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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95559_evm1 >transcript:BL95559_evm1-protein ID=transcript:BL95559_evm1-protein|Name=transcript:BL95559_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=206bp
MLETMGWIVNAVGVAVVGMVAVNLNFWLPKHIPAQLVHIADAALEELDSN
KRKLQAKELWKNHGAVIMAEALGLSSLKPQLDQAGVPLYAVVHERRGVPE
FQPYFQGKVFLDLERRFYGPHERWMSLAGLLRVNFWLNIRRSMEKKVEGN
REGEGRLLGGVFVVGSGNQGILLQHAEEEFGHHANLTDVMNAVEKIQHIR
AQKSKI Run BLAST on NCBI mRNA from alignment at Sc0000060:918603..921889+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95559_evm1 ID=transcript:BL95559_evm1|Name=transcript:BL95559_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3287bp|location=Sequence derived from alignment at Sc0000060:918603..921889+ (Branchiostoma lanceolatum)
ATGCTGGAGACAATGGGGTGGATCGTGAATGCAGTAGGTGTGGCCGTGGT
GGGAATGGTAGCAGTCAACCTGAACTTCTGGCTACCTAAACATATCCCTG
CACAGCTGGTACACATAGCAGGTAGGTGTAACAGTCACAGCCTCTAGTGG
TAGAGGTTCGTTAGATGTGAAAGAAATGACTGGAAGAATTGGCAGAATAT
TGTCAGCTAACTTCACTCAGTACATGCTCAGGTAGCACAATGTTATTGAT
ATAACAGTTATGTCAACATAGGATAAAGGGGTCAGTGGAACTGACCTTTT
GTTCCCATTGTCAGGAGCAATTTCCTGATTAAACAAAGGTAATGATGGTA
AACCCTAAGTCTAAAGAGGTATTCTGGTCATTCATGTTTTTTTCATCATG
CATTGTTGCTTAAAAAAAGATGGATCTATGGTAGCTACATAGCTACTGTG
ACTTCAGACTGCATGTTTAGTCTGTGGCGCCCTTTACGGTAGTGTGTGGT
TTGAAGTAAGAAATTCAACTGACTTGTGTCTGAGAGGTTGACACAAGGTT
TAGGAGTGTAAATGAGTTAAGTCTATCCACAATCCCACAGGATACAGCTA
GGAGGATTCTGGGTTTGCCGGTTGCTTAGAGTTTAATCCAGCATATAGGT
CTCTATGGTAATACTCAGCACTCAACTTGAAATGTCTGCTGCTGGGCTGG
GTGCCATTGACAATCAATTTTGACTGTTGAGTGTCGTAAAAATGGACCTG
GGGACTGCAAAAAAGTGGTAGATAGTTGGTTACTTAGCAGAGGGTCTTGA
TTATGAAGAATTGGACAGGATTGTTTCAATGTGACTGCAGGTGGTTGCCT
GTGCCAGGTGTTTGCCCAAGCAAGGTTTGACTGTATATAGGATCAGAAGA
GACACATACAGATGTACTGTCACAATATTACAAAGAAAGACATTCCAGCT
ATACCCTAATGCAGCTTCAGGAATTTAGTTGAGGGAAACTGGCATACAAA
AGAGGGCTGATTTGTTATCCGCAAAAGCAATGCTATTAAAGGACCAGTGT
GATTTGCGTTATCTATATTTTCTGTATAAATGTTTGGAACACTTTCCTTA
CCCGTTTCTTATTACCTTCATGTTTTCAGCATTAGAATTGAGCAGCCCAT
TACAAATTTGAAGGTGCGGAAACATTTTTCAATCTTTCCATATTCCCCAG
TAAAATTTGTTTGTTCAACACTTCTTTTCCCTGTTGCTTCAGATGCTGCT
CTAGAAGAGCTGGACAGTAACAAGAGAAAGTTGCAGGCAAAAGAACTGTG
GAAAAACCATGGTGCCGTCATCATGGCCGTGCGCAGACCCGGATGACAGC
TGTGCAGAGAGGTGAGTCAAACAAACAAACAGTTTTCAACAATCTTTAAC
CTCCTCCCTGCTACCTCAGTCTGTACTGCATGCAAATTTGGTACCCAAAG
GCCACTTCAGTAGGGAGGAAGTTGATATAAAAGATAAATCTCTTCTGCCC
ATTAACGAAAACAGATGTTGAGATAAAGTTACCACTGCCATAGGGTTTAC
