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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95477_evm0 >transcript:BL95477_evm0-protein ID=transcript:BL95477_evm0-protein|Name=transcript:BL95477_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=265bp
MPGIMCWSNARLDGKTVIVTGANKGIGFETAKDLAVRGAKIILACRDLTR
AQKAADDIKEETKNENVIVHQLNLASLASVRRFAQKINETEEQLNILINN
AGVMMPPKSQTGDGFELQFGVNYLGHFLLTNLLLDLLKKSAPSRVVSVSA
YAHHAGILNWGDLQWEKREYDPLESFGDSKIALIYFTRTLAKKMEGTGVT
TYCLHPGIIKTDQYQHIATSLGPWRSVFINIVASWFGKTLVHGAQTTIHC
AVTEGLEDKTGQYFT Run BLAST on NCBI mRNA from alignment at Sc0000047:1724958..1727928+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95477_evm0 ID=transcript:BL95477_evm0|Name=transcript:BL95477_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2971bp|location=Sequence derived from alignment at Sc0000047:1724958..1727928+ (Branchiostoma lanceolatum)
ATGCCAGGTATCATGTGCTGGAGTAATGCCCGTCTTGACGGGAAGACGGT
CATAGTAACTGGGGCCAACAAGGGCATCGGCTTTGAGACAGCCAAGGACC
TGGCAGTAAGGGGTGAGTCATAGAACTGATCAGATAAAACTCTTGATCTG
TCATGAAAATCTGTGTTAATTTTTCATAGAAGCAAAGATAGAGGGTTATC
ATTTTGAATGTTAATCAGAGTTGATAATTAAGATATAAACTGATCTCCAA
CTGAAATATTGGACGGTATGTTGTTCTATAGTTGTTCTATCTTCTCATGT
GTGTATTGCAGTCATGTATGAACCAGGTGCTGTGCTTTGTATGTATTGTA
ATCATATGTATATATATGTACGTTCTGTGTTTTTCTGAATGCAGGAAGAA
TAGATTAGATTGTAGTGGATTGGACTCACGCACTGCCAGTTTTCTTCATC
TGTCTGTGGACACCTGACTATCTGTACTACGTGTGACGTCAGTAATGGGT
CAAATGTCGTCTGAAGTTGATGTCACCCCCCGTCCCGGTTGAGAGAAGGT
TGGTGCGCCCTGATGTAGATGGCCACCTTTACTACTCTCACAAAGTAGTC
CTGTTTGGTATACAGAATACTGTAAATGACTTTGATATAGCGTCAGGAAA
ATATATAGCGGTTGGGGGAAAATGGAGTGGGTCACGGCTCTTAATTTTAC
GGTGGGAACAAACATTACTGTCTTAAATATTAGTTATCAAATATTTGCGA
TGATGTAATTTTAGCTGTTGAATAGAATCAGCTAAAATTAAGTTACACTT
ACAGTTAACAAATCAAGAGTTACAGTAAATATTCTCCAACGAAACTGTGT
GACCCAAGAACTCAATATGAATACATGTTGTAAGACATCTGATGATGCAG
AGCTGGGTTATCTTTGTTCCAAGAATATGGTTTGATTAAAGATGATAAGC
TTTATATCATTATCTGAGCTGGTGCACTGGTTTATTATATGCATGGTGTT
GGAAACAGATGTGTAAAATGGAACATCAATTTTACTAAACGCCAATTTTT
CTAGGGGTGGGTCATGAAGTAACGTAAACTCTCCCAAAGACTGCCACATT
AAAAAAATCGTGTTAACTATTCTTCTCAAGAATGTCTTACATGTGACTGG
AAATCCAAAGATTGCATACTTGGGGGATTACTAATGCTACGTAAGTAGAG
CTCTTAAGAATTTCTTTAAAATATGTCAGTCATAGCTAGGGTCCCTGGTA
GAATTATGATAGCTGACATTACGTGATATGGAAAAATCAATCCTCAGTCT
GAACAAGATCCTTTCTTTCAACAACTGGCTGGCAGGTGCGAAAATCATCC
TGGCCTGCCGAGATCTGACCAGAGCCCAGAAAGCTGCTGACGACATCAAA
GAAGAGACTAAGAATGAGAACGTCATCGTGCATCAGCTGAACCTGGCATC
CCTGGCCTCTGTCCGCAGATTCGCTCAGAAAATCAACGAGACAGAAGAAC
AGCTGAACATTCTGATTAACAATGCAGGTGAGTTTGCCAGGAGCAGGTGA
CTACTGTTTTAATGTCACTTGAGTAGAAACCGGGCGAAGGGGCAAGTATG
CCGCTCCCGGGATTGGAACCCGCGCCGATCCCGATCTGTACGGCTTGGGA
