATGGCAGCAAAGTACGGAACCTCATGGGGTTTGCTG
TCAGGAAGTTTAAGGATGAGACAGTGAGACAAATCGTGTGGTCAGGTTCA
GACAAGGCCATCTCCAAGACTGTCACATGTGCAGAGATACTCAAGAGGAA
GTTCAAGAATATCCATCAAATAACCAAGATTAAATACAAAATAGTTGAAG
AAATCTGGGAACCTAAGATGGAAGGTCTGGACAGGTTGAAGGTGAAGAGA
CAAATTCCTGCCATTTCCATTCTTCTGTCAAAAGATGCCTTGGACAAAGA
TGAACAAGGTTACCAGGCTCCAGGAACCTACGACTCACTGTGGAACGCAG
AATCTCAACAGAACCGGTCCAAACCTGCCAAGAAGAGGGGACCACCCAGT
AATGCTCGAGGAGGGGGACAGAAGTCCAAATCTCCCAAACCAGATGGAAC
TCCGAGTAGCAAGAAACAAGGGGGGAGGGGGCAGGGGAGAGGGGGAGACA
GACAGCAGGGGAAAGTACAAGACAGAGGACAGCAGAAGACTTAGATGTGC
AGTGTCAAAGTGGAGAATTATGAGAAGGGGGAGGTGGTGGCCGTCCCAGA
CGACACCCCCACACCCTGGGGGGACGACGTTCTGGAGATGAAGGTCCAGC
ATGGCAGCAAAGTACGGAACCTCATGGGGTTTGCTGTCAGGAAGTTTAAG
GATGAGACAGTGAGACAAATCGTGTGGTCAGGTTCAGACAAGGCCATCTC
CAAGACTGTCACATGTGCAGAGATACTCAAGAGGAAGTTCAAGAATATCC
ATCAAATAACCAAGATTAAATACAAAATAGTTGAAGAAATCTGGGAACCT
AAGATGGAAGGTCTGGACAGGTTGAAGGTGAAGAGACAAATTCCTGCCAT
TTCCATTCTTCTGTCAAAAGATGCCTTGGACAAAGATGAACAAGGTTACC
AGGCTCCAGGAACCTACGACTCACTGTGGAACGCAGAATCTCAACAGAAC
CGGTCCAAACCTGCCAAGAAGAGGGGACCACCCAGTAATGCTCGAGGAGG
GGGACAGAAGTCCAAATCTCCCAAACCAGATGGAACTCCGAGTAGCAAGA
AACAAGGGGGGAGGGGGCAGGGGAGAGGGGGAGACAGACAGCAGGGGAAA
GTACAAGACAGAGGACAGCAGAAGACTTAGATGTGCAGTGTCAAAGTGGA
GAATTATGAGAAGGGGGAGGTGGTGGCCGTCCCAGACGACACCCCCACAC
CCTGGGGGGACGACGTTCTGGAGATGAAGGTCCAGCATGGCAGCAAAGTA
CGGAACCTCATGGGGTTTGCTGTCAGGAAGTTTAAGGATGAGACAGTGAG
ACAAATCGTGTGGTCAGGTTCAGACAAGGCCATCTCCAAGACTGTCACAT
GTGCAGAGATACTCAAGAGGAAGTTCAAGAATATCCATCAAATAACCAAG
ATTAAATACAAAATAGTTGAAGAAATCTGGGAACCTAAGATGGAAGGTCT
GGACAGGTTGAAGGTGAAGAGACAAATTCCTGCCATTTCCATTCTTCTGT
CAAAAGATGCCTTGGACAAAGATGAACAAGGTTACCAGGCTCCAGGAACC
TACGACTCACTGTGGAACGCAGAATCTCAACAGAACCGGTCCAAACCTGC
CAAGAAGAGGGGACCACCCAGTAATGCTCGAGGAGGGGGACAGAAGTCCA
AATCTCCCAAACCAGATGGAACTCCGAGTAGCAAGAAACAAGGGGGGAGG
GGGCAGGGGAGAGGGGGAGACAGACAGCAGGGGAAAGTACAAGACAGAGG
ACAGCAGAAGACTTAGATGTGCAGTGTCAAAGTGGAGAATTATGAGAAGG
GGGAGGTGGTGGCCGTCCCAGACGACACCCCCACACCCTGGGGGGACGAC
GTTCTGGAGATGAAGGTCCAGCATGGCAGCAAAGTACGGAACCTCATGGG
GTTTGCTGTCAGGAAGTTTAAGGATGAGACAGTGAGACAAATCGTGTGGT
CAGGTTCAGACAAGGCCATCTCCAAGACTGTCACATGTGCAGAGATACTC
AAGAGGAAGTTCAAGAATATCCATCAAATAACCAAGATTAAATACAAAAT
AGTTGAAGAAATCTGGGAACCTAAGATGGAAGGTCTGGACAGGTTGAAGG
TGAAGAGACAAATTCCTGCCATTTCCATTCTTCTGTCAAAAGATGCCTTG
GACAAAGATGAACAAGGTTACCAGGCTCCAGGAACCTACGACTCACTGTG
GAACGCAGAATCTCAACAGAACCGGTCCAAACCTGCCAAGAAGAGGGGAC
CACCCAGTAATGCTCGAGGAGGGGGACAGAAGTCCAAATCTCCCAAACCA
GATGGAACTCCGAGTAGCAAGAAACAAGGGGGGAGGGGGCAGGGGAGAGG
GGGAGACAGACAGCAGGGGAAAGTACAAGACAGAGGACAGCAGAAGACTT
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000067 | genome | Sc0000067:552838..556087 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95594_evm0 |
| Biotype | protein_coding |
|
