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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95578_evm1 >transcript:BL95578_evm1-protein ID=transcript:BL95578_evm1-protein|Name=transcript:BL95578_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=193bp
MSRIAVLVLLVTIWTTASAERCGSGFTSFSCPRTFLDDSDEKYCCRNNKC
CDNCWESTVSTSSCTGSNISDTIGKALRLGIGAIVGIIVGCIVVVIIIIV
ACVFCCCACAKGSSQRSQPQAVQMAPAAQPVQYPPGQYAQYPPASPCSIH
LASMPSTPLRSTPLDSPQPTRRTQPTRRTQRTHQARFRQEPAV Run BLAST on NCBI mRNA from alignment at Sc0000063:1414483..1417486+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95578_evm1 ID=transcript:BL95578_evm1|Name=transcript:BL95578_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3004bp|location=Sequence derived from alignment at Sc0000063:1414483..1417486+ (Branchiostoma lanceolatum)
ATGAGCCGGATAGCCGTGTTGGTTTTGTTGGTCACTATCTGGACAACAGG
TAAGTACATACGTGATACTCATGTTAACCAAGTAGTGACGGATCAACTGG
GTGTGGATCAGGACAAGTATGATGTTCATGTCGTGTATGTACATCAGGGT
CAGAACGATATAAATCTACATAAAGTCAACTAGATTTTGATTTCGCAGCT
AGCTTGGAATCTAAGAAGTCGGTGTGCTCTTACAGTAATTAGTTGCACCA
TGTACAGACAAGGGTACGAAAAAAATGCGTCGCCTCCAATTGTAAAATGT
GTAAAGACGAGCGAGTTATTTTGCCAAGGGTGCAGACATCAATGCAGTGT
TAGTATCGGGATTATAAGAAAATATTGATTGCTTTTCATTTCTTTTAATA
CCTCCCGAACTGTGTAACACTGTTGTAACAAGGAAACGTTGAGGCGGAAG
TTCTAGCCACTTGGTCTTATTGTTTGTCTTATTGTTAAAACATGCAAGTC
ATTCACTACAATAATGTTTTCTTTGGTGGTCAGATTCATATCTTAGCTGG
TACCAAGCGTATATTTTGTAATGTACATTGTAGCTCCTTAGCACAAGCAA
TAAATATAGACAAGCTTCGCTGCGGCTTTAAAGAATTTCTGGCATTTTTT
TAATAACAGCATTTGTTGTTGATATGAATGTGTGAACAGTTGAATAGATA
CCAACCAAAATGAACCTATTGAATGAAATAACGTGCTGGCTATGTGCCAC
ATATGCAACACATAAAGTTGTAACATCGCGATCTGGTACAGCTAGTTCCT
ACAAAGGTCACTGGACAATAGTGTAGAATCACCGCGTCCTTTGTTGGGTG
GGGCGTCAGTCGAAAGTTGCAGAACGAGTTTCTCTTCGACTTAATTATTC
ATGCGTTCATTCCTTTGGAATGTTATTTACTCAGGGCTTAACAGTGTAAG
GCGTATGGAAATTTGCCAAAATAAGGAATCTAATAGAAGAGTGGATTTGA
AAGTTACGCTTAAAATCTGATGGTTGAATGCACATATTTTCACTAAAAGC
ATCTGATAGTAAAATAAAAACTAGCATATGAAAAGCCTAGATATCTGTTT
ACTCTGGTGAGCGTCTTCACCCTTACAACATACTAAAAGATATTCTACCA
GAGTAGAAATGTTTGATGAAAAGTACAAATACGTTTGGAACATCTTTGGT
TATAACTTGTTGCTGCTTTGAATGTGCAGTTATAAAACCGTCGATAGGTG
GCATAGATCTCACACTGGCAAAGAGATTGAGCACCTTCTTTTTGAATGCA
TCCATTTCATTTCACTTTGGAAATGTTGATAAAGGGATCATAACAAGAAC
AAGTTCGAAGAAAGGCAGAAAAAGAGTGCTGTTGTTATGCTGGAATCCGA
CAAAAATGATGGATTTTTACACTCTTGTGTACTGAGGTGGAAAGACTGAT
