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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95529_evm0 >transcript:BL95529_evm0-protein ID=transcript:BL95529_evm0-protein|Name=transcript:BL95529_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=399bp
MGVLGTVTWLTAASALGAAVFAAYVYSSLPPDVTEPRKVFIFKGLERTRH
FIAWTYEEMGFGIMRYLPLQRVSHPNLEVTDSSFDGVRVRVYKPKAQKTA
KGGKMAGLLWFHGGGWVIGSIDSCDALVGRIANQTGAVVVSVEYRLAPEH
NFPIPFEDCLTATQHFLQHASEYGVDPTRIGVAGDSAGGNLAAAVALRLK
KDDKKKFPPLKLQALVYPSLQTFDFQTPSYVRGRSFFVTLPSEVTIGLWI
RYLNNNMSLVDIFSNNGHTAALKKSRFASYVDRHFLDESVPRSTPDEDVS
IDLPDDIKDILNPYFSPLMAEDADLSGLPNTYVTVCGKDVLRDDGIMYAK
RLEMAGVQVQLVRYPSGFHGILTFASKPFYFKVGKQMEQDLTTFLRDHL Run BLAST on NCBI mRNA from alignment at Sc0000054:1778905..1781248- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95529_evm0 ID=transcript:BL95529_evm0|Name=transcript:BL95529_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2344bp|location=Sequence derived from alignment at Sc0000054:1778905..1781248- (Branchiostoma lanceolatum)
ATGGGAGTTCTCGGGACTGTGACATGGCTGACCGCCGCCAGTGCCCTGGG
CGCCGCGGTTTTTGCAGCTTACGTGTACTCGTCTCTACCTCCTGACGTCA
CAGAACCACGCAAGGTCTTCATCTTCAAGGGACTTGAGCGAACGCGTCAC
TTTATTGTAAGTTTATATTTCAACAATATTCGCTCGTTCAGACCCTTGTA
CTGGTGTATTGTGGAACATAGGGCAGCAGGTTTCCTTGCTGTTTCAGTAG
CATGGTATGAGGCTGGAGGCCTACCCGCCTTAGCCCGGGACCCCCCCCCC
CCTACTTTGCCCCTGACGTGGTCATCGGGGGGGGGACCCCTAAGCTGAAG
TATATATTTCAGGGAGGGTTGCTAGCCCTTTAACGTGCTCGAGGCACCTT
CTCGAACACGGGATCCGCATTTTTCGTCTCTTCCGAAAGACGGGTGCAGC
CCCAACCGAGGTGTCCTTCCGAGGATTGAACCGGAGTCTCCCAGTTAACA
ACTACTTTAAGCCAGGAGCTCAACTATGAGACTCCTACAGTGTGGATAAA
TAGACTGCAATTCTAGTAGCGTTAGCAACTTTCTAAAGTGGTTATTGTTA
GTCACAGAGGACAAAATAAAGTGTATGCAAGCAAAATTAAAGTCGTCGTA
TTCTCACGCACTTTGCTCAGACAATGCCGTTTAAATCAATGATTACAGTA
CCTATTCTGGTGTGATACCCTGCATGGATTGTCACAGGCATGGACATACG
AGGAGATGGGGTTTGGCATAATGAGATACCTGCCACTGCAACGGGTGTCG
CATCCTAACCTGGAAGTTACGGACTCGTCCTTCGATGGTGTCCGGGTTCG
AGTCTACAAACCAAAAGCTCAGAAAACGGCGAAAGGGGGCAAGATGGCTG
GTCTACTGTGGTTCCATGGAGGGGGATGGGTCATTGGATCAATCGGTACG
TTTGGGACATATTTTTCTTGTGTCACACGGCACCATGTATCGTATTTGAA
AATCACATTCGTCTAAAAGTTTCGTTTGAGTCTGTTAAAAGATTGAATAC
GTATCAACTATTGTATTGCAGTTGCTGAATTAAAATCAAGGAAAGCCACT
TACGAATCCGTCAAAAAAGGCTTTCTGTAAGCAAAACATGTTACATTCAT
