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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95550_evm0 >transcript:BL95550_evm0-protein ID=transcript:BL95550_evm0-protein|Name=transcript:BL95550_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=173bp
MSTLQLLVVTMFVAGSQAKSLVVRQGFGNNCPQACFFIFAPVCGSNGVTY
GNQCELEVAACEQAALLSDQPNFKPLTMVHEAPCGTQNRKRQFDFDCPMY
CPEYYSPVCGSNGQTYSNICFLEMAACQAGVNRPNVKPITVAHQGGCNGE
GGFETRCYPPRKMVATERGFTCI Run BLAST on NCBI mRNA from alignment at Sc0000058:1281289..1284957- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95550_evm0 ID=transcript:BL95550_evm0|Name=transcript:BL95550_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3669bp|location=Sequence derived from alignment at Sc0000058:1281289..1284957- (Branchiostoma lanceolatum)
ATGTCTACCCTACAACTCTTGGTCGTCACCATGTTTGTGGCTGGTAAGAA
GCCTCGAATATTTTTGTACGGTTACATTTGTAAAACTATTTTTTAATGAA
TTTCTCTTAACGCCGCGGCCACATTCGTCATAGGTTTTCCTCGATTTTGA
TGTCGTATTTTTTAGCAGGCTGGGACAGAACCAGCCGCCGACAAGGATCG
TTATAACAGTCCTTTCTAGTTCTATGACAAGACAGTTGAATTTTGTTCGA
CATACGGACGACAATCCCAAGAATGCTCTCAGGATGCGACGATGATACGA
GGAATGTGTCCGAACCCTGTAACAAACAAGCGTGTCTACTTGGGTGGAAA
TGCCATACAAAAAGGGTATGCTATATAGATATACCATACCAATTAATCTA
AACCTCACCTTTATTATGTTGGAGGCATAAAGGAGTTAAGAACTTTGAAA
ATGTTGCTACAGCTGTTTCACTGTGTTTCAATGTCTTGTCGTGATACAAA
CCCCTCAGGCTCTCTTAGCGACATTTATTTTGTTCGTTCTGAATCAAAGT
CAACTCTCTTAATTCCTCGAGTTAACCTAATACCGCCATAATCTTAGAAA
AGTCTTGATGACAAAGACTTCTTCAAAATCTTCCATATGAAAGACAGAGA
ATATTGTACATTGCTATACAGTGAGCTTAACTGTGGTGTAAGTATGAGAG
GAGAAATGCAGAACCTGGTGTTTTTCTCACGCGTATCAGCTTTCAGGTCA
TAGGTTGTCCGCTCACATTGTTAGATGCACAAGTATTGTGTAATACCATT
TATTGATCGTTTGCTATACAAGGCGTTTTCACGTGGCGTGATCGGTGTTT
AAATATGTATCTAAACCGCCATATTGGGCTCCTTATCTAAATTACAGTGA
AATGTAGTTTAAAAGTTTTCACTGCAGTTAAAGGCCTTCTCAAACCTCGG
AATAAGTAATATTAGTTGTACAAATATCAGAGAAAAGAATGAAACAATAA
TATTCTAAATATAGTCAATGAAAACATTAATGTGTATTTTTAACTGCTAT
TCATTAAAATACCGATGAAATTTAATTGATATTAAAACTATTTTGAGTCA
TGTAAGAATTGAGATCACGCNAGAATCGAGATCACGCCAGATACAGATTA
AAAATTCATGTCTGCTTCTCTAATCAATGCCGCACAAAGTATTGTCACAA
ATGCACGGTGCCCCCCAAGAACAGTGCTATTTTTTGTGTATCTTGTACAT
TATATGCCCAGCAAACAAAAAAACAAGATACACAAAAATAGCCCTGTTCT
TGTGGGCCATCGTACAAATAATTCAACCTAACTATCAATTTTGCATGAAA
TTGTTTTTTTTCTTCTTTCTAATATAATTCCAGGATCCCAGGCTAAGTCA
CTGGTGGTCCGACAGGGCTTTGGGAACAACTGTCCGCAGGCGTGTTTCTT
CATCTTCGCGCCTGTCTGCGGGTCCAACGGGGTAACTTACGGCAACCAGT
GCGAACTGGAGGTGGCAGCCTGTGAGCAAGCCGCGCTGTAAGTCATGATC
AGGAAGCACAGCGATGTAACATAATAGACCCATTTCCAGTTACGGCGGCC
