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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95551_evm3 >transcript:BL95551_evm3-protein ID=transcript:BL95551_evm3-protein|Name=transcript:BL95551_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=162bp
MAFSQVIALAFLVAGCQAKSLVARQGLLDPYGCLMACPLEFKPVCGSDGI
TYSSPCHLDEAACQLAEHLSNRPNYEPLTMVDEAPCGRQNHKRQFDSDCP
MFCPEYYSPVCGSNGQTYSNICFLNSAACVSAANDANAKPIVLWHPGGCN
ADGSVMEFPLLS Run BLAST on NCBI mRNA from alignment at Sc0000058:1276942..1280928- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95551_evm3 ID=transcript:BL95551_evm3|Name=transcript:BL95551_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=3987bp|location=Sequence derived from alignment at Sc0000058:1276942..1280928- (Branchiostoma lanceolatum)
ATGGCGTTCTCACAGGTGATAGCTCTTGCCTTTCTGGTGGCAGGTAGGTC
AAATGCTTTTTTTTTTACATCAAAATTGCTTTAGAATTCCGTATATGTAT
AATGGTAATTGCATGGTCTTCTTTTACATTTAATAAGATAGTCCCCAAAA
GATTAGAATTTTTGTCTCGTGTCTTCGTAATCTTCTCTCCTATTTGATAT
GATATCAACCATATGGTGGACAATTTCGTGGCCAAATATAGGGATAGCAA
AATATAGGGTTAAAGTGTCATCCGATAAAAGTGGGTAAAAGTATAGCTTA
CAGTCTGCAACTACCATCGAATTTCATCAAGAATTTCGAAGCAGATGTTG
GGGTGAAAGATCGTTACTTTGCCTGACTACCGTGCTTTTCTGACTGCTAC
TTTGAAGGTACCGACTGCCCGCAGATGCTGGGAGGGGTCAAAGAAGCCAT
GCATGCGGTTTAAACATAGCCTCTACCAGGCTCCACAGGTGGCTGGAAAA
ATAGTAGAAATTCGCCAAATAGACAGATAACATGCCAGGAGAGTTAGCTG
GCAAGGGAGTACAGTTTGCGACCTAGGGAGCCTGTAGGGAGTCGGCTTCT
TCAAATGATATGAAAGTAATCCAGTCATTATTCATGCAAAGGAACCGTAC
TCCCTGGCCAGCTAACTCCTCTGGCTCGTTATCTGTCTATTTGGTGAATT
TGTACTATTTTTCCAGCGACCTGTGGAGCTTGGTAGAGGCTAGTTTAAAA
ACACTTCACACCCTCAACAACTTTTTTCATACATTTTTATTCAACCGTAC
ATTGATACATAGCATATTTTACATATTTGCGAGTTCACAAATATACAAAA
TTACAAATTGTTACTGGGGCAATGCTCACTGACTTTTTTTGGCTAGGCAC
CCCAACCATAGATTGGATTCTCCGTGCATACGACTTTCATATCTTAAAGT
GAAAAAAATTCACAACAGACACACAAAAATAAAGTACAGTTGTTATTGAA
GATTTCTATTGATTTATTGGTCAGAAATTACCCGTGCAATTGCAGCCAGT
GCTGAATTGCTGCAGGGTTTACAATCATATAATACAGAACAGATACATTT
GCTCCACACTTGCACTTTGAACTGTCGCAAGGGTCTGGGCGGCTGCCATT
CGGCGCAGGCAGGTGACCTCAATACGACCTTCCCCAACCGAAGTCAGGTA
TCTATTCACACCTGGGTGGAGTGAGGAAAGTCGTGTAAAGTGCATTTCCC
AAGGGTACAACATCGGGGCATATCGGGGTTTCGAACCCTGGACCTCTCGG
TTCTGGGCGAAACACTTTACCGATTGCGCCACACGATGCCACTATTACCA
CAGATAAGGTAAACACAGCGTAATTTGTATCCAGGCTGCCAGGCCAAGTC
GCTGGTTGCCCGGCAGGGGTTGTTGGATCCGTACGGCTGTCTGATGGCCT
GTCCGCTGGAGTTTAAACCAGTCTGCGGATCGGATGGAATCACATACAGC
AGTCCCTGCCACCTGGACGAAGCCGCCTGCCAACTGGCCGAACAGTATGA
TATATTTTCCTTTTTATTCAACAGTTTTCATGTTTCTGTCTTTTTTGCGT
GTTTATTTATCTATTTGTTTGCCAGATCGAACCATATGTATACACGAGTT