ATTCCTTTTTCTTTTCAGATTCATGCGACGCTCTTGTCGGACGCATCGCA
AACCAAACGGGTGCTGTGGTGGTGTCAGTTGAGTAAGTATCAATGATTAG
CATGATATAGATATAAATATTAGTACATAGCATATTGCTGACTCATTTCC
ACTTGTCCTCTTTCTTTTATTTGCCGTAAATGATTTCACAACCAATAACA
AAACCTGCCAATATTTTTGCCCGGGTAATCCTTCTGTTTGTACTTCGGGA
TATTTGTGGTGAGTACAACTTAAGAACAGCCGTATGATTTATTATGACAT
TTGGTCTGTGGGAAGGTCAGAGTCAAGTTTGGGCCTCTAACGACTATCCT
AAGTACTGCAGCAGAACTTCCAGTTTTTTTAAACCTTTCCCCTGAACATG
CCATGGTCTCTTTTTGTTTCAGATATCGGCTGGCCCCTGAACACAACTTC
CCCATTCCGTTTGAAGACTGTCTAACGGCTACCCAACATTTCCTCCAACA
CGCCAGTGAGTACGGAGTCGACCCGACAAGAATCGGTGTGGCGGGAGACA
GCGCAGGGGGTAACCTGGCTGCCGCGGTCGCTCTGAGGCTGAAAAAGGAC
GACAAAAAGAAGTTCCCGCCCCTAAAACTCCAAGCCCTCGTATATCCCTC
TCTCCAAACGTTCGACTTTCAGACCCCGTCGTATGTCAGAGGACGCAGTT
TCTTCGTTACCCTCCCTTCTGAGGTGACGATTGGACTCTGGATAAGATAC
CTCAACAACAACATGTCCCTGGTCGACATATTTTCAAACAACGGCCACAC
GGCTGCGCTGAAGAAGTCGCGCTTTGCCTCTTACGTTGACCGACACTTTC
TCGACGAATCCGTACCAAGATCGACGCCTGATGAAGACGTCAGCATAGAT
CTACCAGACGACATTAAGGACATCCTGAATCCCTACTTTTCTCCACTGAT
GGCAGAAGACGCCGACTTGTCCGGACTGCCGAACACCTACGTCACTGTTT
GTGGGAAGGACGTACTGAGGGATGACGGGATCATGTACGCCAAGAGGCTG
GAAATGGCGGGAGTTCAGGTCCAACTGGTGCGCTACCCGTCAGGCTTCCA
CGGGATCTTGACCTTCGCATCGAAACCGTTTTACTTTAAGGTCGGAAAAC
AGATGGAACAGGACTTGACAACGTTCTTACGTGATCATCTGTAA Coding sequence (CDS) from alignment at Sc0000054:1778905..1781248- >transcript:BL95529_evm0 ID=transcript:BL95529_evm0|Name=transcript:BL95529_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4800bp|location=Sequence derived from alignment at Sc0000054:1778905..1781248- (Branchiostoma lanceolatum)
ATGGGAGTTCTCGGGACTGTGACATGGCTGACCGCCGCCAGTGCCCTGGG
CGCCGCGGTTTTTGCAGCTTACGTGTACTCGTCTCTACCTCCTGACGTCA
CAGAACCACGCAAGGTCTTCATCTTCAAGGGACTTGAGCGAACGCGTCAC
TTTATTGCATGGACATACGAGGAGATGGGGTTTGGCATAATGAGATACCT
GCCACTGCAACGGGTGTCGCATCCTAACCTGGAAGTTACGGACTCGTCCT
TCGATGGTGTCCGGGTTCGAGTCTACAAACCAAAAGCTCAGAAAACGGCG
AAAGGGGGCAAGATGGCTGGTCTACTGTGGTTCCATGGAGGGGGATGGGT
CATTGGATCAATCGATTCATGCGACGCTCTTGTCGGACGCATCGCAAACC
AAACGGGTGCTGTGGTGGTGTCAGTTGAATATCGGCTGGCCCCTGAACAC
AACTTCCCCATTCCGTTTGAAGACTGTCTAACGGCTACCCAACATTTCCT
CCAACACGCCAGTGAGTACGGAGTCGACCCGACAAGAATCGGTGTGGCGG
GAGACAGCGCAGGGGGTAACCTGGCTGCCGCGGTCGCTCTGAGGCTGAAA
AAGGACGACAAAAAGAAGTTCCCGCCCCTAAAACTCCAAGCCCTCGTATA
TCCCTCTCTCCAAACGTTCGACTTTCAGACCCCGTCGTATGTCAGAGGAC
