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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95432_evm3 >transcript:BL95432_evm3-protein ID=transcript:BL95432_evm3-protein|Name=transcript:BL95432_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=153bp
MRPARRTGWDRRGGAEDPGEGPDYSGSGVCKWFDVSKGFGFITPDGGGDD
IFVYQKLRDSVYTIVRHWPEIALASLSEARVHICMRHKTEREGEVYRAPY
GSRDGETTGVPTEDIVQQGAEKAPVKPPSAANAYSTASWPQVNSPTFPIA
PPT Run BLAST on NCBI mRNA from alignment at Sc0000040:160397..164158+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95432_evm3 ID=transcript:BL95432_evm3|Name=transcript:BL95432_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=3762bp|location=Sequence derived from alignment at Sc0000040:160397..164158+ (Branchiostoma lanceolatum)
ATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGTCAGTGTGCCCC
GCGCGCTATGACGGCCGCCCACGCCGTCCTGGTGTGGTCAGGGCCCCTTG
TGGTCAAGCTAGTCGCCCGGGAGTGACCGGAGACAGCGCGTAGGGACTGC
GATCCTTCCCCGGACCTGTCCAAATCACTGGGAGGCCGCCATGTTCGTTG
TCGATCGCGGAGGACGGTAGTAGCCCGTCCATCGTGTTGTAAAGGCGAAC
CGTGCGGCGCATGAAGACCTCTCCGCCGACCCCATTGTTGCCCTGTCCCG
CGCACTGACCGCCCCATGTGCCCCCCCGCCGCACTCACTCATCCTACCCC
TGCTCTTCCCGTTCCTTCAGGGGGAGCCGAGGACCCCGGGGAGGGCCCGG
ACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTC
GGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAGT
AAGGAGCCTGCCCTTCACGTATACACATACATCTATATACGCATATACAG
CGCTTTAGATACGCCGGCCTGCACATGTTGACACCCCGTATAGCGGTACT
TCCGGCTGTATCGCGCACACGCACAAACGTATACAAATATCTGTCACTAG
ATACATTAACTTTTTATACAAGAAAAGTATTGAGTATACTTTTTAACCTG
ATCTTCAACCCATGTGACTTTAATAGATATATGATAAGGCATTTTATCTA
AAACGTTTATACAACTTTCTTTACATTTGTAGAACTCTAAGTCTAACACA
TTGTTTCTTGAATTTCATTGGTATTTTCTTATCTACTTTTTATAAAAGTA
TGAATATGTCTTCTGTATAGATGATGATAAAGGATGTAGTCATCAAAATA
TTTTAAAGGCTCTTTTAGAAATGGAATAAGACAATTTTTACATAAGCCTT
TTATCCCACACTTTCTTTACATATGTAAAAGGTCTTTACAGTGTTTGTAG
AAGTAGAATTTTATTGGTATTGGCTTTTCTGCTTTTTATGAATGAATATT
TCTTCTATGGTGATAAAGGAGTTCGTCATTTAAGCGTTTTAAAAGCTTTT
GAAACATTATGACCACTTGGATAATGGATAGATGAAATAACACTGGATAT
AAGAAGAAGAAAAAGAGGAACAAAAGACACAAATGAATTAAATAGTTGTC
TTCCCAGTGTTTATCACAACAATGGTGAGGAGAAAGCCTTGGGGATTACA
CGGAAAGAGGATTCCATCCCGAATTGTTGACCATCCTTGGTATTTTTACT
TCCATACTTGAACTGAACAGGGAATAGGAGTTAGGTCTGTTGTTGATCGA
ATTGATAAGAGGGCATTGCTCTTTCTTGTGTATACACTTGCTTTGATGGT
GTAGAGCAGAGCTTGGTGTAGAGTTGTAGGTCTGGGAGGTTGTCTTTGGG
AGGTCAGTCATTGTCATATTGTCCGGAGGGTTTCCGTTTGTGTGTTAGGG
CTGCGAGAAAAATAAGCGGACCGTCCGCGGTGGACTCGAGTAACCCTGTC
CGTGCATGGAGGTTAACCGTTTCATTTGACCTCGTCGGGCACAAAGATAC
CTAGATTATGTTCTGTAACACTGCCTGGTGGATACAAAAGCCTTAAAGTT
