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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95533_evm1 >transcript:BL95533_evm1-protein ID=transcript:BL95533_evm1-protein|Name=transcript:BL95533_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=157bp
MESKYTGVFMDGVFALLCIFLIVGVAMNNRYLCMTWVIGAVVYLVMDLIL
CIAITVIMFVTPMAMDDFVINVTVAPNATPAPADEMIDFAFNMAIVVTIA
VVWVLFLVVASIDIYCILVVYSHIQNLRESDQADDQPSGPPPAYDPAAQA
YSLERYD Run BLAST on NCBI mRNA from alignment at Sc0000055:567045..570984+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95533_evm1 ID=transcript:BL95533_evm1|Name=transcript:BL95533_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3940bp|location=Sequence derived from alignment at Sc0000055:567045..570984+ (Branchiostoma lanceolatum)
ATGGAGTGTTCGCGGAGGTGTTGAGTTCGCGTTTGAAACAATAGTGGCGC
TACAGCCAGACAATGGAATTAAACGCCTTGTCGCAGTGGGTTTAATTTCA
CGGTAAAGAGTTCACCGCGAAAACAGCGAACATAAAACTACCGCGAACAT
TTCTGCATTTACAGTCTGTTGCTAATATGAGCACTTAATGGCGGACCGTA
GCGACTGGAGGAAGAGGGTTGACTTAGTCCGGGCAACCCGCCCGACATGA
TGGTGATGATGATGATGATGATGATATGTCTCTTTGTATTTTACAGCCAA
GTACACTGGGGTATTCATGGATGGGGTTTTTGCACTCTTGTGTATTTTTC
TCATCGTGGGCGTGGCGATGGTAAGAAATAAACATTCTTACAAGGCTAGA
GCACAAAGGCAAACAAATAAACAAACAAACAAACAAAACAAGACCCATGT
TGCTATAAAGCAGAACAATATTGTTTTGTATATATAGATATGACATATTT
GTTTGTAAAGATTGGACGAGGATATGAAATTGCTTTGGAACCTAGACACT
AGCCATGATGGACAGGTGAAAATTGTTTGGTTTGATTATTGTCCATATTT
GGAACATTGGACGGAACCTGCCCTTTAAAACTTCTAGAGCTCCATGAGAT
AAGATGAATAATGAAAAAAGGATCTTGTACGAAGGTTCCTTGTGATGCTA
AGTTGTAGAATGACAGCGATGACAATAATGATAACTTGCTCAACATATCG
TTCTCATTTAAATGTACACATTTTTAAACCTTCGTTACCGATTGAAATAA
GACGTCCCTGGCATTAGGATATGCCACATATAAGATGCCAAACTAGTTTT
TATGACGACTTAAAACTTTTCTAGCTTTTAAAATGGCAGTTTGGTACCTT
ATATGTGGCATATCTTAATGTCAGGAACGTCTTACTTCTAACGGTAACGG
AGATTACAAAATGTGTACATTTAAATGAGAACGAGCGTACAACGTATGGC
AATTTGTACAGCAGTTCTAGTGTACTCTAATAAAAGACTTCATAGTGATA
TGAAAATAACGTTTGTTTTTGTTGTTTAGAACAATAGATACCTGTGCATG
ACATGGGTGATTGGAGCTGTGGTGTACCTGGTGATGGATCTGATCCTGTG
CATTGCTATAACAGTGATCATGTTCGTAACTCCAATGGCCATGGTCAGTA
CTCAGTTTCATAACTGCAATAGTCACAAGTGATCCACATCTATATATGGC
