|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95548_evm1 >transcript:BL95548_evm1-protein ID=transcript:BL95548_evm1-protein|Name=transcript:BL95548_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=326bp
MADNGASGKLTFRLASHGDYDAVMRISEGIYGGTDYLPAKFHSWIDNSDV
TVFLATVGDQVVGLKASKVMESGTAFITKASRVAPNWTGQGIDRQLSLHL
DTWMRQNHPTVKYKRSVTMSDSPRAESLKRKMHFIFNLPLAYYQCGPNLW
WRQDPAQLAQLDTTGLPDVVPLQAADDDFCAAVQKWLPAEACGGHDGKPI
ILVDWDPYTLSPANLKRLQKQRALFTLKHNGESSLSIVASNPAPLGTQLC
IDIYARDFPTWKKHVLKHLHDASVRFKSDHICAKMFVGLPELELDSVHDF
CTDVLKMDKIKLSDTRMRADVFECEL Run BLAST on NCBI mRNA from alignment at Sc0000058:1369152..1373247+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95548_evm1 ID=transcript:BL95548_evm1|Name=transcript:BL95548_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4096bp|location=Sequence derived from alignment at Sc0000058:1369152..1373247+ (Branchiostoma lanceolatum)
ATGGCGGACAACGGTGCAAGTGGGAAGCTAACTTTTCGTCTGGCCTCTCA
CGGCGACTACGACGCCGTCATGCGGATCTCTGAGGGTATCTACGGTGGTA
CAGACTACCTCCCCGCCAAATTCCACTCCTGGATAGACAATTCTGACGTC
ACAGTTTTCCTTGCAACGGTTGGAGACCAGGTGGTGAGGTGCTAGTACAC
CCCGACCAATCGAATCACCTGAATCGCATTCAAACTCAGATTCGTATCAG
CCATTTTCCGACAAATCGCTTTCTAACTTGCGTTAACGACAACATCTGAC
CAAACAAACTCGCCAGTGAGATGGTGGAAAGTGTCAGTTTCCAAAAGACG
TTTTCAGATTGACAATTTTGGCACTTTGGAAGTGATTGAATCCGCCCGCG
ATTTAACTTCTAGTTTCTACTACTTTTCTCTAAACGTTAAATCGCGGGCG
GATTCAATTTACTTCCAAAGTGCCAAAATTGTCAATCTGAAAACGTCTTT
TGGAAGCTGGCACCTTCCACCATCTCACTGGTCAGTTTGTTTGGTCAGAT
GTAGTCGTTAACGCAAGTAAGAAAGCGATTTGTCGGGAAATGGCTGATAC
GAATCTGAGTTTCAATGCGATTCACGTGATTCGATTAGTTGAATGTGGCA
GACGACTAGTATAGCAGAGGGGGAGTGTTGAGGGTCAAAAGTCACCTGAC
GACCTTCATCATATGCGCAACGCGTCATTGACAAATTTGCATCTTAGACG
GAAAACAAATATATTTTCAATGTATTCCTGTTCCATAAGGTGTTGATATT
TTCAACTTGTTGTTTTTAGATCGTTCATTCAAATGTATTTTGTAGGCTAT
GCATATCAATCTCATTACCTTCGCCGAGAAGGTTATGTTTTCGTCAGCGT
TCGTGTATGTCCTTCCTTCTGTGTACACGATGAATCAAGAATGCCTTTAT
GGATTGTCTTCATACGTAGTAGGTGGGTTGGTCTTCTTGAGACCTCGAAA
TTAGATTTTGGGCCCCCTAGCGGCTTGTTTTCTGTGTACTAGTATTATGA
ACTTTATGACTTATGCCTTTCTCTACTCCTTCCATGATATGCGAGGCTTA
ATAACTCTTTTATTGAATTAAGTTATTTCATGTTTGTTATTTTCCTTTTT
ATAGGTGGGACTGAAAGCATCCAAGGTCATGGAAAGCGGAACTGCATTTA
TTACCAAAGCCTCTAGGGTCGCTCCTAACTGGACGGGACAGGGAATTGAC
