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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95549_evm0 >transcript:BL95549_evm0-protein ID=transcript:BL95549_evm0-protein|Name=transcript:BL95549_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=406bp
MRQNRPSVKYKRSTVFSLTKGVVESMKANMRFIFSMPFIDYHCGPNLWWR
QDPAQLAQLDTTGLPDVVPLQAADDDFCAAVQKCLPAEACGSHDGKHIIL
VDWDPYTLSPTNLKRLRAQHTIYILPXDDTDVIVFLALVGDQVVGLRASK
ITESGTAFIVKAARVAPDWRGQGIDRRLSLHQDQWMRQNRPSVKYKRSTA
FSLAQGVVESTKKKMRYIFSMPFIEYECGPSLWWRQDPAQLAQLDTTGLP
DVVPLQAADDDFCAAVQKWLPAEACGAHDGKPIILVDWDPYTLSPANLKL
LQAQYTMYMLKHEEETSLSFSNTYLSPSVRILTVEVYAKDFSTVLKHLLK
HLKDTCQTYTSDVIGMGVHVPQYDLDDVIHDFCRETLKMERVYTSKTQAL
AFESEM Run BLAST on NCBI mRNA from alignment at Sc0000058:1360660..1364550+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95549_evm0 ID=transcript:BL95549_evm0|Name=transcript:BL95549_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3891bp|location=Sequence derived from alignment at Sc0000058:1360660..1364550+ (Branchiostoma lanceolatum)
ATGCGTCAGAATCGTCCCTCGGTCAAGTACAAGCGATCCACGGTGTTTTC
ACTCACAAAAGGGGTAGTGGAGTCGATGAAGGCAAATATGCGATTTATCT
TTAGCATGGTGAGTACAGGAATTGTGGATTTCAAGGCAATGTTATGGACA
AAAAATATTAATTAAAAAAAATGCTGAAATCTTTATTGTAGTGACATTTG
CTAACACTGTCTAGCACATTTGTGTAATAACTTCATACTTTAAGCATATC
AAAACCGTACAAAAACATGGCGTACTTAGTTTCGCGAGCCTACAAAAAAA
AACGGCGACGATTTTCAATGAGTTCTCACATTACAACGAAGTCATATTTT
TGCATCATGGACGTCGCTATTGTGATAGTGTTGTTTGAACTTATCATGTA
GAAGATTGACTTTCAAAATCCATTTTTGGACCCTAATTTTGCTTGGGTTT
CTTTTCAGATGACTGTTCAAAAAGGACGTATGGTAATCGAAAAAAAGAAC
TGTGACAAATCTAACGTACATATTGTGTTTCTCTCAGCCCTTTATAGACT
ACCATTGCGGACCCAACCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCT
CAACTGGACACGACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGA
CGACGACTTCTGTGCGGCTGTACAGAAATGTCTGCCCGCCGAAGCTTGTG
GTAGCCACGACGGCAAACACATCATCCTTGTTGACTGGGACCCTTACACC
CTATCTCCAACCAACTTAAAGCGCCTACGAGCACAACACACTATCTACAT
GTTGAATCACGAAGAAAAAACAAGTCTAAGTTTTTCCAACACCTACCTTT
CGCCTTCAGTGAGAATCCTCGCCGTCCAAGTCTACGCCAAGGATTTCTCC