ACTGTCAGATGTATATACAATGGCTATTGTTTTATTTCATTTTTTCATTA
TTTTCATTATTCTTATTTTTCATTTGTTTTTTTAAAGATTATTTTTTTCT
GAATAAAAAATAATTATTACAACATTACAAAAATTGTAATATCAGCTACG
TACGTGTGTGACTGTCAATTGGATATGCTACAGTTTGATGACGCCATGTA
ATATTTCAACTAGTGGCTAGATTTAAAAAAAAAACATGTACATGTTTGCA
AAGTTCTTGAAAGAACAAGTCTAGTAGAGAAGATGATGGCATTTACCAGA
AATTAAAACCGCAGATTCACTGTATGTCAAGAATCGAACGACGAATGAAC
ATGGAACTAGACGATTTAGCTCGTGAATAGAATCTATATTCCACCTCCTA
TCTTAGCTAGCTGTGCATCTATTCATTGTAATATGGAAGGCAGGATCTAA
ATAATTTTAGCTTTAGTGTCATGTGTGCATTTTCTTCACTATTGGAGTAG
TGAGAATCTGCTCGTATATCATAAGAGTAAAGAATAGATACGATGCACAG
ATTCTACGTTAAGTAATAGTTTAGAATACATGGGATACTGAATCTAAAGC
CCCCCTATCACTGGACCTGCGGCACGCTGGCGGCGTCGCTGCGGCCGATC
GAATTGACAAAGCACTCAACGAATTTCATCGACAAAAAACGAATCTTTTT
AATCTTTGTGTGTTTTGTTGTCTTTTTGGTCATATTTGTACGTTTTGAAT
GACATTCCCATTATAACGTCAAGGGTAACACAAATCCAGTTTAGGATGCA
GCGACGCCGCCAGCGTGCCGCGGGTCCAGTGAGAAGGGGGCTTGAACTAT
TGTTACGAATGCCATTGTAATTCTTGACAACAACCCTTCTTTGTGTCACC
AGGATGACTTCGTTATTAACGTCACTGTCGCTCCAAACGCCACACCAGCA
CCTGCTGATGAGATGATTGACTTTGCTTTTAACATGGCCATCGTGGTTAC
CATAGCGGTTGTCTGGGTGCTCTTCTTGGTGGTGGCTAGTATCGACGTAA
GCATACATGTAGTTTTCATGATCCACGTACAGCTTAGCTTTGTTCTTGTT
CCCCAAAATAATTTCATCAGGTTGGTGGCTTCTCACCGCTATAAGTAGCC
GATGTAGGCGGCGCTTTTGTGGCGAAAACGTAATCCCAAACGTGGCTGAG
CTTGTATCCCCCCCTCGTCTCGCAAAAGCGCCACCTACATCGGCTACTGT
ATAGCGGTGAGAAGCAGTACTCCAGTCAGAAGCTCTGAAGAAGGTGTCTG
AGAGAGACACCGAAACGTCAGCAGGTGAGATTACCTGGTTGTGTTAAAAG
AAACTCCTTTGTTCTTGTAGATTTATATCTAAACGACCCGTGCCACAAAG
TGTCGTCGGCTTGCCTCGTCGCTGATATGATTGACATATGATTAACACAC
CAGCTTCACAGGAGGCACGCGGCGCGACAGCAGCTGGGCATATATTAAAC
CGAAAGACCTATCACATCTAACCTACGCATATCTAACTGCGTGCGTTGTT
AAAAGCTATCTAAACACTGTATTTCCGTAGATTTACTGCATTCTGGTGGT
CTATTCCCACATCCAAAACCTACGAGAGAGCGACCAAGCAGACGACCAGC
CAAGCGGACCTCCTCCTGCGTACGACCCTGCAGCTCAGGCTTACAGCCTG
GAGGTGAGCATTCCGCACGGGTACAGCAAGAAAAAGTTGCTAGGGGGCCC
AAAATCTAAATATTTTGAGGTCTCACAAAGACCTATCGACCCATTAAGTA
TGAAGACAATTCATCCAGGCATTCTTGAGCTATTGTCCAGTGGACTGAAA
TTCCTGTGGACACAATTCTTGCAAACTGCACACAATACTATACCATTAGG
CTCGCCCCTGAGACGTAGCCAATAACTCGATTAAACGATGTCTATGTTAA
GCATTTATAACGAAATAAAACTATGTCATCGAGTACATCTCATAAACCTA