GTACGAGATAGTGCAGTACTCATCTAGTGACTATGCTAACACTTGATTCT
TTACCGACCATCAGCTTCTGCAGAGCGATGTGGGTCTGGATTTACCAGTT
TCAGCTGCCCACGCACGTTTCTTGATGACAGCGATGAGAAATACTGCTGC
AGAAATAACAAGTGCTGTGACAACTGCTGGGAATCTACAGTGTCCACCTC
ATCTTGTACTGGGTCCAACATCAGCGACACCATTGGCAAGGCGCTTCGAC
TTGGGTAATTTTTATTCACTCTGCTTATCTTAGGCCATGTTGATTCGATT
ATATGGATGCCATCCTCTAGGAGCCCCAGGACCGATACAAGTGCGCGAAT
AAAATGTTTTGCAGAAGAAAAAAAATGCCTTCTTTGTGAAGTCTAAGTGG
TCAGGAAGGTTGAAAAAATGACTAAATACAAAGAGTATGGTATACCGAAT
GACAGATTCTATTTTTGTTCTTGCACATCTTCTTCTTTGACTTTGGTATT
GTACGACTTGAGAATCCGTTTTCTTATATTTTTTTGTAATCTATGGAATT
TCTTTGCTCATTTTGCAGCTGCTTTGTATGGTGTACAGAATGGTCGAAAC
GGACAAAAATTGATTCTCGCACGGATGTCCTCCATAAATGGCCTTACGAA
TACATAAAATGACATCAGCTATACTAGATGGTTTATATGTTCGAAATGAA
GACGAATGGCGATCAATTTGACACGTATATAACTACTCTCATCATATTCT
AATTCAAATGCAAATGTTTCAAATCTGGAATTGTTGTTCATGTTATGAGG
AAAACAAAACCTGAAAATATCCTGTGTCGTCCCAGTATCGGCGCCATCGT
CGGCATCATAGTGGGATGTATCGTCGTGGTCATCATCATTATTGTAGCCT
GTGTCTTCTGCTGCTGCGCATGCGCCAAGGGGTCCAGTCAGAGAAGTCAA
CCACAGGGTAAGATCCACACATTCAGGTTCACGACAGGGGTTAAGGGTTA
GTCAAAGTTGGTCCCCTCAACTCGCTATCTCAACCCGAGAAATGATGAGA
TTATCCTTTCTTCCTGTGGAATCAGTTTTGCACCATGCATGTTACGTATT
AGAGATAGAAAATGTTCAATTCAATGACCTGCTTTGTATGAAACACATTA
CCTGGCAAACACGGCATCTCCGTCCAAGTGTAGGACATGCTTTCTACTTT
TATTAATTACTCTGTGTTTGTTCACCTCTTCTGCTATCTTCTACTTCAGT
TTCCACCATGTCATGTATATTGCAATCTGTTTGTGTGGTCGTTGTTGTGG
TATAACATTGAGACATCACTTTTTGCCCCACAGCTGTCCAAATGGCTCCA
GCTGCCCAGCCCGTGCAGTATCCGCCTGGCCAGTATGCCCAGTACCCCCC
TGCNAGCCCGTGCAGTATCCACCTGGCCAGTATGCCCAGTACCCCCCTGC
GCAGTACCCCCCTGGACAGCCCCCAGCCTACCCGCAGAACCCAGCCTACC
CGCAGAACCCAGCGTACCCACCAGGCAAGATTTAGGCAAGAACCTGCAGT
GTGA Coding sequence (CDS) from alignment at Sc0000063:1414483..1417486+ >transcript:BL95578_evm1 ID=transcript:BL95578_evm1|Name=transcript:BL95578_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2328bp|location=Sequence derived from alignment at Sc0000063:1414483..1417486+ (Branchiostoma lanceolatum)
ATGAGCCGGATAGCCGTGTTGGTTTTGTTGGTCACTATCTGGACAACAGC
TTCTGCAGAGCGATGTGGGTCTGGATTTACCAGTTTCAGCTGCCCACGCA
CGTTTCTTGATGACAGCGATGAGAAATACTGCTGCAGAAATAACAAGTGC
TGTGACAACTGCTGGGAATCTACAGTGTCCACCTCATCTTGTACTGGGTC
CAACATCAGCGACACCATTGGCAAGGCGCTTCGACTTGGTATCGGCGCCA
TCGTCGGCATCATAGTGGGATGTATCGTCGTGGTCATCATCATTATTGTA
GCCTGTGTCTTCTGCTGCTGCGCATGCGCCAAGGGGTCCAGTCAGAGAAG