ACCGTCTTAAAACACCTCCTGAAACACCTGAAGGATACATGTCAAACCTA
CACTAGTGACGTCATCGGTATGCTTGTAAACGTTCCGCAATTTGAGCTAG
ATGACGTCATCCACGACTTTTGTAGAGAAACGTTAAAGATGGAATGCTTT
TATCCCTGCAAGACACAAGTGCTAGCCTTCGAATCTGAGATGTGATGTAA
TGTAACTGCACATAATACTATCCCATCAGGCTCGCTCCTGAGGTATCGCT
AAAAACCACGTCTCGATGAAGAGCCCATTACCTGTAGATTCCCTGTCCCC
TCCAGTAATGAGCGACCGTAGTGGCTTCCATTATAAATGCACCCCCAATT
TCTAGAGGATGGGATTGGACTTACCACTACTCTATATTAATGCTAGGGTC
ACATTTCCAAACCGTGGCCCGGCCAACCTGTTTGGGAGAACAAAAAATAC
AAATCTTGCAATTTGTGATATGTTATGTTCTACTTTAGTTATCTGCACTG
TGCTGATTTTCCATATTGCAATTAAGCTTTGCTTTCTTGAAAGCCATGGT
CATGTCGAATATATCACGTGCACGTTCTGTCGCATTCATAGATGAATAGA
AACTTAATTGACAACAGTACACGAGCTTGCATGTAGTGATCTAGCCTTGT
ATAAATAGTAGATATTGACACCAACGCAAACTCGAACACGTCTTATTATT
GTAATACACTTTCATGAAATAGAATAAGATAGAATAAAGATGATTAATTA
TTGTATTGTAAAGACCTGACACCATCCCTTGAACTCTTGAAAAGCGGCCA
AGGCCAAAGAATGTAACACGATATGTATGCGTTTTTCAACGTACAATGTA
TATATAAAGGTTAAAAAACATCTTTAGCAAAGCACATACAAAATTTGGGT
GAGATAATATGCAACTTATGACGCAACAGACTGAAAGCTATTTTGAATGA
CAGAAACACAATGGACAAAGTTATGGCAAAACGGACGAGTGAGAACGAAG
TTCGTGTGGCATCAAATGTCCGGCTTGTCTGGATTGTGAGGTGCCATGAG
AGTGCTAGTGTCTGGGACGTTTCAAAATGAATTTATTTTGTTAGCGTTAT
GGGTAAATACTTCCAACATAACGTTAATTACATTAATAAAATTTCCAGAA
ATCATGATGTATTGCAGATATATGACGTTATCTTTTCATGTGTATTGGGG
TCTTTCTAGTGCGTGTTCATTCTTTTTGGTAATATTTTCCCTTCTAACAT
CTGCTTGGAGATTGCCCANCGACGATACTGACGTCATTGTGTTCCTGGCG
TTGGTCGGTGACCAAGTGGTGAGAGCCCGTTTAATACAAATCTCCAGCAA
AACCATACATCTGCTTTGAGAGTTTTACCAGTCTCCAAGCAGATGTAGGG
AGGAAAAACCGTATCCTTTTGCGGTTACACTTGGATGTGTGTGTTTTTTT
CCAACATCTGTAGATCTAGTGCTAGTCAAAACGAGAATGGCTTGTCAGAA
AAATGGGTAGGCCAGAATTGATAACGTTTTTTCACCCCAACATCTGCTCG
GAGACAGGTGGAAATCTCGAAGCAGATGTGTGGTTTCGGCTTGATTTTTC
ACGTTTGGATTTACTTTACAGGTGGGACTGCGGGCATCCAAGATCACGGA
AAGCGGAACTGCATTTATCGTCAAAGCCGCTAGAGTCGCTCCTGACTGGA
GGGGACAGGGCATCGACAGAAGGTTATCTCTTCACCAAGACCAGTGGATG
CGTCAGAATCGTCCCTCGGTCAAGTACAAGCGATCCACGGCGTTTTCACT
CGCACAAGGCGTAGTGGAGTCGACAAAGAAAAAGATGCGATATATCTTTA
GTATGGTAAGTACAAGAAATGTGGACTTTCAGGTGACTGTTCAAAAACGA
CAATAATGCGACGCTGAGTTGCGCACAAGCATAAGTTTCGTTCGTTTCCA
