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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95574_evm1 >transcript:BL95574_evm1-protein ID=transcript:BL95574_evm1-protein|Name=transcript:BL95574_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=223bp
MYRGAVRILPRHAKAVILAIPPPCYNRISLSPALPKAFHHITMGHVYRCT
LYYKTNFWGNGDSSVQLFADYPGCLIVNAFDDTVPGNKYPAFTATITGKK
AIKAREMTKEQRKDAFCQCLAKAFSSEEAMQPLDYLEKNWNKEEYIGGGF
SAYFPPGVLTCNKTIGWCRYNPTGRVFLAGTESSTRGYGSLEGAVWAGKR
AAEQVIAVVSQGADDGHPEKIEN Run BLAST on NCBI mRNA from alignment at Sc0000063:22534..25499+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95574_evm1 ID=transcript:BL95574_evm1|Name=transcript:BL95574_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2966bp|location=Sequence derived from alignment at Sc0000063:22534..25499+ (Branchiostoma lanceolatum)
ATGTATCGCGGAGCGGTTAGAATTCTACCGCGGCACGTAAGGAAATGTAT
CTCGGACCGGTTGGAAATGCCTCGGACCGGTTGGAATCATGCCTCGGACC
GGTTGGAATCATGACTCGGACCGGTAATAATTGAGTTGAGGAAGCTGTCT
AGAATTGTCGTTTTGGTCTTTGGTATCCCTGACTCCTGATAATGTTCCCC
CAGGCTAAAGCTGTGATCCTGGCTATCCCTCCTCCATGTTACAATAGGAT
TAGCCTCTCCCCAGCCTTGCCCAAGGCCTTCCACCACATCACCATGGGCC
ATGTCTACAGATGCACTCTGTACTACAAGACTAACTTCTGGGGAAATGGA
GGTTAGTCAAACTTCAAAGTTAAGATACGGAATACATGTTGGATGAGAAA
AACTTAAGGTCTAGTGGAAATTAAAATCTGGTACTGTGCAATTTCTTGCC
CAGGAATTGTGTTTTAACTGGCAAACTATCAGGCTTAACTTGGAGTATCC
AAAAGTTGAATGACTCTTGACTACGTAACACTCTGTTACATAATTCGTCT
GTCTAGACTGAAATCTGTTTGACGTATGTATCCTTCCCTTTTTCGTGCTT
CAATACTTCATTTGAATGCCTTTCCTGGTAATGAATTAAAAGGATTGTGA
TTTTTCCCTTCAAATATTTAATTCTGATATTCATTAGTGTCTGTCAGTAT
CTATTAATCATATCATCAATGGTCAGATAATTTGAGACTTACTATGAGGG
AAATTTTGCTGCTTGCATCTTGCAGATAGCTCAGTGCAGCTGTTTGCGGA
CTATCCTGGTTGTCTCATTGTGAATGCCTTTGACGACACTGTTCCTGGCA
ACAAGTATCCCGCATTCACTGCGTAGGCTCGCACACTTTTATTTTGACTT
AAAGGCCATCATTTCTTTGTAACAACAATATTGCTATCTTTTGTGAGCTT
CACATACAGAATACAATGTAAGTCATTGAGACTCCCTTAAGTTTTTCATA
TACACACCTGATTCTGAGTATGTTCACTAATTAAAGATCTTGCACCATGC
AGTACCCAGAATAATTGCTGCAAAGTTAAATCTTCAAACTTGCTGACTCA