CGGCAGTTATCTCTACACCTAGACACGTGGATGCGTCAGAATCATCCCAC
GGTCAAGTACAAGCGATCTGTGACTATGTCGGACAGTCCTAGGGCGGAAT
CCTTGAAAAGAAAAATGCACTTCATTTTCAACTTGGTAAGACATCTTTTG
CATATTGCTTCATGATCAGTAGACATTATAAAAGAAGTTTTATTGCAAGT
TCATGCCCGTGGGCTAATTGCAAATACATGGTTGAAACATAGAGAAAAAC
ATACATGTGTCAGTGAACTGTGACTGACTTTGTTGTATCAATAGGCTACT
AATACTAAATACGACTGTTGGCTTTATCTAAACAAGCTGGGTTTGACTTC
TTTTTTTGGAAGCAATGGAAGACGAAAAGTCCCACTTTTAAGTCAATTTT
GGCAAAGGTGGGAAGCAACTACTGTAAGTGCAGGAATGTTCGCGGGAATT
NGGAATGTTCGCTGGAATTTGATTTCGTCGCAGGGAGAAAATGGAGTGTT
CGTGGTGGTTTTGAGTTTTGAAACAATAGTAGTCGCGTTTGAAACAATAG
TAGCGCTACAGTCACATAGTGGAACGGCTCTTCGCGGTGGTTTTAAGTTC
GCAAAAACCGCGAACATTTCTGCATCTACAGTTATTCACATGGTGTTACC
GGGGGTTCACACTAGTGCTTATGTTCAAGTCCGTATGACTTGCGTATTGA
CATTTTGGGGCTTAGATTTTGCCGGGAAAAAGTTGTGTTAATTATGATGT
CCATGACCCAACGTTGTGCAGCCTGGTCATTGAACCGAAAAAAAAATAGC
CGCAAACTTTACCAAGGCCAAACAAGATTGGCAACATAAAAAGATGTTGC
CATGGCGACGGTCGTCTCTGCTAACGTTTTCGTTTTCAGCCCACATGCAA
ATAAGGACCTTGCATAAATCATATCAGTCGATCACCCTCTTTACCAAAAT
AACACAAGTTGTCCAATGTATGAAAATCTTGTTTCACAAAAAAAGATATC
GTACCATTTCTTCATAGATTATGTAAATGAGGCCCTCTATGCAAGATTTG
TGTCTAATAGTGGCCACATTTACTTAACTTCCAAATGGTGCAAAAATGAA
ATCCCCACCATTTGCCACTATGGATTTATAGTATTTTGTCATTAATCATG
CAAATTAAGTATCAATTTGCACAATTGATATCTATCGATATTTATCTCTT
TCTCAGTTACATATGTCATGTGTTTGAGAGTCCTATAATAGAATGCAGCT
GATTTATTAACTGTCCTCATTAATTATGCAAATCAGATATTGATTTGCAT
AATTGGCATATGATTATGTAAATCTTCACTTAAGCTATCTACACACCAAA
AAACATGATGATCCATCATCCCCTTCTTGCGTTATTCTCTTTCAAAGTTT
GAGTCAAAATCAGCTCCTGCAGTTCCAAAAAAAGCCACTAGGGGGTCCAA
ATCTACAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCTAGGGGGTCCAAATCTACAGGACATATTTTCCTAACAAAG
AGCTATCCACCACTTAAAAATCATGACTATAGCATGTTCAGAAGACGAGA
TTTGAAAAGTGAAAGTTCCCCTGCAGTACCATAGAAAGTCGCTAGGGGGC
CCAAAATCCAATCATTACAAGGTCTCCCACAGACCTACCCACCTACAAAA
TATGAAGACAATACATCCAGGCATTCTTGAGTTATCGTCCCATGGACTTT
CACATTCCTGTACAATTCCTAGAATTCTTGCAATCTGCACACAATATAGT
AAAAATTTGGCTCGCCCCTGAGGCGTCGCCAAAAATGGTAACGTAAGGCC
ATGTAGATTTGATTATATGGATGGCATCCTCTGGGAACCCCAAAACTGAT
GCGAGCGTGCAAATAAGAAAAGATTTAAACTAACGTGGTCAGGAAGGTTA
AACAAATGACTAAACACAGATCTATAGTATACCAAATTATGGATTCTTCA
TTTTTGGTCTTTCACGTCCTCTCCTTTGAGTTTGGCATTCTAGTTTGGCA
TCTGTTTTCCGAAATATCTTTTTGAAATTTACGGAATGTATTTGACCATT