GACCTGTTCAGTTTATGGTGTGCACGCAACATTATGTCCAAATATAGTAT
AGTGACCTGCGTAGTGACATTGCGCAAAACGCTACTCCTCGAACTTGGGG
CAAAATCAAAAAAGGGGAGGGGAGCAATGGATTGAAGTAAGAGAACCACT
AAATAAAGACGTCGACTCTGCGAAGCTTGGTATCACGTTTTAAGTCCATC
CATAAAATGGCTGTTTGTTTGTTTGTTTGTTGGTTTGTTTGTTCGTTTGA
ATAAAAAAGACTCTTTTTACACAACCAAGAGATTTAATCCACCGACGTTT
CGGTGACCATCTGTTACCTTCTTCAATGCAATTCTGACTGGTTCACATAG
CAACGCAGCACAGGTGTTGCTGCTTATACATAATGAGATGCATTCCCAAA
CGCAAATTATTCACATATGTACAATCACAGGGGATAGCATCACTATGTGT
AAGAAGAGTTATTTTTTATTCAGTGACTTACCAACCTGATGAAACTATTC
GCGGATGTCTGTTTGGTTGTTTTTTGTTTGTTTGTTTGAACCCATATTTA
ATATTCTCAAGAAGTTTAAGTTGGCCTACAGGCCGCTTTCATAACGGCTT
TCATGAAGGAAAAGGTAAGGGTCAGACAAAATGTAACAGTACGGATTACA
TCATTCATTTACAACTTCGTTATGTTGCTAGCCTCTCTAACCGGCCTAAC
TATGAGCCCCTGACGATGGTTGACGAGGCACCGTGCGGAAGACAGAATCA
CAAGCGGCAGTTCGACTCTGACTGCCCGATGTTCTGTCCGGAGTACTACT
CCCCTGTATGCGGCAGTAACGGGCAGACCTACAGCAACATCTGTTTCCTG
AACAGCGCCGCCTGTGTGTCTGCGTAAGTTGGACNACGAGTTGACCTGTT
CAGTTTATGGTGTGCACGCAACATTATGTCCAAATATAGTATAGTGACCT
GCGTAGTGACATTGCGCAAAACGCTACTCCTCGAACTTGGGGCAAAATCA
AAAAAGGGGAGGGGAGCAATGGATTGAAGTAAGAGAACCACTAAATAAAG
ACGTCGACTCTGCGAAGCTTGGTATCACGTTTTAAGTCCATCCATAAAAT
GGCTGTTTGTTTGTTTGTTTGTTGGTTTGTTTGTTCGTTTGAATAAAAAA
GACTCTTTTTACACAACCAAGAGATTTAATCCACCGACGTTTCGGTGACC
ATCTGTTACCTTCTTCAATGCAATTCTGACTGGTTCACATAGCAACGCAG
CACAGGTGTTGCTGCTTATACATAATGAGATGCATTCCCAAACGCAAATT
ATTCACATATGTACAATCACAGGGGATAGCATCACTATGTGTAAGAAGAG
TTATTTTTTATTCAGTGACTTACCAACCTGATGAAACTATTCGCGGATGT
CTGTTTGGTTGTTTTTTGTTTGTTTGTTTGAACCCATATTTAATATTCTC
AAGAAGTTTAAGTTGGCCTACAGGCCGCTTTCATAACGGCTTTCATGAAG
GAAAAGGTAAGGGTCAGACAAAATGTAACAGTACGGATTACATCATTCAT
TTACAACTTCGTTATGTTGCTAGCCTCTCTAACCGGCCTAACTATGAGCC
CCTGACGATGGTTGACGAGGCACCGTGCGGAAGACAGAATCACAAGCGGC
AGTTCGACTCTGACTGCCCGATGTTCTGTCCGGAGTACTACTCCCCTGTA
TGCGGCAGTAACGGGCAGACCTACAGCAACATCTGTTTCCTGAACAGCGC
CGCCTGTGTGTCTGCGTAAGTTGGACTTCTTGAATACACATATTTTTCAC
CTTTTTCGCATATTTTTCACATATTTTTCACATATTGTTCAAATATTTTT
CACATATTTTTCATATATTTTTCATATATTTTTAACATATTTTTCATATA
TTTTTCATATATTTTTCATATATTTTTCATATATTTTTCATGCATTTTTC
ACATATTATTCGTATTTTGCACCTTCAATATATCCATAAATCTATTTCAA
ATAGAGAACATCTGGATAGCCTTTTCAGCATTAAAACATTTAAAAGTAGT
GGTCATTATACAGTTATGCCCGTTATTGAAAATTAGGGCATCTTCTTCAA
AATCTACATGGATATTCCTAATCCCTGGTATTCATACGGCCTATAAACTT
AGATTTTTATATCAAACATAACTCTTGATTCGTGTTTCGTTTATCTCTTT
GCTTATTCATCTAGTTATTTATTTATTTATTTGTTGATTTCAGCGCCAAC
GATGCCAACGCAAAGCCCATCGTCCTGTGGCATCCCGGCGGCTGCAACGC