ATATTGAATTTTCCGGGGTCAGCTCGGGGTCATGCGCCAAAACGAGGCAT
GACAGGGTTGGGGCTCTTAGAAGCCAGAGGTATATATATGCCTTCTTTGT
TGCTTAATTTCTCCCCTCTTATGTGAAATACTGTGGTACATGTGCCCTTG
TTGTGTAGAAGATATTGTTGTGGTCATTTGGACAAAATAGTCTCCGTAAC
TGGAAATGGGTGAATCAATTCAAATATAGTCATTAAAATAAAATGAATAC
AATTAGTATGTACGTATTTCAAACGAATGTGAATTCGTACTAATCTTATT
GGAAAAAAGAACAGACGGTATAATGATTTCCTAAAATGTGAGTTTGTTCT
ACTTTTTTAAAAGTTTGAGTGTATCGTTAACGTTATAACATGTTTTGGCG
ACACCTCTGGGGCGAAAGGTCTAAATGCGACGATTGAATTGTAGATATAC
AAGGCTTCATTACATGCGTTTCTTGGTACTGAATGTGTGATCGTATTTGC
ATATAGTACATTTGCTGTTTTATGTCAAATCTATTGATCTTTCTTTACAA
TTTCAAATTCTCGTATTGTAAAGAAAACTGTATAAGTTGGGAATGAAAGA
TACTATTTTTACACAACCAAGAGATTTATTCCACCAACGTTTCGGTGACC
ATCTGTCACCTTCTTCAAGGCAATTCTGACTGGTTCACATAGTAATGCAG
CACAGGTGTTGCTGCTTATACATAATGAGATGCATTCCCAAACGCAATCT
ATTTACATATGTAAAATCACAGGAGATGACATCACTTTGCGGTCCCAAAC
GAACAGAAGTGTAACCCATACACAAGTAATGATCAAAAAACAACGGCGGA
ATAAATCTCTTGGTTCTGTAAAAAGATTATTTTTATATAGTCAGTGACTT
ACCAACCTGATGAAACTATTCACGGATGTATAACTTGTGTTTGGTACCTC
TAGTCTTTCTGACCAGCCGAACTTCAAACCCCTGACGATGGTTCACGAAG
CTCCGTGCGGTACCCAGAACCGTAAGCGGCAGTTCGACTTCGACTGCCCG
ATGTACTGTCCGGAGTACTACTCCCCGGTCTGCGGCAGTAACGGGCAGAC
CTACAGCAACATTTGCTTCCTGGAGATGGCTGCCTGTCAGGCTGGGTACG
TTCAAAATTCTGTTAATTTTACTTTTTAGTGGCTTCGTGTGGCGTAATGG
CTAGAACATTCGGCCGTCAAGCAATTACGCATGCAAGGGAACACGAGGTC
GAACCCGGCTTGTCTCCAGACATGTCTGGACATGCGCTCGGACGTTGTAC
GCTTGGGAAAGACACTTAACACAAATCTGCTCACTTCACTCAGGTGTAAA
TGAGTACCTAGCTTCGGTTAGAGACGTCCCTCGGATAGGACGTTAAATGG
AGGTCCCGTGTTTGGGGAGAGCCACACCCCACGCACGTTAAAGAACCAAC
CACACCTTTCGAAAAAGAGTAGGGGCATGCCCCGCCCAGTGTGCGATGGT
CCAAATCTTACAGTCTGGTCTGGGCTGACATCTTGAAAAGGTGATAGTTA
CCTGTTATGTCAATTCTTCCACAAATGTGATAAATCTAAATAAATGAATA
TATAAATGAAACTAAAAGTTTTCCTTGAAAAAGCCATATGTATTGTACCA
CGCTAAAGATAACCCGAACTCGATTTCTGACCCGTATTTCACCAGATTTT
CTTAATTCTTGACTCCTGTACCCGTTCACCGTTGCACCGTAAAAAAATGC
ATGCACCTGAGTTTGGCGATGACCCCATGACGTCAGCAGGCTGAGGTAGC
CCTTGCTGAAACGCGAAGCTGGGGAGGGGGGCGTGTTTACTTGCACACCT
GTTGCTTTACATCGCGATTGCATACACCTAAAAGTCGACTAATGATGATG
ATGATGACACATGTTTGTTTGTTTGTTTATTTTTAGCGTGAATCGTCCCA
ACGTCAAGCCAATCACCGTGGCGCACCAGGGCGGATGTAACGGCGAGGGC
GGCTTCGAAACTCGGTGTTACCCACCCCGCAAGATGGTCGCAACGGAGAG
GGGATTTACCTGCATTTAA Coding sequence (CDS) from alignment at Sc0000058:1281289..1284957- >transcript:BL95550_evm0 ID=transcript:BL95550_evm0|Name=transcript:BL95550_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2088bp|location=Sequence derived from alignment at Sc0000058:1281289..1284957- (Branchiostoma lanceolatum)