TTGCTATTGTGGCACATGTACATGTAAGAAGATTCTGGTTGTCTATTTCC
TCTATGGCTTATGTTATAACGTCTTCATCCCCCAACCCACACCCTGGCTG
CATGTATGTCATATATCATTTGAAAGTTTACATGATTTCATGATACTTCT
TGGTTATTTTGTTCCACGTACAGGACAATTACAGGTAAAAAGGCCATCAA
AGCAAGGGAGATGACTAAGGAACAAAGGTGACGAGAGTCAAGAACCACTT
TTAAGTGTTTTAGAAACTCTAAAAGTGTGACAGGTCAATCTAATTGGCTG
AAGACCATTTTCTCAAATGACACTTAAATGCCAATTAGATTGACCCTTTC
AAAGTACTTTGTCAACTTCAACAACACATTGTATAATGATTATCTGAGCA
TACCTGATACCTATGCTACCTGAATTAACAGTCAATTCAGTCTCAACTTA
TTTCATTATGTTGGTCACCATTATCTCTTAGGATTCTTGTTGGAAACAAG
TGTGGAACAATGCAAAAATGTATTTATCTGATTAATATATATACATATGA
ACCAGCACTCAGTCTGTTTCTTTCCTCCAGGAAAGATGCCTTCTGCCAGT
GTTTGGCCAAAGCTTTTTCTTCAGAAGAAGCCATGCAGGTGTGTGGGTGA
TATACTGTTACAATAACTGTAATTACCATACAGTGGAGACTGTCCCTTCA
GCAGTTGGGAACAGACTATGGTGGACTACATGTAGCTGGAATGATGAATT
CAAAGTTGTTGTGGGTTTTTTTTGCTTCCTTTTTTTCTATTTGGTACTTA
TAATTAGCAGAGCTCAAGATTCAGTATGATAGAATACCGTGACACTAGTA
CTATATGAGTATTAACTCCTCAGATGAATATTCACACATTCTATGTTTTA
TGCCATGTGACATGTAAGTAAGTAAGGCATTCTCTCCTGGACAGCCCTTG
GATTACCTGGAGAAGAACTGGAACAAGGAGGAGTACATCGGAGGTGGTTT
CTCCGCATATTTCCCACCTGGTGTCCTCACCTGCAATAAGACCATTGGAT
GGTTAAGTTTTTCCTTAACAGTTATCACTTGCAACATTCTGAAGTTGGCT
TGTAGTGACATTTGATGGCTCGAATTATTTCTTAAGCTGTTTAACTTAAT
GACCAGGAAGTGAAAATGACAGCCTTTGTTACTTATCATGTGGTAGTAAC
AGTTTCAATATGATCCTACTTTAAATTTCTTTCTCTCTCTCTGCCGTATT
CTGGGTTGTAGGTGCAGGTACAACCCTACAGGCAGAGTGTTCCTAGCTGG
GACAGAATCATCCACACGAGGATATGGCAGCCTGGAAGGAGCTGTCTGGG
CCGGTAAGAGAGCAGCTGAGCAGGTAAGGTCAATCAGATTCTAACTTGTA
ATGACTCTTCCAGCAACATCTTTGTTTTAGGCCCAAGACTTTGGTATTGA
AGACCTACACATTACCAAGAATGGCCCACAATTTTGAAAAAAAATATGAT
TGATGAGAAATATACACTAACATGACAGTATGTATGAAGTTAGGGATTCC
ATCCCAGGTTCCTCAGACTAGTAATTGGTAGAATGAGACAGTTAATCTTA
CTCCCGGTAATGAGATGCCATTGCACATTCAGTTTTTTGAAAGAGAAGAA
GACAAATATAATGGTGAATATCTGAAACCCCAGGTGCTTTTTATAGCTGT
TATTATGTTAGGTTCTGACTATCTTATGGATGGTTAAACAGGCCGTGGGG
CTGATGATGACTAAGTTGTTTAGTGTCTGTGTTCAACTAAGTTTTTTGTC
TTGTAGGTGATTGCAGTTGTTTCACAAGGTGCTGATGATGGCCATCCTGA