CACAAAAAATTGTGACCATACTATAAATAGTACACGTATAAGGAAACTGC
AACATGAGCAAATATTGCAGTAAATTGCACTTAAAAAGAAATACCGGAAA
ATGGGTACTAGTGTGATACGATGCATCTTTTCCTGTCGTAAATTGTAATG
GCTTTGTTGTGCACTTACTCCTTTCATAAAATATATTTCAAACCTTGTGA
GAAGTTTTCAAAAGTCTTCAAAGAAATGTAAAAGAACAAAGATAAAGAAT
GTATTGTTTGTTATACCATATTCTGTTAGTTCAGTCATTTGTACAACCTT
CCTGACCGCTTAGATTTGATAACAAGGGCAACGTTGGGTTTTTTTGGTGG
GGGGGTATATTTTTCGCACCTCGCATCAACCTTGCAGTGCTAGTGGGATG
CCATCCATACTATCGAATCAGTATGGCCTAATGACAAAATAAACTTTAAC
AAATCTAGCGTATTTGTAACATGTTTCCTTCAGCCCTTTATAGAGTATGA
GTGCGGTCCCAGCCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAAC
TGGACACGACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGAC
GACTTCTGTGCGGCTGTGCAGAAATGGCTGCCCGCCGAAGCCTGTGGCGC
TCACGACGGCAAACCAATCATACTTGTTGACTGGGACCCTTACACCCTAT
CTCCGGCCAACTTAAAGCTCCTACAAGCGCAATACACTATGTACATGTTG
AAACATGAAGAAGAAACAAGTCTAAGTTTTTCCAACACCTACCTTTCGCC
TTCAGTGAGAATCCTCACCGTCGAAGTCTACGCCAAGGATTTCTCCACCG
TCTTAAAACACCTCCTGAAACACCTGAAGGATACATGTCAAACCTACACT
AGTGACGTCATCGGTATGGGTGTGCATGTTCCGCAGTATGACCTAGATGA
CGTCATCCACGACTTTTGTAGAGAAACGTTGAAAATGGAACGCGTCTATA
CCAGCAAGACACAGGCGCTAGCCTTCGAATCAGAAATGTGA Coding sequence (CDS) from alignment at Sc0000058:1360660..1364550+ >transcript:BL95549_evm0 ID=transcript:BL95549_evm0|Name=transcript:BL95549_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6105bp|location=Sequence derived from alignment at Sc0000058:1360660..1364550+ (Branchiostoma lanceolatum)
ATGCGTCAGAATCGTCCCTCGGTCAAGTACAAGCGATCCACGGTGTTTTC
ACTCACAAAAGGGGTAGTGGAGTCGATGAAGGCAAATATGCGATTTATCT
TTAGCATGCCCTTTATAGACTACCATTGCGGACCCAACCTCTGGTGGCGA
CAGGACCCTGCTCAGCTGGCTCAACTGGACACGACCGGCTTACCGGACGT
CGTGCCTCTACAGGCGGCAGACGACGACTTCTGTGCGGCTGTACAGAAAT
GTCTGCCCGCCGAAGCTTGTGGTAGCCACGACGGCAAACACATCATCCTT
GTTGACTGGGACCCTTACACCCTATCTCCAACCAACTTAAAGCGCCTACG
AGCACAACACACTATCTACATATTGCCCANCGACGATACTGACGTCATTG
TGTTCCTGGCGTTGGTCGGTGACCAAGTGGTGGGACTGCGGGCATCCAAG
ATCACGGAAAGCGGAACTGCATTTATCGTCAAAGCCGCTAGAGTCGCTCC
TGACTGGAGGGGACAGGGCATCGACAGAAGGTTATCTCTTCACCAAGACC
AGTGGATGCGTCAGAATCGTCCCTCGGTCAAGTACAAGCGATCCACGGCG