ATCCAACGCGCTAACCACTAGGCTAAAATTAAAGGTCCGTACCCATTAGA
CTGGTCAGTTAGTGGAGGTTGATCCCCACTGCTACACTTGTATTAATCTG
AAAATAAGTTACTCTTACATCTGCTGGACTCAAGTTGCTAAAATGATTTT
CTTGTGCATCTACCACTCCATTGTGGTAACTGTAGCACCTTTAGATCAAA
AGATACAAAAAGGGAAGTTCTGCTGCAGTACCATTACAAGATGGTAGGAG
CCAGGCCTAAATATAATTGTTTCGAGGTCTCATCATGACAACGTACCAAA
TATCCAGACAATCCAAAGGCATGATAACTCTAGAATGCCTGGATGTATTC
AATCCATCCATCTTTTTGGCACTTTTCTCGTGTGATAGTCAAGTTTTTTT
TGTTTTTTTTTGCTCCTGTGATTTCAAGGGGTGATGATGCCTCCAAAGTC
ACAGACAGGGGATGGATTTGAGCTGCAGTTTGGCGTGAATTACCTGGGCC
ACTTCCTCCTCACCAACCTCCTCCTGGACCTGCTGAAGAAGTCTGCTCCC
AGCCGGGTCGTCAGTGTCTCTGCTTACGCTCACCACGCAGGCATACTGAA
CTGGGGCGACTTGCAATGGGAGAAGAGGGAGTATGATCCGTTAGAGTCCT
TTGGGGACAGCAAGATAGCACTTATCTACTTCACCAGGACACTGGCAAAG
AAGATGGAGGGTAGGCAGTTTGGACAGCTTTTAGTTGCAAATGAACATCT
CTCAACAGTGAAGTTGATATAGAGGAATTGGTGACTGCATGTTTCAAAAA
GTTCTTTTTTACCCAATAGTATATTTACCCAAAAGTATAGGACAATCAAG
AGCAGAGTAAATTAGAGTAGGGTAGGGTGGAATTTATGGCCAGGTAGGAA
CTGTAGAATTCTAATTTGGTCTGCTGTCCATTTGATGGACATTGTGGGTT
GTCCAATCTTCATTCAGAATCCGAAAAAGTTATGACAGTCTTGGTGTGAT
TAGAGCCAAGGTCAGTCACATTAAACCAAGTTAAACGTTAATAATGTTTC
TCTGGTCAACAGACTGAGATACTAAAAGACTGATACAGTATATTGTTTTC
TCCTTATAGGGACAGGTGTGACGACATACTGTCTGCACCCAGGAATAATC
AAGACAGACCAGTACCAACACATAGCAACCAGCCTAGGCCCATGGCGTAG
TGTCTTTATCAACATCGTCGCCAGCTGGTTTGGCAAGACTTTAGTTCATG
GTGCCCAGACTACCATCCACTGTGCCGTGACAGAGGGTCTGGAGGACAAG
ACAGGCCAATACTTCACGTAG Coding sequence (CDS) from alignment at Sc0000047:1724958..1727928+ >transcript:BL95477_evm0 ID=transcript:BL95477_evm0|Name=transcript:BL95477_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3192bp|location=Sequence derived from alignment at Sc0000047:1724958..1727928+ (Branchiostoma lanceolatum)
ATGCCAGGTATCATGTGCTGGAGTAATGCCCGTCTTGACGGGAAGACGGT
CATAGTAACTGGGGCCAACAAGGGCATCGGCTTTGAGACAGCCAAGGACC
TGGCAGTAAGGGGTGCGAAAATCATCCTGGCCTGCCGAGATCTGACCAGA
GCCCAGAAAGCTGCTGACGACATCAAAGAAGAGACTAAGAATGAGAACGT
CATCGTGCATCAGCTGAACCTGGCATCCCTGGCCTCTGTCCGCAGATTCG
CTCAGAAAATCAACGAGACAGAAGAACAGCTGAACATTCTGATTAACAAT
GCAGGGGTGATGATGCCTCCAAAGTCACAGACAGGGGATGGATTTGAGCT
GCAGTTTGGCGTGAATTACCTGGGCCACTTCCTCCTCACCAACCTCCTCC
TGGACCTGCTGAAGAAGTCTGCTCCCAGCCGGGTCGTCAGTGTCTCTGCT
TACGCTCACCACGCAGGCATACTGAACTGGGGCGACTTGCAATGGGAGAA
GAGGGAGTATGATCCGTTAGAGTCCTTTGGGGACAGCAAGATAGCACTTA
TCTACTTCACCAGGACACTGGCAAAGAAGATGGAGGGGACAGGTGTGACG
ACATACTGTCTGCACCCAGGAATAATCAAGACAGACCAGTACCAACACAT
AGCAACCAGCCTAGGCCCATGGCGTAGTGTCTTTATCAACATCGTCGCCA
GCTGGTTTGGCAAGACTTTAGTTCATGGTGCCCAGACTACCATCCACTGT
GCCGTGACAGAGGGTCTGGAGGACAAGACAGGCCAATACTTCACGTAGAT
GCCAGGTATCATGTGCTGGAGTAATGCCCGTCTTGACGGGAAGACGGTCA
TAGTAACTGGGGCCAACAAGGGCATCGGCTTTGAGACAGCCAAGGACCTG