TCAACCACAGGCTGTCCAAATGGCTCCAGCTGCCCAGCCCGTGCAGTATC
CGCCTGGCCAGTATGCCCAGTACCCCCCTGCNAGCCCGTGCAGTATCCAC
CTGGCCAGTATGCCCAGTACCCCCCTGCGCAGTACCCCCCTGGACAGCCC
CCAGCCTACCCGCAGAACCCAGCCTACCCGCAGAACCCAGCGTACCCACC
AGGCAAGATTTAGGCAAGAACCTGCAGTGTGAATGAGCCGGATAGCCGTG
TTGGTTTTGTTGGTCACTATCTGGACAACAGCTTCTGCAGAGCGATGTGG
GTCTGGATTTACCAGTTTCAGCTGCCCACGCACGTTTCTTGATGACAGCG
ATGAGAAATACTGCTGCAGAAATAACAAGTGCTGTGACAACTGCTGGGAA
TCTACAGTGTCCACCTCATCTTGTACTGGGTCCAACATCAGCGACACCAT
TGGCAAGGCGCTTCGACTTGGTATCGGCGCCATCGTCGGCATCATAGTGG
GATGTATCGTCGTGGTCATCATCATTATTGTAGCCTGTGTCTTCTGCTGC
TGCGCATGCGCCAAGGGGTCCAGTCAGAGAAGTCAACCACAGGCTGTCCA
AATGGCTCCAGCTGCCCAGCCCGTGCAGTATCCGCCTGGCCAGTATGCCC
AGTACCCCCCTGCNAGCCCGTGCAGTATCCACCTGGCCAGTATGCCCAGT
ACCCCCCTGCGCAGTACCCCCCTGGACAGCCCCCAGCCTACCCGCAGAAC
CCAGCCTACCCGCAGAACCCAGCGTACCCACCAGGCAAGATTTAGGCAAG
AACCTGCAGTGTGAATGAGCCGGATAGCCGTGTTGGTTTTGTTGGTCACT
ATCTGGACAACAGCTTCTGCAGAGCGATGTGGGTCTGGATTTACCAGTTT
CAGCTGCCCACGCACGTTTCTTGATGACAGCGATGAGAAATACTGCTGCA
GAAATAACAAGTGCTGTGACAACTGCTGGGAATCTACAGTGTCCACCTCA
TCTTGTACTGGGTCCAACATCAGCGACACCATTGGCAAGGCGCTTCGACT
TGGTATCGGCGCCATCGTCGGCATCATAGTGGGATGTATCGTCGTGGTCA
TCATCATTATTGTAGCCTGTGTCTTCTGCTGCTGCGCATGCGCCAAGGGG
TCCAGTCAGAGAAGTCAACCACAGGCTGTCCAAATGGCTCCAGCTGCCCA
GCCCGTGCAGTATCCGCCTGGCCAGTATGCCCAGTACCCCCCTGCNAGCC
CGTGCAGTATCCACCTGGCCAGTATGCCCAGTACCCCCCTGCGCAGTACC
CCCCTGGACAGCCCCCAGCCTACCCGCAGAACCCAGCCTACCCGCAGAAC
CCAGCGTACCCACCAGGCAAGATTTAGGCAAGAACCTGCAGTGTGAATGA
GCCGGATAGCCGTGTTGGTTTTGTTGGTCACTATCTGGACAACAGCTTCT
GCAGAGCGATGTGGGTCTGGATTTACCAGTTTCAGCTGCCCACGCACGTT
TCTTGATGACAGCGATGAGAAATACTGCTGCAGAAATAACAAGTGCTGTG
ACAACTGCTGGGAATCTACAGTGTCCACCTCATCTTGTACTGGGTCCAAC
ATCAGCGACACCATTGGCAAGGCGCTTCGACTTGGTATCGGCGCCATCGT
CGGCATCATAGTGGGATGTATCGTCGTGGTCATCATCATTATTGTAGCCT
GTGTCTTCTGCTGCTGCGCATGCGCCAAGGGGTCCAGTCAGAGAAGTCAA
CCACAGGCTGTCCAAATGGCTCCAGCTGCCCAGCCCGTGCAGTATCCGCC
TGGCCAGTATGCCCAGTACCCCCCTGCNAGCCCGTGCAGTATCCACCTGG
CCAGTATGCCCAGTACCCCCCTGCGCAGTACCCCCCTGGACAGCCCCCAG
CCTACCCGCAGAACCCAGCCTACCCGCAGAACCCAGCGTACCCACCAGGC
AAGATTTAGGCAAGAACCTGCAGTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000063 | genome | Sc0000063:1414483..1417486 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95578_evm1 |
| Biotype | protein_coding |
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