transcript:BL95492_evm1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95492_evm1
Unique Nametranscript:BL95492_evm1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95492_evm1

>transcript:BL95492_evm1-protein ID=transcript:BL95492_evm1-protein|Name=transcript:BL95492_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=69bp
MALGLYSLIEAALLCVNAIAVLNEERFLSKVGWATDTVSGFGEQPGMKSQ
IINLIRSVRMVMRKFELAK
Run BLAST on NCBI

mRNA from alignment at Sc0000048:1740533..1742341-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95492_evm1 ID=transcript:BL95492_evm1|Name=transcript:BL95492_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1809bp|location=Sequence derived from alignment at Sc0000048:1740533..1742341- (Branchiostoma lanceolatum)
ATGGCGCTGGGTCTGTATTCTCTGATCGAAGCTGCTCTGCTCTGTGTGAA CGCGATTGCCGTGCTGAATGAGGAGAGATTCCTGTCTAAAGGTACTGACT CTATGTTTGAGACTTCATAACGCATTGTAGATGTGACAGACGTTGCTATT TTGCTCTCAGATTCCTTGTGCAAGGCCTGTCTGTTTGTGGGTATCGCGGT GCCAAGTTGGCATGCAGTTGTGATCGTGGCGACTCTTGCCTTGGGGGGAG TCTTCTGCTCAGGAGGTTTGGAGGGTAGGCACAGCATAAAGCTTACAAAC AAAAAGCACCCTCCAAATAGTAGCAACGGCTAACGAAAGGGCTACTCTCC AATCGGAGGTCAGAGGGAGAGGTCGTCGTCACTTTTGGTGACTCACTTTC CAACAGCCCTCCCATCTACTAGTAAATGCTCTCCAAGCAGAGGTTGGGTG GTCGTTTACCTTCTTCTGAACTGGTTTGGAGAGTAGGAGGCGTCGATGGG CCCCACGTTTGCAAGTCAATACCTCTTCATAAAAATCGTGATTTTTGAAT ACACGTAGTCAGCTGCACGTAGTCAATTTGATGCAGTGTTTTCTGGGCCG AAAGGGTGTTGCTGATAGATAAACAAAGATGATACCTTCCATAACTAATT TAACATTTTACATGTAACTCAATATGTTAGGAATAGAATTTCTTTATTTT TATTTGTAGGCGACCAAGAAGGTTTTAACCACCTTGAAGGTGACTTAGCT AGGGATTCCTCATCTTAGTGAGGGCCGTTGTTTCGTGATTGTTATTGGAA TAAAATAATAAAATAACAGTCCAATGGATACAGATCGCCATTATGGCAAA GTATAATACTTGCTTATAGAAAGTTTTGGGAGAGAGTTTTCACATCTTTT GCCTTTTTATTTGCATTGTGTTGTATTTTAGTGAAACATTAGAAGGTTGA TATTCACACATAGCAGTGTTTAGCCATGTCTGTGAGTATGTTGTGTGTTT GTGTTGCAGTTGGATGGGCCACAGACACAGTCAGCGGGTTCGGTGAGCAG CCTGGGATGAAGTCTCAGATCATCAATCTCATCAGATCAGTGCGCATGGT AATGAGGAGTAAGTATGATGTCATTATCAGCCTGTCTGCATCCTCTCCTG ACAGGTCTGCAGCTTGTTTTATTACTGTTAATTCTTTTACATTCACAGTG GTTTTATTTCGTGGTGTTTAAAATTTGCGGTTAAAACAATTCTGTATTGA AGTAGTAATGTATATTCGCAGTGTCATGAATTCGCTGTGTAGTCCTTGGT AGAGGTCACTGTAAAACTGCAAATGTGTCAAGATTTACAGTACAGGATAC CTGAGAGCAAAGAATGGCCCTGATATCTGTACTTCTGTCCTGACTGCATT AGTGCTGGCTAGCCATCAGCCAATCAGATACATGTATTCCCCTGCATGTT GTGAGAAGGAAAGTTACCAGCCAATCACATTACTGTGTATGGTGACCAGA CTCCATTTAGGCCACATGCTGGTTCCCTCCTCCTAACCACCATTAGCTAC TTTCCTTTTTTTTACTTTCACCATTACTGGCATTAGCCACACATTTGTAA AAATTATCCCTCTCCCTTGAAAATCTGCTGGAGGGTACTAATTCATACAG GTGGCCTATATTCAACTTACCATTTTGTCACTCAAATATATATCCATGAT CCATCTCTAGTTTCTTTCTTTCATTACATTATTGTGGTTGACCAATACGA TATATCTATTATCATTCCATGTTGTGATTTTATTTACAGAATTTGAACTC GCGAAGTAG

Coding sequence (CDS) from alignment at Sc0000048:1740533..1742341-

>transcript:BL95492_evm1 ID=transcript:BL95492_evm1|Name=transcript:BL95492_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=630bp|location=Sequence derived from alignment at Sc0000048:1740533..1742341- (Branchiostoma lanceolatum)
ATGGCGCTGGGTCTGTATTCTCTGATCGAAGCTGCTCTGCTCTGTGTGAA
CGCGATTGCCGTGCTGAATGAGGAGAGATTCCTGTCTAAAGTTGGATGGG
CCACAGACACAGTCAGCGGGTTCGGTGAGCAGCCTGGGATGAAGTCTCAG
ATCATCAATCTCATCAGATCAGTGCGCATGGTAATGAGGAAATTTGAACT
CGCGAAGTAGATGGCGCTGGGTCTGTATTCTCTGATCGAAGCTGCTCTGC
TCTGTGTGAACGCGATTGCCGTGCTGAATGAGGAGAGATTCCTGTCTAAA
GTTGGATGGGCCACAGACACAGTCAGCGGGTTCGGTGAGCAGCCTGGGAT
GAAGTCTCAGATCATCAATCTCATCAGATCAGTGCGCATGGTAATGAGGA
AATTTGAACTCGCGAAGTAGATGGCGCTGGGTCTGTATTCTCTGATCGAA
GCTGCTCTGCTCTGTGTGAACGCGATTGCCGTGCTGAATGAGGAGAGATT
CCTGTCTAAAGTTGGATGGGCCACAGACACAGTCAGCGGGTTCGGTGAGC
AGCCTGGGATGAAGTCTCAGATCATCAATCTCATCAGATCAGTGCGCATG
GTAATGAGGAAATTTGAACTCGCGAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95492gene:BL95492Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95492_evm1-E1BL95492_evm1-E1-1564476830-222320Branchiostoma lanceolatumexon
BL95492_evm1-E2BL95492_evm1-E2-1564476830-222318Branchiostoma lanceolatumexon
BL95492_evm1-E3BL95492_evm1-E3-1564476830-222316Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95492_evm1transcript:BL95492_evm1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000048genomeSc0000048:1740533..1742341 -
Properties
Property NameValue
Transcript idBL95492_evm1
Biotypeprotein_coding