TGACGGCAGCGTGATGGAATTCCCGCTGTTATCCTGA Coding sequence (CDS) from alignment at Sc0000058:1276942..1280928- >transcript:BL95551_evm3 ID=transcript:BL95551_evm3|Name=transcript:BL95551_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=1956bp|location=Sequence derived from alignment at Sc0000058:1276942..1280928- (Branchiostoma lanceolatum)
ATGGCGTTCTCACAGGTGATAGCTCTTGCCTTTCTGGTGGCAGGCTGCCA
GGCCAAGTCGCTGGTTGCCCGGCAGGGGTTGTTGGATCCGTACGGCTGTC
TGATGGCCTGTCCGCTGGAGTTTAAACCAGTCTGCGGATCGGATGGAATC
ACATACAGCAGTCCCTGCCACCTGGACGAAGCCGCCTGCCAACTGGCCGA
ACACCTCTCTAACCGGCCTAACTATGAGCCCCTGACGATGGTTGACGAGG
CACCGTGCGGAAGACAGAATCACAAGCGGCAGTTCGACTCTGACTGCCCG
ATGTTCTGTCCGGAGTACTACTCCCCTGTATGCGGCAGTAACGGGCAGAC
CTACAGCAACATCTGTTTCCTGAACAGCGCCGCCTGTGTGTCTGCCGCCA
ACGATGCCAACGCAAAGCCCATCGTCCTGTGGCATCCCGGCGGCTGCAAC
GCTGACGGCAGCGTGATGGAATTCCCGCTGTTATCCTGAATGGCGTTCTC
ACAGGTGATAGCTCTTGCCTTTCTGGTGGCAGGCTGCCAGGCCAAGTCGC
TGGTTGCCCGGCAGGGGTTGTTGGATCCGTACGGCTGTCTGATGGCCTGT
CCGCTGGAGTTTAAACCAGTCTGCGGATCGGATGGAATCACATACAGCAG
TCCCTGCCACCTGGACGAAGCCGCCTGCCAACTGGCCGAACACCTCTCTA
ACCGGCCTAACTATGAGCCCCTGACGATGGTTGACGAGGCACCGTGCGGA
AGACAGAATCACAAGCGGCAGTTCGACTCTGACTGCCCGATGTTCTGTCC
GGAGTACTACTCCCCTGTATGCGGCAGTAACGGGCAGACCTACAGCAACA
TCTGTTTCCTGAACAGCGCCGCCTGTGTGTCTGCCGCCAACGATGCCAAC
GCAAAGCCCATCGTCCTGTGGCATCCCGGCGGCTGCAACGCTGACGGCAG
CGTGATGGAATTCCCGCTGTTATCCTGAATGGCGTTCTCACAGGTGATAG
CTCTTGCCTTTCTGGTGGCAGGCTGCCAGGCCAAGTCGCTGGTTGCCCGG
CAGGGGTTGTTGGATCCGTACGGCTGTCTGATGGCCTGTCCGCTGGAGTT
TAAACCAGTCTGCGGATCGGATGGAATCACATACAGCAGTCCCTGCCACC
TGGACGAAGCCGCCTGCCAACTGGCCGAACACCTCTCTAACCGGCCTAAC
TATGAGCCCCTGACGATGGTTGACGAGGCACCGTGCGGAAGACAGAATCA
CAAGCGGCAGTTCGACTCTGACTGCCCGATGTTCTGTCCGGAGTACTACT
CCCCTGTATGCGGCAGTAACGGGCAGACCTACAGCAACATCTGTTTCCTG
AACAGCGCCGCCTGTGTGTCTGCCGCCAACGATGCCAACGCAAAGCCCAT
CGTCCTGTGGCATCCCGGCGGCTGCAACGCTGACGGCAGCGTGATGGAAT
TCCCGCTGTTATCCTGAATGGCGTTCTCACAGGTGATAGCTCTTGCCTTT
CTGGTGGCAGGCTGCCAGGCCAAGTCGCTGGTTGCCCGGCAGGGGTTGTT
GGATCCGTACGGCTGTCTGATGGCCTGTCCGCTGGAGTTTAAACCAGTCT
GCGGATCGGATGGAATCACATACAGCAGTCCCTGCCACCTGGACGAAGCC
GCCTGCCAACTGGCCGAACACCTCTCTAACCGGCCTAACTATGAGCCCCT
GACGATGGTTGACGAGGCACCGTGCGGAAGACAGAATCACAAGCGGCAGT
TCGACTCTGACTGCCCGATGTTCTGTCCGGAGTACTACTCCCCTGTATGC
GGCAGTAACGGGCAGACCTACAGCAACATCTGTTTCCTGAACAGCGCCGC
CTGTGTGTCTGCCGCCAACGATGCCAACGCAAAGCCCATCGTCCTGTGGC
ATCCCGGCGGCTGCAACGCTGACGGCAGCGTGATGGAATTCCCGCTGTTA
TCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000058 | genome | Sc0000058:1276942..1280928 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95551_evm3 |
| Biotype | protein_coding |
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