TTTTCACTCGCACAAGGCGTAGTGGAGTCGACAAAGAAAAAGATGCGATA
TATCTTTAGTATGCCCTTTATAGAGTATGAGTGCGGTCCCAGCCTCTGGT
GGCGACAGGACCCTGCTCAGCTGGCTCAACTGGACACGACCGGCTTACCG
GACGTCGTGCCTCTACAGGCGGCAGACGACGACTTCTGTGCGGCTGTGCA
GAAATGGCTGCCCGCCGAAGCCTGTGGCGCTCACGACGGCAAACCAATCA
TACTTGTTGACTGGGACCCTTACACCCTATCTCCGGCCAACTTAAAGCTC
CTACAAGCGCAATACACTATGTACATGTTGAAACATGAAGAAGAAACAAG
TCTAAGTTTTTCCAACACCTACCTTTCGCCTTCAGTGAGAATCCTCACCG
TCGAAGTCTACGCCAAGGATTTCTCCACCGTCTTAAAACACCTCCTGAAA
CACCTGAAGGATACATGTCAAACCTACACTAGTGACGTCATCGGTATGGG
TGTGCATGTTCCGCAGTATGACCTAGATGACGTCATCCACGACTTTTGTA
GAGAAACGTTGAAAATGGAACGCGTCTATACCAGCAAGACACAGGCGCTA
GCCTTCGAATCAGAAATGTGAATGCGTCAGAATCGTCCCTCGGTCAAGTA
CAAGCGATCCACGGTGTTTTCACTCACAAAAGGGGTAGTGGAGTCGATGA
AGGCAAATATGCGATTTATCTTTAGCATGCCCTTTATAGACTACCATTGC
GGACCCAACCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAACTGGA
CACGACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGACGACT
TCTGTGCGGCTGTACAGAAATGTCTGCCCGCCGAAGCTTGTGGTAGCCAC
GACGGCAAACACATCATCCTTGTTGACTGGGACCCTTACACCCTATCTCC
AACCAACTTAAAGCGCCTACGAGCACAACACACTATCTACATATTGCCCA
NCGACGATACTGACGTCATTGTGTTCCTGGCGTTGGTCGGTGACCAAGTG
GTGGGACTGCGGGCATCCAAGATCACGGAAAGCGGAACTGCATTTATCGT
CAAAGCCGCTAGAGTCGCTCCTGACTGGAGGGGACAGGGCATCGACAGAA
GGTTATCTCTTCACCAAGACCAGTGGATGCGTCAGAATCGTCCCTCGGTC
AAGTACAAGCGATCCACGGCGTTTTCACTCGCACAAGGCGTAGTGGAGTC
GACAAAGAAAAAGATGCGATATATCTTTAGTATGCCCTTTATAGAGTATG
AGTGCGGTCCCAGCCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAA
CTGGACACGACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGA
CGACTTCTGTGCGGCTGTGCAGAAATGGCTGCCCGCCGAAGCCTGTGGCG
CTCACGACGGCAAACCAATCATACTTGTTGACTGGGACCCTTACACCCTA
TCTCCGGCCAACTTAAAGCTCCTACAAGCGCAATACACTATGTACATGTT
GAAACATGAAGAAGAAACAAGTCTAAGTTTTTCCAACACCTACCTTTCGC
CTTCAGTGAGAATCCTCACCGTCGAAGTCTACGCCAAGGATTTCTCCACC
GTCTTAAAACACCTCCTGAAACACCTGAAGGATACATGTCAAACCTACAC
TAGTGACGTCATCGGTATGGGTGTGCATGTTCCGCAGTATGACCTAGATG
ACGTCATCCACGACTTTTGTAGAGAAACGTTGAAAATGGAACGCGTCTAT
ACCAGCAAGACACAGGCGCTAGCCTTCGAATCAGAAATGTGAATGCGTCA
GAATCGTCCCTCGGTCAAGTACAAGCGATCCACGGTGTTTTCACTCACAA
