transcript:BL95495_evm3 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95495_evm3
Unique Nametranscript:BL95495_evm3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95495_evm3

>transcript:BL95495_evm3-protein ID=transcript:BL95495_evm3-protein|Name=transcript:BL95495_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
MITLSVHVTSSLDLKAVIAANNEKFMACFKANDMKGLAALYTEDCKLMPT
GSDTLHGREGPEKVFSGAWAGGVRAVELKIEEVGPMGSDVIYERSTYTMK
TEDGSVFDAGKFVVIWKKVGGEWFMYIDIFNSNKA
Run BLAST on NCBI

mRNA from alignment at Sc0000049:1199596..1200739+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95495_evm3 ID=transcript:BL95495_evm3|Name=transcript:BL95495_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=1144bp|location=Sequence derived from alignment at Sc0000049:1199596..1200739+ (Branchiostoma lanceolatum)
ATGATAACGTTATCTGTGCATGTAACTTCGTCTCTAGACCTGAAGGCAGT GATTGCGGCAAACAATGAGAAGTTCATGGCCTGCTTCAAGGCTAACGACA TGAAGGGTCTGGCTGCCCTATACACGGAGGACTGCAAGTTAATGCCGACA GGATCGGACACTCTGCACGGCCGAGAAGGTAAGGGATTGCCGAATCACTG ATGATGAATCTTTTGATGGCTACTACACTTAAGAAAATTGAAATCTTAGA TCTATCAAAATTAGAGACCAAAATATTCCCTTTCAGCTTTGTGTCTTTGC CAAAACTTTTCCCGGCTACTGTATCTCTCCCTGTCTCTCTCTCTGTGCTG TTTCTCTGTCTCTCTCCGGTTTCTGTCTGTCTCTCTCTCTGTCTGTCTCT TTCTCTCTGTCTCTCTTTGTCTCTCTCCTGTGCGTGGGGATGGAGGTGTC AAGAACGTACGCAAAGATACCGATGGCAATCAAATTACCTAAATCAATTT TTTGCTGAGTACAGGCCCGGAAAAGGTGTTTTCTGGTGCCTGGGCCGGCG GTGTGCGGGCCGTGGAGTTGAAAATAGAGGAGGTTGGGCCGATGGGCAGT GACGTCATCTACGAGCGTAGCACCTACACTATGAAGACAGAGGACGGCAG TGTGTTTGACGCTGGCAAGTAAGTCAGCATGCGTCGTGCATGTTTATGTG TGCTGTTCGTTTCTTTATATTTTGTTTTCATACAGTAAACGGTGTAGAAC ATGTACCATAATGTTGACTGATAACTTCCTGGATTGACACAACATTTTAA GAGAGATCATTATGCTTCGCTAAAAACACGCGTGTTGTTTCTTCAGGCTA AAATTCTCTACTGCTTACGAACTAAGTCGAGCTCGCTCTGAACCTTTCAG TGACTAATATTTCCCCTTTTTAAGTCGTTCTGACAAAACCGTCCAAACCG TAACAAACTTCCCTTCATCTTGCTTGTTTGAAATGTCTGCAATGTCTATT ATGTACTACCAACATTCTGAAATAATATATTTAGAAATATTTACTCTTTT TTTCTTCACATTTTACAGGTTCGTTGTGATCTGGAAGAAAGTTGGCGGAG AATGGTTCATGTACATCGATATCTTCAACTCAAACAAAGCCTGA

Coding sequence (CDS) from alignment at Sc0000049:1199596..1200739+

>transcript:BL95495_evm3 ID=transcript:BL95495_evm3|Name=transcript:BL95495_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=1224bp|location=Sequence derived from alignment at Sc0000049:1199596..1200739+ (Branchiostoma lanceolatum)
ATGATAACGTTATCTGTGCATGTAACTTCGTCTCTAGACCTGAAGGCAGT
GATTGCGGCAAACAATGAGAAGTTCATGGCCTGCTTCAAGGCTAACGACA
TGAAGGGTCTGGCTGCCCTATACACGGAGGACTGCAAGTTAATGCCGACA
GGATCGGACACTCTGCACGGCCGAGAAGGCCCGGAAAAGGTGTTTTCTGG
TGCCTGGGCCGGCGGTGTGCGGGCCGTGGAGTTGAAAATAGAGGAGGTTG
GGCCGATGGGCAGTGACGTCATCTACGAGCGTAGCACCTACACTATGAAG
ACAGAGGACGGCAGTGTGTTTGACGCTGGCAAGTTCGTTGTGATCTGGAA
GAAAGTTGGCGGAGAATGGTTCATGTACATCGATATCTTCAACTCAAACA
AAGCCTGAATGATAACGTTATCTGTGCATGTAACTTCGTCTCTAGACCTG
AAGGCAGTGATTGCGGCAAACAATGAGAAGTTCATGGCCTGCTTCAAGGC
TAACGACATGAAGGGTCTGGCTGCCCTATACACGGAGGACTGCAAGTTAA
TGCCGACAGGATCGGACACTCTGCACGGCCGAGAAGGCCCGGAAAAGGTG
TTTTCTGGTGCCTGGGCCGGCGGTGTGCGGGCCGTGGAGTTGAAAATAGA
GGAGGTTGGGCCGATGGGCAGTGACGTCATCTACGAGCGTAGCACCTACA
CTATGAAGACAGAGGACGGCAGTGTGTTTGACGCTGGCAAGTTCGTTGTG
ATCTGGAAGAAAGTTGGCGGAGAATGGTTCATGTACATCGATATCTTCAA
CTCAAACAAAGCCTGAATGATAACGTTATCTGTGCATGTAACTTCGTCTC
TAGACCTGAAGGCAGTGATTGCGGCAAACAATGAGAAGTTCATGGCCTGC
TTCAAGGCTAACGACATGAAGGGTCTGGCTGCCCTATACACGGAGGACTG
CAAGTTAATGCCGACAGGATCGGACACTCTGCACGGCCGAGAAGGCCCGG
AAAAGGTGTTTTCTGGTGCCTGGGCCGGCGGTGTGCGGGCCGTGGAGTTG
AAAATAGAGGAGGTTGGGCCGATGGGCAGTGACGTCATCTACGAGCGTAG
CACCTACACTATGAAGACAGAGGACGGCAGTGTGTTTGACGCTGGCAAGT
TCGTTGTGATCTGGAAGAAAGTTGGCGGAGAATGGTTCATGTACATCGAT
ATCTTCAACTCAAACAAAGCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95495gene:BL95495Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95495_evm3-E1BL95495_evm3-E1-1564476830-224260Branchiostoma lanceolatumexon
BL95495_evm3-E2BL95495_evm3-E2-1564476830-224262Branchiostoma lanceolatumexon
BL95495_evm3-E3BL95495_evm3-E3-1564476830-224264Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95495_evm3transcript:BL95495_evm3-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:1199596..1200739 +
Properties
Property NameValue
Transcript idBL95495_evm3
Biotypeprotein_coding