GAAAATAGAGAATTAA Coding sequence (CDS) from alignment at Sc0000063:22534..25499+ >transcript:BL95574_evm1 ID=transcript:BL95574_evm1|Name=transcript:BL95574_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5376bp|location=Sequence derived from alignment at Sc0000063:22534..25499+ (Branchiostoma lanceolatum)
ATGTATCGCGGAGCGGTTAGAATTCTACCGCGGCACGCTAAAGCTGTGAT
CCTGGCTATCCCTCCTCCATGTTACAATAGGATTAGCCTCTCCCCAGCCT
TGCCCAAGGCCTTCCACCACATCACCATGGGCCATGTCTACAGATGCACT
CTGTACTACAAGACTAACTTCTGGGGAAATGGAGATAGCTCAGTGCAGCT
GTTTGCGGACTATCCTGGTTGTCTCATTGTGAATGCCTTTGACGACACTG
TTCCTGGCAACAAGTATCCCGCATTCACTGCGACAATTACAGGTAAAAAG
GCCATCAAAGCAAGGGAGATGACTAAGGAACAAAGGAAAGATGCCTTCTG
CCAGTGTTTGGCCAAAGCTTTTTCTTCAGAAGAAGCCATGCAGCCCTTGG
ATTACCTGGAGAAGAACTGGAACAAGGAGGAGTACATCGGAGGTGGTTTC
TCCGCATATTTCCCACCTGGTGTCCTCACCTGCAATAAGACCATTGGATG
GTGCAGGTACAACCCTACAGGCAGAGTGTTCCTAGCTGGGACAGAATCAT
CCACACGAGGATATGGCAGCCTGGAAGGAGCTGTCTGGGCCGGTAAGAGA
GCAGCTGAGCAGGTGATTGCAGTTGTTTCACAAGGTGCTGATGATGGCCA
TCCTGAGAAAATAGAGAATTAAATGTATCGCGGAGCGGTTAGAATTCTAC
CGCGGCACGCTAAAGCTGTGATCCTGGCTATCCCTCCTCCATGTTACAAT
AGGATTAGCCTCTCCCCAGCCTTGCCCAAGGCCTTCCACCACATCACCAT
GGGCCATGTCTACAGATGCACTCTGTACTACAAGACTAACTTCTGGGGAA
ATGGAGATAGCTCAGTGCAGCTGTTTGCGGACTATCCTGGTTGTCTCATT
GTGAATGCCTTTGACGACACTGTTCCTGGCAACAAGTATCCCGCATTCAC
TGCGACAATTACAGGTAAAAAGGCCATCAAAGCAAGGGAGATGACTAAGG
AACAAAGGAAAGATGCCTTCTGCCAGTGTTTGGCCAAAGCTTTTTCTTCA
GAAGAAGCCATGCAGCCCTTGGATTACCTGGAGAAGAACTGGAACAAGGA
GGAGTACATCGGAGGTGGTTTCTCCGCATATTTCCCACCTGGTGTCCTCA
CCTGCAATAAGACCATTGGATGGTGCAGGTACAACCCTACAGGCAGAGTG
TTCCTAGCTGGGACAGAATCATCCACACGAGGATATGGCAGCCTGGAAGG
AGCTGTCTGGGCCGGTAAGAGAGCAGCTGAGCAGGTGATTGCAGTTGTTT
CACAAGGTGCTGATGATGGCCATCCTGAGAAAATAGAGAATTAAATGTAT
CGCGGAGCGGTTAGAATTCTACCGCGGCACGCTAAAGCTGTGATCCTGGC
TATCCCTCCTCCATGTTACAATAGGATTAGCCTCTCCCCAGCCTTGCCCA
AGGCCTTCCACCACATCACCATGGGCCATGTCTACAGATGCACTCTGTAC
TACAAGACTAACTTCTGGGGAAATGGAGATAGCTCAGTGCAGCTGTTTGC
GGACTATCCTGGTTGTCTCATTGTGAATGCCTTTGACGACACTGTTCCTG
GCAACAAGTATCCCGCATTCACTGCGACAATTACAGGTAAAAAGGCCATC
AAAGCAAGGGAGATGACTAAGGAACAAAGGAAAGATGCCTTCTGCCAGTG
TTTGGCCAAAGCTTTTTCTTCAGAAGAAGCCATGCAGCCCTTGGATTACC