AAGGGGTAGTGGAGTCGATGAAGGCAAATATGCGATTTATCTTTAGCATG
CCCTTTATAGACTACCATTGCGGACCCAACCTCTGGTGGCGACAGGACCC
TGCTCAGCTGGCTCAACTGGACACGACCGGCTTACCGGACGTCGTGCCTC
TACAGGCGGCAGACGACGACTTCTGTGCGGCTGTACAGAAATGTCTGCCC
GCCGAAGCTTGTGGTAGCCACGACGGCAAACACATCATCCTTGTTGACTG
GGACCCTTACACCCTATCTCCAACCAACTTAAAGCGCCTACGAGCACAAC
ACACTATCTACATATTGCCCANCGACGATACTGACGTCATTGTGTTCCTG
GCGTTGGTCGGTGACCAAGTGGTGGGACTGCGGGCATCCAAGATCACGGA
AAGCGGAACTGCATTTATCGTCAAAGCCGCTAGAGTCGCTCCTGACTGGA
GGGGACAGGGCATCGACAGAAGGTTATCTCTTCACCAAGACCAGTGGATG
CGTCAGAATCGTCCCTCGGTCAAGTACAAGCGATCCACGGCGTTTTCACT
CGCACAAGGCGTAGTGGAGTCGACAAAGAAAAAGATGCGATATATCTTTA
GTATGCCCTTTATAGAGTATGAGTGCGGTCCCAGCCTCTGGTGGCGACAG
GACCCTGCTCAGCTGGCTCAACTGGACACGACCGGCTTACCGGACGTCGT
GCCTCTACAGGCGGCAGACGACGACTTCTGTGCGGCTGTGCAGAAATGGC
TGCCCGCCGAAGCCTGTGGCGCTCACGACGGCAAACCAATCATACTTGTT
GACTGGGACCCTTACACCCTATCTCCGGCCAACTTAAAGCTCCTACAAGC
GCAATACACTATGTACATGTTGAAACATGAAGAAGAAACAAGTCTAAGTT
TTTCCAACACCTACCTTTCGCCTTCAGTGAGAATCCTCACCGTCGAAGTC
TACGCCAAGGATTTCTCCACCGTCTTAAAACACCTCCTGAAACACCTGAA
GGATACATGTCAAACCTACACTAGTGACGTCATCGGTATGGGTGTGCATG
TTCCGCAGTATGACCTAGATGACGTCATCCACGACTTTTGTAGAGAAACG
TTGAAAATGGAACGCGTCTATACCAGCAAGACACAGGCGCTAGCCTTCGA
ATCAGAAATGTGAATGCGTCAGAATCGTCCCTCGGTCAAGTACAAGCGAT
CCACGGTGTTTTCACTCACAAAAGGGGTAGTGGAGTCGATGAAGGCAAAT
ATGCGATTTATCTTTAGCATGCCCTTTATAGACTACCATTGCGGACCCAA
CCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAACTGGACACGACCG
GCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGACGACTTCTGTGCG
GCTGTACAGAAATGTCTGCCCGCCGAAGCTTGTGGTAGCCACGACGGCAA
ACACATCATCCTTGTTGACTGGGACCCTTACACCCTATCTCCAACCAACT
TAAAGCGCCTACGAGCACAACACACTATCTACATATTGCCCANCGACGAT
ACTGACGTCATTGTGTTCCTGGCGTTGGTCGGTGACCAAGTGGTGGGACT
GCGGGCATCCAAGATCACGGAAAGCGGAACTGCATTTATCGTCAAAGCCG
CTAGAGTCGCTCCTGACTGGAGGGGACAGGGCATCGACAGAAGGTTATCT
CTTCACCAAGACCAGTGGATGCGTCAGAATCGTCCCTCGGTCAAGTACAA
GCGATCCACGGCGTTTTCACTCGCACAAGGCGTAGTGGAGTCGACAAAGA
AAAAGATGCGATATATCTTTAGTATGCCCTTTATAGAGTATGAGTGCGGT
CCCAGCCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAACTGGACAC
GACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGACGACTTCT
GTGCGGCTGTGCAGAAATGGCTGCCCGCCGAAGCCTGTGGCGCTCACGAC
GGCAAACCAATCATACTTGTTGACTGGGACCCTTACACCCTATCTCCGGC
CAACTTAAAGCTCCTACAAGCGCAATACACTATGTACATGTTGAAACATG
AAGAAGAAACAAGTCTAAGTTTTTCCAACACCTACCTTTCGCCTTCAGTG
AGAATCCTCACCGTCGAAGTCTACGCCAAGGATTTCTCCACCGTCTTAAA
ACACCTCCTGAAACACCTGAAGGATACATGTCAAACCTACACTAGTGACG
TCATCGGTATGGGTGTGCATGTTCCGCAGTATGACCTAGATGACGTCATC
CACGACTTTTGTAGAGAAACGTTGAAAATGGAACGCGTCTATACCAGCAA
GACACAGGCGCTAGCCTTCGAATCAGAAATGTGAATGCGTCAGAATCGTC
CCTCGGTCAAGTACAAGCGATCCACGGTGTTTTCACTCACAAAAGGGGTA
GTGGAGTCGATGAAGGCAAATATGCGATTTATCTTTAGCATGCCCTTTAT
AGACTACCATTGCGGACCCAACCTCTGGTGGCGACAGGACCCTGCTCAGC
TGGCTCAACTGGACACGACCGGCTTACCGGACGTCGTGCCTCTACAGGCG
GCAGACGACGACTTCTGTGCGGCTGTACAGAAATGTCTGCCCGCCGAAGC
TTGTGGTAGCCACGACGGCAAACACATCATCCTTGTTGACTGGGACCCTT
ACACCCTATCTCCAACCAACTTAAAGCGCCTACGAGCACAACACACTATC
TACATATTGCCCANCGACGATACTGACGTCATTGTGTTCCTGGCGTTGGT
CGGTGACCAAGTGGTGGGACTGCGGGCATCCAAGATCACGGAAAGCGGAA
CTGCATTTATCGTCAAAGCCGCTAGAGTCGCTCCTGACTGGAGGGGACAG
GGCATCGACAGAAGGTTATCTCTTCACCAAGACCAGTGGATGCGTCAGAA
TCGTCCCTCGGTCAAGTACAAGCGATCCACGGCGTTTTCACTCGCACAAG
GCGTAGTGGAGTCGACAAAGAAAAAGATGCGATATATCTTTAGTATGCCC
TTTATAGAGTATGAGTGCGGTCCCAGCCTCTGGTGGCGACAGGACCCTGC
TCAGCTGGCTCAACTGGACACGACCGGCTTACCGGACGTCGTGCCTCTAC
AGGCGGCAGACGACGACTTCTGTGCGGCTGTGCAGAAATGGCTGCCCGCC
GAAGCCTGTGGCGCTCACGACGGCAAACCAATCATACTTGTTGACTGGGA
CCCTTACACCCTATCTCCGGCCAACTTAAAGCTCCTACAAGCGCAATACA
CTATGTACATGTTGAAACATGAAGAAGAAACAAGTCTAAGTTTTTCCAAC
ACCTACCTTTCGCCTTCAGTGAGAATCCTCACCGTCGAAGTCTACGCCAA
GGATTTCTCCACCGTCTTAAAACACCTCCTGAAACACCTGAAGGATACAT
GTCAAACCTACACTAGTGACGTCATCGGTATGGGTGTGCATGTTCCGCAG
TATGACCTAGATGACGTCATCCACGACTTTTGTAGAGAAACGTTGAAAAT
GGAACGCGTCTATACCAGCAAGACACAGGCGCTAGCCTTCGAATCAGAAA
TGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000058 | genome | Sc0000058:1360660..1364550 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95549_evm0 |
| Biotype | protein_coding |
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