TCAAGTTTAGGGATATGTGTAAAGAACTGTATCAAACTCTTTGGATGCTA
TCTGAAACGTCTGACTGTTTCAAAATCTTATCCAGTTGCTTGAGTAATTA
TTTTTGGCGTATCTTATTACCTGGATGTCTAACCTTCATCAACATACCCA
ACTCTGTATTATTTAGCCAGTATGACATTAATCATCCTTTGTCATCGCAT
ACCAGCTTCACAGACAAACAGCAATGACTGGACACATCAAATCAAACAAC
CCCGGCACACCCAACCATTCCATATCTATTAGATTGCAATTGAAAATGCG
AAATGGCAGTTACTCAAGCAATAAAATAAAATTTCATCAAAATATAAAAT
TTTGAGACATACATTTCAGACAGCATCCGCCATGTTTCGTCAGTGACTAA
AGGGTAAAGAACTTCAGTTAAGAATATTTGATGGAGGTATGAGATTTTTG
ATGTCTTGTTGATTTTGCCCCATCTGCAGGAGGCCCTCGGGCTGTCCTCT
CTGAAGCCCCAGCTGGACCAGGCTGGTGTCCCTCTCTATGCTGTTGTCCA
TGAGAGAAGGGGAGTGCCAGAGTTCCAGCCGTACTTCCAGGGGAAGGTCT
TCCTGGACCTTGAGGTAAAACAGTTGTAATGGTATCTTCTTCCTGCACTT
GATCAGACTGTAATACAGTGATACTAAATACCTTAACTTAATTGAATATA
AAAGCAATGTGATATAGTTTGCATATTGTATGTCAAAAGCGGTGGAAGAC
GAAATACATTTTATCTCAAACTGCCCCTTCAATGATCAGAAAAGAAAAGA
GCTTTTTAAAGAAGCCACCAAAACTTACCACAATTTCCAAACGATTACTG
ACGAAAAGAAAACTAGAACCCTGTTAACCTCTCAAAACCCACTCATTACA
CTGTCTTCCACTGCTTCCAAAAAAGAAGTCAAACCCAAAAAGCGCAGATT
GTATTCCATAGTAGTTCTTTGAATAGCCATTTGTTCCACTTGTAAACATT
GTTAACTTGCACTATCTGTACAGTATACCCTTTCTATGCATTGTTTCATG
TTGTAATTAGCCCTTAGGCAAGAACTTGCAAATAAAACATTCTCATTAAT
AGAAATTTGTTTTCTAAAGAGACAGGTAATGAAATTTAATTTTTGGACCT
TTGAGCCCCAGATTCTTTTTGCTTTAGGAAACTTTCTGGTTTGTCTGGAG
TGATTCAAAAGCTCAGTTTTGTTGCCCGTCTCTTTTAGCTTTATCTTCTC
AATGATAAGACTGATGCATTACTGTTCTCTGTTGTCAATACAATGTTAAT
TTGTAGCTCTTCATATTTCCATGCACTGGAACCGTAAGTTTTTTTATTTG
TACTGCAGCTGTTTAAAAGTTGCTACTGGAAAAAGTCAAGGACTCCTTTT
GGTATGTACATCTATGAATCCTATAACTGTACAGCAATACTTTGTTTGAT
TCTTTCAGAGAAGATTCTACGGTCCCCATGAACGGTGGATGTCTCTCGCT
GGTCTCCTGAGGGTCAACTTCTGGCTCAACATCCGCCGAAGCATGGAGAA
GAAAGTCGAGGGGAACCGCGAAGGGGAGGGGCGGTTGCTAGGCGGAGTCT
TTGTCGTTGGGAGCGGTAACCAGGGCATCTTACTGCAGCACGCAGAGGAA
GAGTTTGGTCACCATGCCAACCTTACTGACGTCATGAACGCTGTGGAGAA
AATCCAGCACATCAGAGCCCAGAAAAGCAAAATTTAG Coding sequence (CDS) from alignment at Sc0000060:918603..921889+ >transcript:BL95559_evm1 ID=transcript:BL95559_evm1|Name=transcript:BL95559_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2484bp|location=Sequence derived from alignment at Sc0000060:918603..921889+ (Branchiostoma lanceolatum)
ATGCTGGAGACAATGGGGTGGATCGTGAATGCAGTAGGTGTGGCCGTGGT
GGGAATGGTAGCAGTCAACCTGAACTTCTGGCTACCTAAACATATCCCTG
CACAGCTGGTACACATAGCAGATGCTGCTCTAGAAGAGCTGGACAGTAAC
AAGAGAAAGTTGCAGGCAAAAGAACTGTGGAAAAACCATGGTGCCGTCAT
CATGGCCGAGGCCCTCGGGCTGTCCTCTCTGAAGCCCCAGCTGGACCAGG
CTGGTGTCCCTCTCTATGCTGTTGTCCATGAGAGAAGGGGAGTGCCAGAG
TTCCAGCCGTACTTCCAGGGGAAGGTCTTCCTGGACCTTGAGAGAAGATT