TGGAGAAGAACTGGAACAAGGAGGAGTACATCGGAGGTGGTTTCTCCGCA
TATTTCCCACCTGGTGTCCTCACCTGCAATAAGACCATTGGATGGTGCAG
GTACAACCCTACAGGCAGAGTGTTCCTAGCTGGGACAGAATCATCCACAC
GAGGATATGGCAGCCTGGAAGGAGCTGTCTGGGCCGGTAAGAGAGCAGCT
GAGCAGGTGATTGCAGTTGTTTCACAAGGTGCTGATGATGGCCATCCTGA
GAAAATAGAGAATTAAATGTATCGCGGAGCGGTTAGAATTCTACCGCGGC
ACGCTAAAGCTGTGATCCTGGCTATCCCTCCTCCATGTTACAATAGGATT
AGCCTCTCCCCAGCCTTGCCCAAGGCCTTCCACCACATCACCATGGGCCA
TGTCTACAGATGCACTCTGTACTACAAGACTAACTTCTGGGGAAATGGAG
ATAGCTCAGTGCAGCTGTTTGCGGACTATCCTGGTTGTCTCATTGTGAAT
GCCTTTGACGACACTGTTCCTGGCAACAAGTATCCCGCATTCACTGCGAC
AATTACAGGTAAAAAGGCCATCAAAGCAAGGGAGATGACTAAGGAACAAA
GGAAAGATGCCTTCTGCCAGTGTTTGGCCAAAGCTTTTTCTTCAGAAGAA
GCCATGCAGCCCTTGGATTACCTGGAGAAGAACTGGAACAAGGAGGAGTA
CATCGGAGGTGGTTTCTCCGCATATTTCCCACCTGGTGTCCTCACCTGCA
ATAAGACCATTGGATGGTGCAGGTACAACCCTACAGGCAGAGTGTTCCTA
GCTGGGACAGAATCATCCACACGAGGATATGGCAGCCTGGAAGGAGCTGT
CTGGGCCGGTAAGAGAGCAGCTGAGCAGGTGATTGCAGTTGTTTCACAAG
GTGCTGATGATGGCCATCCTGAGAAAATAGAGAATTAAATGTATCGCGGA
GCGGTTAGAATTCTACCGCGGCACGCTAAAGCTGTGATCCTGGCTATCCC
TCCTCCATGTTACAATAGGATTAGCCTCTCCCCAGCCTTGCCCAAGGCCT
TCCACCACATCACCATGGGCCATGTCTACAGATGCACTCTGTACTACAAG
ACTAACTTCTGGGGAAATGGAGATAGCTCAGTGCAGCTGTTTGCGGACTA
TCCTGGTTGTCTCATTGTGAATGCCTTTGACGACACTGTTCCTGGCAACA
AGTATCCCGCATTCACTGCGACAATTACAGGTAAAAAGGCCATCAAAGCA
AGGGAGATGACTAAGGAACAAAGGAAAGATGCCTTCTGCCAGTGTTTGGC
CAAAGCTTTTTCTTCAGAAGAAGCCATGCAGCCCTTGGATTACCTGGAGA
AGAACTGGAACAAGGAGGAGTACATCGGAGGTGGTTTCTCCGCATATTTC
CCACCTGGTGTCCTCACCTGCAATAAGACCATTGGATGGTGCAGGTACAA
CCCTACAGGCAGAGTGTTCCTAGCTGGGACAGAATCATCCACACGAGGAT
ATGGCAGCCTGGAAGGAGCTGTCTGGGCCGGTAAGAGAGCAGCTGAGCAG
GTGATTGCAGTTGTTTCACAAGGTGCTGATGATGGCCATCCTGAGAAAAT
AGAGAATTAAATGTATCGCGGAGCGGTTAGAATTCTACCGCGGCACGCTA
AAGCTGTGATCCTGGCTATCCCTCCTCCATGTTACAATAGGATTAGCCTC
TCCCCAGCCTTGCCCAAGGCCTTCCACCACATCACCATGGGCCATGTCTA
CAGATGCACTCTGTACTACAAGACTAACTTCTGGGGAAATGGAGATAGCT
CAGTGCAGCTGTTTGCGGACTATCCTGGTTGTCTCATTGTGAATGCCTTT
GACGACACTGTTCCTGGCAACAAGTATCCCGCATTCACTGCGACAATTAC