CTGTAAAAATCCTTAAGTGACACCGAAGTAGACAATCCCTTTGCCTCTGT
TGTGACAGAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCC
GAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATGTATGGT
CCGTGACTGCCCCAGCGGTGAACCTAGCGCTCTGTGGACATTTCAAGGTC
CCGCTGTATTTATTACCTCCCAAATCTCTCCCTCCGTTTTTAGAACTAAC
CAGATATGTACCTGTATAGATGATGTACCACAGGCCTTTGATCTTTCGAC
ATGTGTAGGAAGAACCACATCAGGGCGTGGACCGAAGAGAAAGGATTTCT
TTTTTACTAGGGTCGCTCGGTGTGTGTGTGTTTTTACGAACTCCCCTGTC
CAAGCTCGTTTGCTCACTGTTCTAGTTCGGTTAGGTTTTCTTTTCTAACG
GAATGTTGAATGGGCGTTCCAGGTCTAAACGTACCGATACAGGAGGTGTT
GAGAGAAAAGTGTAACGCGGTAAAAATCGGTGACCTTGGTAGCGCGGGGA
CCCGTTAATACGGAACCTGTCGGGCCGTGTTGTCGGCCACTGTTTTAACA
TTCCCCCGACAGTAACGGCAGGGATTGGCCGGTCGGCTTTTTAAAGGGTA
ACNGATGACCGGAAGTACAGAGTACTCAGCACAAAAAAGCGAAGGGCGGA
AGAAGTCGTCAAACATTTCCCACTCTCTCTCTCTCTCTGTATTTATGTTC
GAGAAAAAAACTTCGCACATTGCCCTTTTATCAGGTTGTTGACATATGTT
GAAAACACGCACGTACGTGTACAAGCATGCCGCTTTGAACACCGTGACTT
TTTGCGCTGATTTGTTTGTACGGGGTTTAATTTTGCGGAGTGCCTTTTTT
AGGAGTGTTCCCGCCAAAAAAATGTGCCCTGGAGGCTGGTCATTGTGTGG
CCGGGGCAGTGGCCGGACACACAGACCACACGCTACGCCAGAGGGCGGCG
CTCTGTCCAGCTCGCACAAATCAACTCGTACAATGGGTCCCGGGCGCAGC
GGGGGCCGGGCGGGTCGGGGAAAGGTCGCGGGCGGTCCTGTGTGCGACAC
GGCTGCACAAGATGGTTCTCACAAGGGGAAAGACGCCGCGGAAGGAAAAA
TAAACGCGGAGAGCGGAGTTAGGTTGAAGCGCGCGGGGTGTAATACGAGG
AAGGGTCACGAACTAGTGCCCGCCAGCCTTGTACCAAGGCGAACATCAAT
TTTGTCGCGGCGTGGAATCCCTGACCACTGCTGAAAGGGCCGAGGGTAGA
CCGGCCGGCGCCACCGCAGCCGGCCTATTTCGGCCGAATCAAAGAAGGGG
GCGGGTTTGAGGGCACCCTCGGGAGAAGGGGGGGGGGACGTGAAAGACGC
GCTCACCAATCCTGCTACTAGATTCACTCTTGGTTTTCGAGAGAAAACAA
ACTTGTGGAAAAAAAAGAAGGAAAGAGAATATAAGCGCATTCTGCTCGCG
AAGTTTGCGCTGGGTAAAAGAGGGGGAGGGGAATCCAACTGCCTCCGCTT
CGTTTGACCTTTGAACTTTTTCCACGATATCGTACATTCGCAAAACAGCG
TAAATATACCGTTGGGCCTACGCTCTAGGCGTGTCCCCCTATACTTCCAC
TCGCACTTCGCAAGGATACAGAGCAAAAAAAAACACACATGCACACTCGC
ATAGCGCGGCGTGTTTTCCCTGTCGGATTACCCGTTTGGGGTCAGTGAAA
TCCCGGTCCTATCGACGGTTTGAATTTGATTTGGATAATCAATTTTATTC
TCAATGACAGGTAGCACAGCCACGCCATTGGCTGTTGCCAGGGCGGCCGC
TGATTGGTATGTGTAATTAGTGGCAAAGAGCCATGTAATTGTGCGTCACG
TGTAGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCCTTAC
GGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCGTGCA
ACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAACGCGT
ACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCATCGCT
CCGCCGACGTAA Coding sequence (CDS) from alignment at Sc0000040:160397..164158+ >transcript:BL95432_evm3 ID=transcript:BL95432_evm3|Name=transcript:BL95432_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=1848bp|location=Sequence derived from alignment at Sc0000040:160397..164158+ (Branchiostoma lanceolatum)
ATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGA
CCCCGGGGAGGGCCCGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCG
ACGTGTCCAAGGGCTTCGGCTTCATCACTCCCGACGGGGGAGGCGACGAC
ATCTTCGTCTACCAAAAGTTGCGGGATTCGGTTTACACCATCGTACGCCA
TTGGCCCGAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATAT
GTATGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCCTTAC
GGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCGTGCA
ACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAACGCGT
ACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCATCGCT
CCGCCGACGTAAATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGG
GGGAGCCGAGGACCCCGGGGAGGGCCCGGACTACAGCGGCTCCGGCGTCT
GCAAATGGTTCGACGTGTCCAAGGGCTTCGGCTTCATCACTCCCGACGGG
GGAGGCGACGACATCTTCGTCTACCAAAAGTTGCGGGATTCGGTTTACAC
CATCGTACGCCATTGGCCCGAGATCGCCCTGGCCTCTCTCTCGGAAGCGA
GGGTTCACATATGTATGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTAC
AGGGCTCCTTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGA
GGACATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCG
CAGCCAACGCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACT
TTTCCCATCGCTCCGCCGACGTAAATGCGGCCAGCACGAAGGACGGGGTG
GGATCGGCGTGGGGGAGCCGAGGACCCCGGGGAGGGCCCGGACTACAGCG
GCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTCGGCTTCATC
ACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAAAGTTGCGGGA
TTCGGTTTACACCATCGTACGCCATTGGCCCGAGATCGCCCTGGCCTCTC
TCTCGGAAGCGAGGGTTCACATATGTATGCGGCACAAAACAGAGAGAGAG
GGGGAAGTGTACAGGGCTCCTTACGGGTCGAGAGACGGGGAGACCACCGG
TGTGCCGACTGAGGACATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCA
AGCCGCCCAGCGCAGCCAACGCGTACAGCACGGCGTCATGGCCTCAGGTT
AACAGCCCCACTTTTCCCATCGCTCCGCCGACGTAAATGCGGCCAGCACG
AAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGACCCCGGGGAGGGCC
CGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGC
TTCGGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCA
AAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCCGAGATCG
CCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATGTATGCGGCACAAA
ACAGAGAGAGAGGGGGAAGTGTACAGGGCTCCTTACGGGTCGAGAGACGG
GGAGACCACCGGTGTGCCGACTGAGGACATCGTGCAACAAGGAGCTGAGA
AGGCCCCGGTCAAGCCGCCCAGCGCAGCCAACGCGTACAGCACGGCGTCA
TGGCCTCAGGTTAACAGCCCCACTTTTCCCATCGCTCCGCCGACGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:160397..164158 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95432_evm3 |
| Biotype | protein_coding |
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