TTGTAGCTGCTTTGCACGATTTACACTGCGGTAGAAAACTTTTTTTCCTT
GGAAATGGACGAAAATTGATGCGCGCGCGGATGTCACCCATATCATCAAA
TCAACACGGCCTAACTCATAATTCAATATAGTCACTTGTGTGACACCGCC
ACCCCCCTTACGTATATTTGTCCATCCAGCCCTTAGCATACTACCAGTGC
GGACCCAACCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAACTGGA
CACGACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGACGACT
TCTGTGCGGCTGTACAGAAATGGTTGCCCGCCGAAGCCTGTGGCGGTCAC
GACGGCAAACCCATCATTCTTGTCGACTGGGACCCGTACACCCTATCTCC
AGCAAACTTAAAACGTCTTCAGAAACAGAGGGCACTCTTTACACTGAAGC
ACAACGGAGAATCAAGCCTGAGTATCGTAGCCTCTAACCCAGCCCCTTTA
GGGACGCAGTTGTGTATAGATATTTACGCTAGGGATTTTCCTACTTGGAA
GAAACACGTGTTAAAGCACCTGCACGACGCAAGCGTTAGGTTCAAAAGTG
ACCACATTTGTGCTAAAATGTTTGTAGGTCTGCCTGAGTTGGAGCTGGAC
TCAGTCCACGACTTCTGTACTGATGTTCTAAAAATGGACAAGATTAAGCT
TAGCGACACCAGGATGCGAGCGGACGTGTTTGAGTGCGAATTATAA Coding sequence (CDS) from alignment at Sc0000058:1369152..1373247+ >transcript:BL95548_evm1 ID=transcript:BL95548_evm1|Name=transcript:BL95548_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2943bp|location=Sequence derived from alignment at Sc0000058:1369152..1373247+ (Branchiostoma lanceolatum)
ATGGCGGACAACGGTGCAAGTGGGAAGCTAACTTTTCGTCTGGCCTCTCA
CGGCGACTACGACGCCGTCATGCGGATCTCTGAGGGTATCTACGGTGGTA
CAGACTACCTCCCCGCCAAATTCCACTCCTGGATAGACAATTCTGACGTC
ACAGTTTTCCTTGCAACGGTTGGAGACCAGGTGGTGGGACTGAAAGCATC
CAAGGTCATGGAAAGCGGAACTGCATTTATTACCAAAGCCTCTAGGGTCG
CTCCTAACTGGACGGGACAGGGAATTGACCGGCAGTTATCTCTACACCTA
GACACGTGGATGCGTCAGAATCATCCCACGGTCAAGTACAAGCGATCTGT
GACTATGTCGGACAGTCCTAGGGCGGAATCCTTGAAAAGAAAAATGCACT
TCATTTTCAACTTGCCCTTAGCATACTACCAGTGCGGACCCAACCTCTGG
TGGCGACAGGACCCTGCTCAGCTGGCTCAACTGGACACGACCGGCTTACC
GGACGTCGTGCCTCTACAGGCGGCAGACGACGACTTCTGTGCGGCTGTAC
AGAAATGGTTGCCCGCCGAAGCCTGTGGCGGTCACGACGGCAAACCCATC
ATTCTTGTCGACTGGGACCCGTACACCCTATCTCCAGCAAACTTAAAACG
TCTTCAGAAACAGAGGGCACTCTTTACACTGAAGCACAACGGAGAATCAA
GCCTGAGTATCGTAGCCTCTAACCCAGCCCCTTTAGGGACGCAGTTGTGT
ATAGATATTTACGCTAGGGATTTTCCTACTTGGAAGAAACACGTGTTAAA
GCACCTGCACGACGCAAGCGTTAGGTTCAAAAGTGACCACATTTGTGCTA
AAATGTTTGTAGGTCTGCCTGAGTTGGAGCTGGACTCAGTCCACGACTTC
TGTACTGATGTTCTAAAAATGGACAAGATTAAGCTTAGCGACACCAGGAT
GCGAGCGGACGTGTTTGAGTGCGAATTATAAATGGCGGACAACGGTGCAA