AGGTAAAAAGGCCATCAAAGCAAGGGAGATGACTAAGGAACAAAGGAAAG
ATGCCTTCTGCCAGTGTTTGGCCAAAGCTTTTTCTTCAGAAGAAGCCATG
CAGCCCTTGGATTACCTGGAGAAGAACTGGAACAAGGAGGAGTACATCGG
AGGTGGTTTCTCCGCATATTTCCCACCTGGTGTCCTCACCTGCAATAAGA
CCATTGGATGGTGCAGGTACAACCCTACAGGCAGAGTGTTCCTAGCTGGG
ACAGAATCATCCACACGAGGATATGGCAGCCTGGAAGGAGCTGTCTGGGC
CGGTAAGAGAGCAGCTGAGCAGGTGATTGCAGTTGTTTCACAAGGTGCTG
ATGATGGCCATCCTGAGAAAATAGAGAATTAAATGTATCGCGGAGCGGTT
AGAATTCTACCGCGGCACGCTAAAGCTGTGATCCTGGCTATCCCTCCTCC
ATGTTACAATAGGATTAGCCTCTCCCCAGCCTTGCCCAAGGCCTTCCACC
ACATCACCATGGGCCATGTCTACAGATGCACTCTGTACTACAAGACTAAC
TTCTGGGGAAATGGAGATAGCTCAGTGCAGCTGTTTGCGGACTATCCTGG
TTGTCTCATTGTGAATGCCTTTGACGACACTGTTCCTGGCAACAAGTATC
CCGCATTCACTGCGACAATTACAGGTAAAAAGGCCATCAAAGCAAGGGAG
ATGACTAAGGAACAAAGGAAAGATGCCTTCTGCCAGTGTTTGGCCAAAGC
TTTTTCTTCAGAAGAAGCCATGCAGCCCTTGGATTACCTGGAGAAGAACT
GGAACAAGGAGGAGTACATCGGAGGTGGTTTCTCCGCATATTTCCCACCT
GGTGTCCTCACCTGCAATAAGACCATTGGATGGTGCAGGTACAACCCTAC
AGGCAGAGTGTTCCTAGCTGGGACAGAATCATCCACACGAGGATATGGCA
GCCTGGAAGGAGCTGTCTGGGCCGGTAAGAGAGCAGCTGAGCAGGTGATT
GCAGTTGTTTCACAAGGTGCTGATGATGGCCATCCTGAGAAAATAGAGAA
TTAAATGTATCGCGGAGCGGTTAGAATTCTACCGCGGCACGCTAAAGCTG
TGATCCTGGCTATCCCTCCTCCATGTTACAATAGGATTAGCCTCTCCCCA
GCCTTGCCCAAGGCCTTCCACCACATCACCATGGGCCATGTCTACAGATG
CACTCTGTACTACAAGACTAACTTCTGGGGAAATGGAGATAGCTCAGTGC
AGCTGTTTGCGGACTATCCTGGTTGTCTCATTGTGAATGCCTTTGACGAC
ACTGTTCCTGGCAACAAGTATCCCGCATTCACTGCGACAATTACAGGTAA
AAAGGCCATCAAAGCAAGGGAGATGACTAAGGAACAAAGGAAAGATGCCT
TCTGCCAGTGTTTGGCCAAAGCTTTTTCTTCAGAAGAAGCCATGCAGCCC
TTGGATTACCTGGAGAAGAACTGGAACAAGGAGGAGTACATCGGAGGTGG
TTTCTCCGCATATTTCCCACCTGGTGTCCTCACCTGCAATAAGACCATTG
GATGGTGCAGGTACAACCCTACAGGCAGAGTGTTCCTAGCTGGGACAGAA
TCATCCACACGAGGATATGGCAGCCTGGAAGGAGCTGTCTGGGCCGGTAA
GAGAGCAGCTGAGCAGGTGATTGCAGTTGTTTCACAAGGTGCTGATGATG
GCCATCCTGAGAAAATAGAGAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000063 | genome | Sc0000063:22534..25499 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95574_evm1 |
| Biotype | protein_coding |
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