CTACGGTCCCCATGAACGGTGGATGTCTCTCGCTGGTCTCCTGAGGGTCA
ACTTCTGGCTCAACATCCGCCGAAGCATGGAGAAGAAAGTCGAGGGGAAC
CGCGAAGGGGAGGGGCGGTTGCTAGGCGGAGTCTTTGTCGTTGGGAGCGG
TAACCAGGGCATCTTACTGCAGCACGCAGAGGAAGAGTTTGGTCACCATG
CCAACCTTACTGACGTCATGAACGCTGTGGAGAAAATCCAGCACATCAGA
GCCCAGAAAAGCAAAATTTAGATGCTGGAGACAATGGGGTGGATCGTGAA
TGCAGTAGGTGTGGCCGTGGTGGGAATGGTAGCAGTCAACCTGAACTTCT
GGCTACCTAAACATATCCCTGCACAGCTGGTACACATAGCAGATGCTGCT
CTAGAAGAGCTGGACAGTAACAAGAGAAAGTTGCAGGCAAAAGAACTGTG
GAAAAACCATGGTGCCGTCATCATGGCCGAGGCCCTCGGGCTGTCCTCTC
TGAAGCCCCAGCTGGACCAGGCTGGTGTCCCTCTCTATGCTGTTGTCCAT
GAGAGAAGGGGAGTGCCAGAGTTCCAGCCGTACTTCCAGGGGAAGGTCTT
CCTGGACCTTGAGAGAAGATTCTACGGTCCCCATGAACGGTGGATGTCTC
TCGCTGGTCTCCTGAGGGTCAACTTCTGGCTCAACATCCGCCGAAGCATG
GAGAAGAAAGTCGAGGGGAACCGCGAAGGGGAGGGGCGGTTGCTAGGCGG
AGTCTTTGTCGTTGGGAGCGGTAACCAGGGCATCTTACTGCAGCACGCAG
AGGAAGAGTTTGGTCACCATGCCAACCTTACTGACGTCATGAACGCTGTG
GAGAAAATCCAGCACATCAGAGCCCAGAAAAGCAAAATTTAGATGCTGGA
GACAATGGGGTGGATCGTGAATGCAGTAGGTGTGGCCGTGGTGGGAATGG
TAGCAGTCAACCTGAACTTCTGGCTACCTAAACATATCCCTGCACAGCTG
GTACACATAGCAGATGCTGCTCTAGAAGAGCTGGACAGTAACAAGAGAAA
GTTGCAGGCAAAAGAACTGTGGAAAAACCATGGTGCCGTCATCATGGCCG
AGGCCCTCGGGCTGTCCTCTCTGAAGCCCCAGCTGGACCAGGCTGGTGTC
CCTCTCTATGCTGTTGTCCATGAGAGAAGGGGAGTGCCAGAGTTCCAGCC
GTACTTCCAGGGGAAGGTCTTCCTGGACCTTGAGAGAAGATTCTACGGTC
CCCATGAACGGTGGATGTCTCTCGCTGGTCTCCTGAGGGTCAACTTCTGG
CTCAACATCCGCCGAAGCATGGAGAAGAAAGTCGAGGGGAACCGCGAAGG
GGAGGGGCGGTTGCTAGGCGGAGTCTTTGTCGTTGGGAGCGGTAACCAGG
GCATCTTACTGCAGCACGCAGAGGAAGAGTTTGGTCACCATGCCAACCTT
ACTGACGTCATGAACGCTGTGGAGAAAATCCAGCACATCAGAGCCCAGAA
AAGCAAAATTTAGATGCTGGAGACAATGGGGTGGATCGTGAATGCAGTAG
GTGTGGCCGTGGTGGGAATGGTAGCAGTCAACCTGAACTTCTGGCTACCT
AAACATATCCCTGCACAGCTGGTACACATAGCAGATGCTGCTCTAGAAGA
GCTGGACAGTAACAAGAGAAAGTTGCAGGCAAAAGAACTGTGGAAAAACC
ATGGTGCCGTCATCATGGCCGAGGCCCTCGGGCTGTCCTCTCTGAAGCCC
CAGCTGGACCAGGCTGGTGTCCCTCTCTATGCTGTTGTCCATGAGAGAAG
GGGAGTGCCAGAGTTCCAGCCGTACTTCCAGGGGAAGGTCTTCCTGGACC
TTGAGAGAAGATTCTACGGTCCCCATGAACGGTGGATGTCTCTCGCTGGT
CTCCTGAGGGTCAACTTCTGGCTCAACATCCGCCGAAGCATGGAGAAGAA
AGTCGAGGGGAACCGCGAAGGGGAGGGGCGGTTGCTAGGCGGAGTCTTTG
TCGTTGGGAGCGGTAACCAGGGCATCTTACTGCAGCACGCAGAGGAAGAG
TTTGGTCACCATGCCAACCTTACTGACGTCATGAACGCTGTGGAGAAAAT
CCAGCACATCAGAGCCCAGAAAAGCAAAATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000060 | genome | Sc0000060:918603..921889 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95559_evm1 |
| Biotype | protein_coding |
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