GGTAATCCGATGGAGGGGTGGTTGGATCACATGAGATGATTCTGTCTTGT
CTGGCCAAGGAGAGAAAATGCCAAACAGAAATGTCGGGCAACCATCTTGC
TCAGGGAACAACCTGCAAACGACGTTGAAATAGTCCCTACCAATTTTACA
TACTTAAGACCATCTTCTAAGTAATGAATTGTATTACCCAACCAACAGCC
AATTTGTTTTTGGACCCTAGGGGGCATTCACACTCCACTCAACAACCAAA
ATGAATTCACAGTGGCACCAAGCCCAGCAGCCGTCATTTTTAATTGACGG
TTTCTTCAGGCGCTAGCCTGGTAACCACCCAACGGACCAGCTTAGGATAG
TTTTACCGGCCCCAATCCTACCAAGCAACGGCCTTCTCCTATAATTCATC
TTTCAAGTCGGCCTTCAATTACTGCCGTCCCGTAACGTAACATGACCAAT
TAACGTCCGATTTATTCAAAACGTATTTATCCTAAAACCGCGCGGACAGA
GCCAAATTTCAAACCCATGGGCAGAAATATCAGCTCTTCTAAAAAGAAAA
TGCAAAGTCTGTAAGTTTTTCTCCGCCTGTTTAACGCCGTGCGAGCATGT
GTTTATACTGAGGTACATGATGAAGAATTGTGCTAGGGTAACCTATTATC
GTCCACTTCTGAATCTTTTCCCTTCTAGCGCTATGATTGA Coding sequence (CDS) from alignment at Sc0000055:567045..570984+ >transcript:BL95533_evm1 ID=transcript:BL95533_evm1|Name=transcript:BL95533_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2844bp|location=Sequence derived from alignment at Sc0000055:567045..570984+ (Branchiostoma lanceolatum)
ATGGAGTCCAAGTACACTGGGGTATTCATGGATGGGGTTTTTGCACTCTT
GTGTATTTTTCTCATCGTGGGCGTGGCGATGAACAATAGATACCTGTGCA
TGACATGGGTGATTGGAGCTGTGGTGTACCTGGTGATGGATCTGATCCTG
TGCATTGCTATAACAGTGATCATGTTCGTAACTCCAATGGCCATGGATGA
CTTCGTTATTAACGTCACTGTCGCTCCAAACGCCACACCAGCACCTGCTG
ATGAGATGATTGACTTTGCTTTTAACATGGCCATCGTGGTTACCATAGCG
GTTGTCTGGGTGCTCTTCTTGGTGGTGGCTAGTATCGACATTTACTGCAT
TCTGGTGGTCTATTCCCACATCCAAAACCTACGAGAGAGCGACCAAGCAG
ACGACCAGCCAAGCGGACCTCCTCCTGCGTACGACCCTGCAGCTCAGGCT
TACAGCCTGGAGCGCTATGATTGAATGGAGTCCAAGTACACTGGGGTATT
CATGGATGGGGTTTTTGCACTCTTGTGTATTTTTCTCATCGTGGGCGTGG
CGATGAACAATAGATACCTGTGCATGACATGGGTGATTGGAGCTGTGGTG
TACCTGGTGATGGATCTGATCCTGTGCATTGCTATAACAGTGATCATGTT
CGTAACTCCAATGGCCATGGATGACTTCGTTATTAACGTCACTGTCGCTC
CAAACGCCACACCAGCACCTGCTGATGAGATGATTGACTTTGCTTTTAAC
ATGGCCATCGTGGTTACCATAGCGGTTGTCTGGGTGCTCTTCTTGGTGGT
GGCTAGTATCGACATTTACTGCATTCTGGTGGTCTATTCCCACATCCAAA
ACCTACGAGAGAGCGACCAAGCAGACGACCAGCCAAGCGGACCTCCTCCT
GCGTACGACCCTGCAGCTCAGGCTTACAGCCTGGAGCGCTATGATTGAAT
GGAGTCCAAGTACACTGGGGTATTCATGGATGGGGTTTTTGCACTCTTGT
GTATTTTTCTCATCGTGGGCGTGGCGATGAACAATAGATACCTGTGCATG