GCAGTTTCTTCGTTACCCTCCCTTCTGAGGTGACGATTGGACTCTGGATA
AGATACCTCAACAACAACATGTCCCTGGTCGACATATTTTCAAACAACGG
CCACACGGCTGCGCTGAAGAAGTCGCGCTTTGCCTCTTACGTTGACCGAC
ACTTTCTCGACGAATCCGTACCAAGATCGACGCCTGATGAAGACGTCAGC
ATAGATCTACCAGACGACATTAAGGACATCCTGAATCCCTACTTTTCTCC
ACTGATGGCAGAAGACGCCGACTTGTCCGGACTGCCGAACACCTACGTCA
CTGTTTGTGGGAAGGACGTACTGAGGGATGACGGGATCATGTACGCCAAG
AGGCTGGAAATGGCGGGAGTTCAGGTCCAACTGGTGCGCTACCCGTCAGG
CTTCCACGGGATCTTGACCTTCGCATCGAAACCGTTTTACTTTAAGGTCG
GAAAACAGATGGAACAGGACTTGACAACGTTCTTACGTGATCATCTGTAA
ATGGGAGTTCTCGGGACTGTGACATGGCTGACCGCCGCCAGTGCCCTGGG
CGCCGCGGTTTTTGCAGCTTACGTGTACTCGTCTCTACCTCCTGACGTCA
CAGAACCACGCAAGGTCTTCATCTTCAAGGGACTTGAGCGAACGCGTCAC
TTTATTGCATGGACATACGAGGAGATGGGGTTTGGCATAATGAGATACCT
GCCACTGCAACGGGTGTCGCATCCTAACCTGGAAGTTACGGACTCGTCCT
TCGATGGTGTCCGGGTTCGAGTCTACAAACCAAAAGCTCAGAAAACGGCG
AAAGGGGGCAAGATGGCTGGTCTACTGTGGTTCCATGGAGGGGGATGGGT
CATTGGATCAATCGATTCATGCGACGCTCTTGTCGGACGCATCGCAAACC
AAACGGGTGCTGTGGTGGTGTCAGTTGAATATCGGCTGGCCCCTGAACAC
AACTTCCCCATTCCGTTTGAAGACTGTCTAACGGCTACCCAACATTTCCT
CCAACACGCCAGTGAGTACGGAGTCGACCCGACAAGAATCGGTGTGGCGG
GAGACAGCGCAGGGGGTAACCTGGCTGCCGCGGTCGCTCTGAGGCTGAAA
AAGGACGACAAAAAGAAGTTCCCGCCCCTAAAACTCCAAGCCCTCGTATA
TCCCTCTCTCCAAACGTTCGACTTTCAGACCCCGTCGTATGTCAGAGGAC
GCAGTTTCTTCGTTACCCTCCCTTCTGAGGTGACGATTGGACTCTGGATA
AGATACCTCAACAACAACATGTCCCTGGTCGACATATTTTCAAACAACGG
CCACACGGCTGCGCTGAAGAAGTCGCGCTTTGCCTCTTACGTTGACCGAC
ACTTTCTCGACGAATCCGTACCAAGATCGACGCCTGATGAAGACGTCAGC
ATAGATCTACCAGACGACATTAAGGACATCCTGAATCCCTACTTTTCTCC
ACTGATGGCAGAAGACGCCGACTTGTCCGGACTGCCGAACACCTACGTCA
CTGTTTGTGGGAAGGACGTACTGAGGGATGACGGGATCATGTACGCCAAG
AGGCTGGAAATGGCGGGAGTTCAGGTCCAACTGGTGCGCTACCCGTCAGG
CTTCCACGGGATCTTGACCTTCGCATCGAAACCGTTTTACTTTAAGGTCG
GAAAACAGATGGAACAGGACTTGACAACGTTCTTACGTGATCATCTGTAA
ATGGGAGTTCTCGGGACTGTGACATGGCTGACCGCCGCCAGTGCCCTGGG
CGCCGCGGTTTTTGCAGCTTACGTGTACTCGTCTCTACCTCCTGACGTCA
CAGAACCACGCAAGGTCTTCATCTTCAAGGGACTTGAGCGAACGCGTCAC
TTTATTGCATGGACATACGAGGAGATGGGGTTTGGCATAATGAGATACCT
GCCACTGCAACGGGTGTCGCATCCTAACCTGGAAGTTACGGACTCGTCCT
TCGATGGTGTCCGGGTTCGAGTCTACAAACCAAAAGCTCAGAAAACGGCG
AAAGGGGGCAAGATGGCTGGTCTACTGTGGTTCCATGGAGGGGGATGGGT
CATTGGATCAATCGATTCATGCGACGCTCTTGTCGGACGCATCGCAAACC
AAACGGGTGCTGTGGTGGTGTCAGTTGAATATCGGCTGGCCCCTGAACAC