GTGGGAAGCTAACTTTTCGTCTGGCCTCTCACGGCGACTACGACGCCGTC
ATGCGGATCTCTGAGGGTATCTACGGTGGTACAGACTACCTCCCCGCCAA
ATTCCACTCCTGGATAGACAATTCTGACGTCACAGTTTTCCTTGCAACGG
TTGGAGACCAGGTGGTGGGACTGAAAGCATCCAAGGTCATGGAAAGCGGA
ACTGCATTTATTACCAAAGCCTCTAGGGTCGCTCCTAACTGGACGGGACA
GGGAATTGACCGGCAGTTATCTCTACACCTAGACACGTGGATGCGTCAGA
ATCATCCCACGGTCAAGTACAAGCGATCTGTGACTATGTCGGACAGTCCT
AGGGCGGAATCCTTGAAAAGAAAAATGCACTTCATTTTCAACTTGCCCTT
AGCATACTACCAGTGCGGACCCAACCTCTGGTGGCGACAGGACCCTGCTC
AGCTGGCTCAACTGGACACGACCGGCTTACCGGACGTCGTGCCTCTACAG
GCGGCAGACGACGACTTCTGTGCGGCTGTACAGAAATGGTTGCCCGCCGA
AGCCTGTGGCGGTCACGACGGCAAACCCATCATTCTTGTCGACTGGGACC
CGTACACCCTATCTCCAGCAAACTTAAAACGTCTTCAGAAACAGAGGGCA
CTCTTTACACTGAAGCACAACGGAGAATCAAGCCTGAGTATCGTAGCCTC
TAACCCAGCCCCTTTAGGGACGCAGTTGTGTATAGATATTTACGCTAGGG
ATTTTCCTACTTGGAAGAAACACGTGTTAAAGCACCTGCACGACGCAAGC
GTTAGGTTCAAAAGTGACCACATTTGTGCTAAAATGTTTGTAGGTCTGCC
TGAGTTGGAGCTGGACTCAGTCCACGACTTCTGTACTGATGTTCTAAAAA
TGGACAAGATTAAGCTTAGCGACACCAGGATGCGAGCGGACGTGTTTGAG
TGCGAATTATAAATGGCGGACAACGGTGCAAGTGGGAAGCTAACTTTTCG
TCTGGCCTCTCACGGCGACTACGACGCCGTCATGCGGATCTCTGAGGGTA
TCTACGGTGGTACAGACTACCTCCCCGCCAAATTCCACTCCTGGATAGAC
AATTCTGACGTCACAGTTTTCCTTGCAACGGTTGGAGACCAGGTGGTGGG
ACTGAAAGCATCCAAGGTCATGGAAAGCGGAACTGCATTTATTACCAAAG
CCTCTAGGGTCGCTCCTAACTGGACGGGACAGGGAATTGACCGGCAGTTA
TCTCTACACCTAGACACGTGGATGCGTCAGAATCATCCCACGGTCAAGTA
CAAGCGATCTGTGACTATGTCGGACAGTCCTAGGGCGGAATCCTTGAAAA
GAAAAATGCACTTCATTTTCAACTTGCCCTTAGCATACTACCAGTGCGGA
CCCAACCTCTGGTGGCGACAGGACCCTGCTCAGCTGGCTCAACTGGACAC
GACCGGCTTACCGGACGTCGTGCCTCTACAGGCGGCAGACGACGACTTCT
GTGCGGCTGTACAGAAATGGTTGCCCGCCGAAGCCTGTGGCGGTCACGAC
GGCAAACCCATCATTCTTGTCGACTGGGACCCGTACACCCTATCTCCAGC
AAACTTAAAACGTCTTCAGAAACAGAGGGCACTCTTTACACTGAAGCACA
ACGGAGAATCAAGCCTGAGTATCGTAGCCTCTAACCCAGCCCCTTTAGGG
ACGCAGTTGTGTATAGATATTTACGCTAGGGATTTTCCTACTTGGAAGAA
ACACGTGTTAAAGCACCTGCACGACGCAAGCGTTAGGTTCAAAAGTGACC
ACATTTGTGCTAAAATGTTTGTAGGTCTGCCTGAGTTGGAGCTGGACTCA
GTCCACGACTTCTGTACTGATGTTCTAAAAATGGACAAGATTAAGCTTAG
CGACACCAGGATGCGAGCGGACGTGTTTGAGTGCGAATTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000058 | genome | Sc0000058:1369152..1373247 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95548_evm1 |
| Biotype | protein_coding |
|