ACATGGGTGATTGGAGCTGTGGTGTACCTGGTGATGGATCTGATCCTGTG
CATTGCTATAACAGTGATCATGTTCGTAACTCCAATGGCCATGGATGACT
TCGTTATTAACGTCACTGTCGCTCCAAACGCCACACCAGCACCTGCTGAT
GAGATGATTGACTTTGCTTTTAACATGGCCATCGTGGTTACCATAGCGGT
TGTCTGGGTGCTCTTCTTGGTGGTGGCTAGTATCGACATTTACTGCATTC
TGGTGGTCTATTCCCACATCCAAAACCTACGAGAGAGCGACCAAGCAGAC
GACCAGCCAAGCGGACCTCCTCCTGCGTACGACCCTGCAGCTCAGGCTTA
CAGCCTGGAGCGCTATGATTGAATGGAGTCCAAGTACACTGGGGTATTCA
TGGATGGGGTTTTTGCACTCTTGTGTATTTTTCTCATCGTGGGCGTGGCG
ATGAACAATAGATACCTGTGCATGACATGGGTGATTGGAGCTGTGGTGTA
CCTGGTGATGGATCTGATCCTGTGCATTGCTATAACAGTGATCATGTTCG
TAACTCCAATGGCCATGGATGACTTCGTTATTAACGTCACTGTCGCTCCA
AACGCCACACCAGCACCTGCTGATGAGATGATTGACTTTGCTTTTAACAT
GGCCATCGTGGTTACCATAGCGGTTGTCTGGGTGCTCTTCTTGGTGGTGG
CTAGTATCGACATTTACTGCATTCTGGTGGTCTATTCCCACATCCAAAAC
CTACGAGAGAGCGACCAAGCAGACGACCAGCCAAGCGGACCTCCTCCTGC
GTACGACCCTGCAGCTCAGGCTTACAGCCTGGAGCGCTATGATTGAATGG
AGTCCAAGTACACTGGGGTATTCATGGATGGGGTTTTTGCACTCTTGTGT
ATTTTTCTCATCGTGGGCGTGGCGATGAACAATAGATACCTGTGCATGAC
ATGGGTGATTGGAGCTGTGGTGTACCTGGTGATGGATCTGATCCTGTGCA
TTGCTATAACAGTGATCATGTTCGTAACTCCAATGGCCATGGATGACTTC
GTTATTAACGTCACTGTCGCTCCAAACGCCACACCAGCACCTGCTGATGA
GATGATTGACTTTGCTTTTAACATGGCCATCGTGGTTACCATAGCGGTTG
TCTGGGTGCTCTTCTTGGTGGTGGCTAGTATCGACATTTACTGCATTCTG
GTGGTCTATTCCCACATCCAAAACCTACGAGAGAGCGACCAAGCAGACGA
CCAGCCAAGCGGACCTCCTCCTGCGTACGACCCTGCAGCTCAGGCTTACA
GCCTGGAGCGCTATGATTGAATGGAGTCCAAGTACACTGGGGTATTCATG
GATGGGGTTTTTGCACTCTTGTGTATTTTTCTCATCGTGGGCGTGGCGAT
GAACAATAGATACCTGTGCATGACATGGGTGATTGGAGCTGTGGTGTACC
TGGTGATGGATCTGATCCTGTGCATTGCTATAACAGTGATCATGTTCGTA
ACTCCAATGGCCATGGATGACTTCGTTATTAACGTCACTGTCGCTCCAAA
CGCCACACCAGCACCTGCTGATGAGATGATTGACTTTGCTTTTAACATGG
CCATCGTGGTTACCATAGCGGTTGTCTGGGTGCTCTTCTTGGTGGTGGCT
AGTATCGACATTTACTGCATTCTGGTGGTCTATTCCCACATCCAAAACCT
ACGAGAGAGCGACCAAGCAGACGACCAGCCAAGCGGACCTCCTCCTGCGT
ACGACCCTGCAGCTCAGGCTTACAGCCTGGAGCGCTATGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:567045..570984 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95533_evm1 |
| Biotype | protein_coding |
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