AACTTCCCCATTCCGTTTGAAGACTGTCTAACGGCTACCCAACATTTCCT
CCAACACGCCAGTGAGTACGGAGTCGACCCGACAAGAATCGGTGTGGCGG
GAGACAGCGCAGGGGGTAACCTGGCTGCCGCGGTCGCTCTGAGGCTGAAA
AAGGACGACAAAAAGAAGTTCCCGCCCCTAAAACTCCAAGCCCTCGTATA
TCCCTCTCTCCAAACGTTCGACTTTCAGACCCCGTCGTATGTCAGAGGAC
GCAGTTTCTTCGTTACCCTCCCTTCTGAGGTGACGATTGGACTCTGGATA
AGATACCTCAACAACAACATGTCCCTGGTCGACATATTTTCAAACAACGG
CCACACGGCTGCGCTGAAGAAGTCGCGCTTTGCCTCTTACGTTGACCGAC
ACTTTCTCGACGAATCCGTACCAAGATCGACGCCTGATGAAGACGTCAGC
ATAGATCTACCAGACGACATTAAGGACATCCTGAATCCCTACTTTTCTCC
ACTGATGGCAGAAGACGCCGACTTGTCCGGACTGCCGAACACCTACGTCA
CTGTTTGTGGGAAGGACGTACTGAGGGATGACGGGATCATGTACGCCAAG
AGGCTGGAAATGGCGGGAGTTCAGGTCCAACTGGTGCGCTACCCGTCAGG
CTTCCACGGGATCTTGACCTTCGCATCGAAACCGTTTTACTTTAAGGTCG
GAAAACAGATGGAACAGGACTTGACAACGTTCTTACGTGATCATCTGTAA
ATGGGAGTTCTCGGGACTGTGACATGGCTGACCGCCGCCAGTGCCCTGGG
CGCCGCGGTTTTTGCAGCTTACGTGTACTCGTCTCTACCTCCTGACGTCA
CAGAACCACGCAAGGTCTTCATCTTCAAGGGACTTGAGCGAACGCGTCAC
TTTATTGCATGGACATACGAGGAGATGGGGTTTGGCATAATGAGATACCT
GCCACTGCAACGGGTGTCGCATCCTAACCTGGAAGTTACGGACTCGTCCT
TCGATGGTGTCCGGGTTCGAGTCTACAAACCAAAAGCTCAGAAAACGGCG
AAAGGGGGCAAGATGGCTGGTCTACTGTGGTTCCATGGAGGGGGATGGGT
CATTGGATCAATCGATTCATGCGACGCTCTTGTCGGACGCATCGCAAACC
AAACGGGTGCTGTGGTGGTGTCAGTTGAATATCGGCTGGCCCCTGAACAC
AACTTCCCCATTCCGTTTGAAGACTGTCTAACGGCTACCCAACATTTCCT
CCAACACGCCAGTGAGTACGGAGTCGACCCGACAAGAATCGGTGTGGCGG
GAGACAGCGCAGGGGGTAACCTGGCTGCCGCGGTCGCTCTGAGGCTGAAA
AAGGACGACAAAAAGAAGTTCCCGCCCCTAAAACTCCAAGCCCTCGTATA
TCCCTCTCTCCAAACGTTCGACTTTCAGACCCCGTCGTATGTCAGAGGAC
GCAGTTTCTTCGTTACCCTCCCTTCTGAGGTGACGATTGGACTCTGGATA
AGATACCTCAACAACAACATGTCCCTGGTCGACATATTTTCAAACAACGG
CCACACGGCTGCGCTGAAGAAGTCGCGCTTTGCCTCTTACGTTGACCGAC
ACTTTCTCGACGAATCCGTACCAAGATCGACGCCTGATGAAGACGTCAGC
ATAGATCTACCAGACGACATTAAGGACATCCTGAATCCCTACTTTTCTCC
ACTGATGGCAGAAGACGCCGACTTGTCCGGACTGCCGAACACCTACGTCA
CTGTTTGTGGGAAGGACGTACTGAGGGATGACGGGATCATGTACGCCAAG
AGGCTGGAAATGGCGGGAGTTCAGGTCCAACTGGTGCGCTACCCGTCAGG
CTTCCACGGGATCTTGACCTTCGCATCGAAACCGTTTTACTTTAAGGTCG
GAAAACAGATGGAACAGGACTTGACAACGTTCTTACGTGATCATCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:1778905..1781248 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95529_evm0 |
| Biotype | protein_coding |
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