ATGTCTACCCTACAACTCTTGGTCGTCACCATGTTTGTGGCTGGATCCCA
GGCTAAGTCACTGGTGGTCCGACAGGGCTTTGGGAACAACTGTCCGCAGG
CGTGTTTCTTCATCTTCGCGCCTGTCTGCGGGTCCAACGGGGTAACTTAC
GGCAACCAGTGCGAACTGGAGGTGGCAGCCTGTGAGCAAGCCGCGCTTCT
TTCTGACCAGCCGAACTTCAAACCCCTGACGATGGTTCACGAAGCTCCGT
GCGGTACCCAGAACCGTAAGCGGCAGTTCGACTTCGACTGCCCGATGTAC
TGTCCGGAGTACTACTCCCCGGTCTGCGGCAGTAACGGGCAGACCTACAG
CAACATTTGCTTCCTGGAGATGGCTGCCTGTCAGGCTGGCGTGAATCGTC
CCAACGTCAAGCCAATCACCGTGGCGCACCAGGGCGGATGTAACGGCGAG
GGCGGCTTCGAAACTCGGTGTTACCCACCCCGCAAGATGGTCGCAACGGA
GAGGGGATTTACCTGCATTTAAATGTCTACCCTACAACTCTTGGTCGTCA
CCATGTTTGTGGCTGGATCCCAGGCTAAGTCACTGGTGGTCCGACAGGGC
TTTGGGAACAACTGTCCGCAGGCGTGTTTCTTCATCTTCGCGCCTGTCTG
CGGGTCCAACGGGGTAACTTACGGCAACCAGTGCGAACTGGAGGTGGCAG
CCTGTGAGCAAGCCGCGCTTCTTTCTGACCAGCCGAACTTCAAACCCCTG
ACGATGGTTCACGAAGCTCCGTGCGGTACCCAGAACCGTAAGCGGCAGTT
CGACTTCGACTGCCCGATGTACTGTCCGGAGTACTACTCCCCGGTCTGCG
GCAGTAACGGGCAGACCTACAGCAACATTTGCTTCCTGGAGATGGCTGCC
TGTCAGGCTGGCGTGAATCGTCCCAACGTCAAGCCAATCACCGTGGCGCA
CCAGGGCGGATGTAACGGCGAGGGCGGCTTCGAAACTCGGTGTTACCCAC
CCCGCAAGATGGTCGCAACGGAGAGGGGATTTACCTGCATTTAAATGTCT
ACCCTACAACTCTTGGTCGTCACCATGTTTGTGGCTGGATCCCAGGCTAA
GTCACTGGTGGTCCGACAGGGCTTTGGGAACAACTGTCCGCAGGCGTGTT
TCTTCATCTTCGCGCCTGTCTGCGGGTCCAACGGGGTAACTTACGGCAAC
CAGTGCGAACTGGAGGTGGCAGCCTGTGAGCAAGCCGCGCTTCTTTCTGA
CCAGCCGAACTTCAAACCCCTGACGATGGTTCACGAAGCTCCGTGCGGTA
CCCAGAACCGTAAGCGGCAGTTCGACTTCGACTGCCCGATGTACTGTCCG
GAGTACTACTCCCCGGTCTGCGGCAGTAACGGGCAGACCTACAGCAACAT
TTGCTTCCTGGAGATGGCTGCCTGTCAGGCTGGCGTGAATCGTCCCAACG
TCAAGCCAATCACCGTGGCGCACCAGGGCGGATGTAACGGCGAGGGCGGC
TTCGAAACTCGGTGTTACCCACCCCGCAAGATGGTCGCAACGGAGAGGGG
ATTTACCTGCATTTAAATGTCTACCCTACAACTCTTGGTCGTCACCATGT
TTGTGGCTGGATCCCAGGCTAAGTCACTGGTGGTCCGACAGGGCTTTGGG
AACAACTGTCCGCAGGCGTGTTTCTTCATCTTCGCGCCTGTCTGCGGGTC
CAACGGGGTAACTTACGGCAACCAGTGCGAACTGGAGGTGGCAGCCTGTG
AGCAAGCCGCGCTTCTTTCTGACCAGCCGAACTTCAAACCCCTGACGATG
GTTCACGAAGCTCCGTGCGGTACCCAGAACCGTAAGCGGCAGTTCGACTT
CGACTGCCCGATGTACTGTCCGGAGTACTACTCCCCGGTCTGCGGCAGTA
ACGGGCAGACCTACAGCAACATTTGCTTCCTGGAGATGGCTGCCTGTCAG
GCTGGCGTGAATCGTCCCAACGTCAAGCCAATCACCGTGGCGCACCAGGG
CGGATGTAACGGCGAGGGCGGCTTCGAAACTCGGTGTTACCCACCCCGCA
AGATGGTCGCAACGGAGAGGGGATTTACCTGCATTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000058 | genome | Sc0000058:1281289..1284957 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95550_evm0 |
| Biotype | protein_coding |
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