GCAGTAAGGGGTGCGAAAATCATCCTGGCCTGCCGAGATCTGACCAGAGC
CCAGAAAGCTGCTGACGACATCAAAGAAGAGACTAAGAATGAGAACGTCA
TCGTGCATCAGCTGAACCTGGCATCCCTGGCCTCTGTCCGCAGATTCGCT
CAGAAAATCAACGAGACAGAAGAACAGCTGAACATTCTGATTAACAATGC
AGGGGTGATGATGCCTCCAAAGTCACAGACAGGGGATGGATTTGAGCTGC
AGTTTGGCGTGAATTACCTGGGCCACTTCCTCCTCACCAACCTCCTCCTG
GACCTGCTGAAGAAGTCTGCTCCCAGCCGGGTCGTCAGTGTCTCTGCTTA
CGCTCACCACGCAGGCATACTGAACTGGGGCGACTTGCAATGGGAGAAGA
GGGAGTATGATCCGTTAGAGTCCTTTGGGGACAGCAAGATAGCACTTATC
TACTTCACCAGGACACTGGCAAAGAAGATGGAGGGGACAGGTGTGACGAC
ATACTGTCTGCACCCAGGAATAATCAAGACAGACCAGTACCAACACATAG
CAACCAGCCTAGGCCCATGGCGTAGTGTCTTTATCAACATCGTCGCCAGC
TGGTTTGGCAAGACTTTAGTTCATGGTGCCCAGACTACCATCCACTGTGC
CGTGACAGAGGGTCTGGAGGACAAGACAGGCCAATACTTCACGTAGATGC
CAGGTATCATGTGCTGGAGTAATGCCCGTCTTGACGGGAAGACGGTCATA
GTAACTGGGGCCAACAAGGGCATCGGCTTTGAGACAGCCAAGGACCTGGC
AGTAAGGGGTGCGAAAATCATCCTGGCCTGCCGAGATCTGACCAGAGCCC
AGAAAGCTGCTGACGACATCAAAGAAGAGACTAAGAATGAGAACGTCATC
GTGCATCAGCTGAACCTGGCATCCCTGGCCTCTGTCCGCAGATTCGCTCA
GAAAATCAACGAGACAGAAGAACAGCTGAACATTCTGATTAACAATGCAG
GGGTGATGATGCCTCCAAAGTCACAGACAGGGGATGGATTTGAGCTGCAG
TTTGGCGTGAATTACCTGGGCCACTTCCTCCTCACCAACCTCCTCCTGGA
CCTGCTGAAGAAGTCTGCTCCCAGCCGGGTCGTCAGTGTCTCTGCTTACG
CTCACCACGCAGGCATACTGAACTGGGGCGACTTGCAATGGGAGAAGAGG
GAGTATGATCCGTTAGAGTCCTTTGGGGACAGCAAGATAGCACTTATCTA
CTTCACCAGGACACTGGCAAAGAAGATGGAGGGGACAGGTGTGACGACAT
ACTGTCTGCACCCAGGAATAATCAAGACAGACCAGTACCAACACATAGCA
ACCAGCCTAGGCCCATGGCGTAGTGTCTTTATCAACATCGTCGCCAGCTG
GTTTGGCAAGACTTTAGTTCATGGTGCCCAGACTACCATCCACTGTGCCG
TGACAGAGGGTCTGGAGGACAAGACAGGCCAATACTTCACGTAGATGCCA
GGTATCATGTGCTGGAGTAATGCCCGTCTTGACGGGAAGACGGTCATAGT
AACTGGGGCCAACAAGGGCATCGGCTTTGAGACAGCCAAGGACCTGGCAG
TAAGGGGTGCGAAAATCATCCTGGCCTGCCGAGATCTGACCAGAGCCCAG
AAAGCTGCTGACGACATCAAAGAAGAGACTAAGAATGAGAACGTCATCGT
GCATCAGCTGAACCTGGCATCCCTGGCCTCTGTCCGCAGATTCGCTCAGA
AAATCAACGAGACAGAAGAACAGCTGAACATTCTGATTAACAATGCAGGG
GTGATGATGCCTCCAAAGTCACAGACAGGGGATGGATTTGAGCTGCAGTT
TGGCGTGAATTACCTGGGCCACTTCCTCCTCACCAACCTCCTCCTGGACC
TGCTGAAGAAGTCTGCTCCCAGCCGGGTCGTCAGTGTCTCTGCTTACGCT
CACCACGCAGGCATACTGAACTGGGGCGACTTGCAATGGGAGAAGAGGGA
GTATGATCCGTTAGAGTCCTTTGGGGACAGCAAGATAGCACTTATCTACT
TCACCAGGACACTGGCAAAGAAGATGGAGGGGACAGGTGTGACGACATAC
TGTCTGCACCCAGGAATAATCAAGACAGACCAGTACCAACACATAGCAAC
CAGCCTAGGCCCATGGCGTAGTGTCTTTATCAACATCGTCGCCAGCTGGT
TTGGCAAGACTTTAGTTCATGGTGCCCAGACTACCATCCACTGTGCCGTG
ACAGAGGGTCTGGAGGACAAGACAGGCCAATACTTCACGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1724958..1727928 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95477_evm0 |
| Biotype | protein_coding |
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