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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95428_evm1 >transcript:BL95428_evm1-protein ID=transcript:BL95428_evm1-protein|Name=transcript:BL95428_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=254bp
MKTFEIRDDDVVILSSLKSGTNWMLEIVSNVLGGKNESASPAGPEFSELE
LWPTKKRPYYIELRERPSPRLMITHLPFQLAPPGLAAPTTKVKVIVIMRN
PKDVCVSFYYYLQKTLHLKTPESWEQHNKDFLDGKVIFGDYFDHVLGWWQ
MKDDPHFLFMKYEDLKKDFRSSVKTIAAFLEKELTDEDLDRVLTSYSVES
MRKTLAKSNGWRKNIVRKGVVGDWKNHFSAEESAKFDQKYRERMAGSGLE
FEFE Run BLAST on NCBI mRNA from alignment at Sc0000039:2218336..2221390- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95428_evm1 ID=transcript:BL95428_evm1|Name=transcript:BL95428_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3055bp|location=Sequence derived from alignment at Sc0000039:2218336..2221390- (Branchiostoma lanceolatum)
ATGAAGACTTTTGAGATACGTGACGATGATGTGGTGATACTAAGCTCTCT
CAAAAGCGGTAAGTTTTGGTGCAAAATGATGGCGTTTATCGTTAATCATA
TATATATAACGTTCTTTTCATCACGGCGACCGAGCATTTTAGCTAACTTA
ACGTCGCGTAGCGTGCCATAAGCTAAAGGTCATTTGAACCCGAGGTCCCT
GACATGCCTCGTTGACGTTGCCACTGCACGAAAAACTGAGTTTCAGGGCC
GTAAATTGCCCTACACATCCCTGGAAATTTAACATTTCCCTTATAATTAA
AAACCGGGGATTTCTGCCCTGTAAGTGGCGGGTCCGGTTCTTTACATGCA
CTAGAAACTTTCGGAAATGCACCACCTCAGTGTACAGGACGTGTAAAGGA
TCTCAAATGTCCTTACACATACCCTTGAAACGAATGTACACTGCAGGAAA
TTCGTCCTGTGTTGACCACCGTTGCTTCGTGAGTTAATAACATATTAACA
TATTGATTTAGCGGCAAAAATCACCTAACTATCTCCCCCGATTGGCCTCA
CTTAGTGCACATGCGCGATCCAGCTAAACACACGTACCGGGATACGCCTT
CCACATTTCTTTTGTTATTGGAAGCATTGTCAAGGGTACTGCCCAACCCC
CAACCCCCGTGGATGTTGCCACCCCTCCCCACTTAATCCCATCTATTTTG
CACTTTCTCACGTTTTTATTGTCACAATTAGAAACGTCATTTAACTGCTG
CATTTTCTCCAAGGTACAAACTGGATGTTGGAAATTGTGTCTAACGTTCT
TGGTGGAAAGAATGAAAGCGCATCGCCAGCAGGACCCGAGTTTTCAGAGC
TCGAGCTTTGGCCTACAAAGAAACGGCCCTACTACATCGAGCTGCGAGAG
AGGCCATCTCCTCGGCTGATGATAACCCATCTGCCATTCCAACTGGCACC
GCCAGGCCTGGCAGCTCCAACTACCAAGGTCTAGTTCAGTCCAGACACTT
TGCTACCTCCAGCGTTCTATCTTTACAATGTGATCCACTCATATTTCAAG
TTTCTATGTTATTTCCATGATCATTAAGATCCGGATTAGATAAGTAGAAG
CAGAACCTTTTGATCATGACAAATCTCTTATAAACTTGAGCAGACAAAAG
TAGTACTGAAAATATTTCGATAAAATAATGGTGAGGTCCACGTGGACCCC
AAATGCACGTGCAGAGGCTAATAAAAAAAGGACATATCAATAGAAATTGC
TCTCTAACGATGATATCATCATTTGTAGGTGAAAGTCATTGTCATCATGC
GGAACCCCAAGGATGTCTGTGTGTCGTTCTACTACTACCTGCAGAAAACT
CTGCATCTAAAGACTCCAGAATCTTGGGAACAGCACAATAAAGACTTCCT
AGATGGAAAAGGTGAGTTTTGTTTGGGCAGTGAAATACATGGTTAAAGTC
ATTGCGCAAAGAGAACTAAATGTAAATCATGTAGAATGAAAGTTATGCTT
CTTCCTCCACCATTGCCAATATACCTGTAGTACAACAAAGGAAAGAAAGA
CAACGCCGTAATGAAGTTAAGTAAGTCATTTCAGACTTTAATTTTCATTT
GTTTTCATCGGATAGGAAGACATGAGATTTTGCCCTTAAAGGCTCTCTGC
CAACTTAGTTACAAGCAATTGATACCACGTTTTTTTTAGTGAAAGATTTG
AAAAACAATCGCATGCATCAGTCGCACTTGCTTTCAGAGCCCTAATATGA
GCTTACTGAGACTAGATATGACTGGTTGATCGGTGTAATTTTAAGCGCTA
GTAAATTCTACTATAGCTTGGTGAATGGCTTTGCTGGTACAAACATCTGA
TACTCCTACAGGTATCTTTTAAGATAATCATAAATGTCAATGTTCTGTCA
TTGCAGTCATCTTTGGTGACTACTTTGACCACGTTCTTGGCTGGTGGCAA
ATGAAAGATGACCCCCACTTCCTCTTTATGAAGTACGAAGATCTGAAAAA
GGTAAGGAATGCGAAAGATATTCAAATATACTTATGGGGAATCAAATGAG
TAAAAAATGATATGGATCATTACCAACATCGCCACGATCACTTTTCGTTA
GTATCAATACATTTGTACTCATTTGCAGGATTTTCGCTCTTCAGTGAAGA
CTATAGCAGCCTTCCTGGAGAAAGAACTGACCGATGAAGATCTTGATCGT
GTGCTGACCAGTTACAGTGTAGAGTCAATGAGAAAGACGTTGGCTAAATC
TAACGGGTGGAGAAAGAACATCGTCAGGAAAGGTAAAAAAAAATTAATGT
TAACGTTTCCGTTCTGTATTGCTTATAAGAGATGAGCTGGGCTGAGATGA
ACTGGTTGATTTGATAACACACTTAAATGTACTAGCCTGGTTACAAACTT
ATCATAAATCCCGAGTCTCCTCTCCGCAAAGTATAATCGGGAGCTATGAT
AGGTTTAGATACCAGACTATAAATTTAATTCGATCATGGTAGTCCTAGGC
TAAATTGCAGATGTAACGTTACAATGTATATAAAATCACCCATGTAACAT
TGCTTAGTGCATATCGTAACATGTACATGAGAGAGTCGCACACAGAATTG
TGCACAATGCGTGCGGGAGCTTTACATAGTATGGCAAGGGGATGTTCATG
AAATTAGAAGTCTGAGATATGACTTTTGTTAATGTTCGTCAACGAAGATA
TGGGATCTTAGTGGCCTTTTCCTCTTTTGACTTTATAATAGTAACTTGGT
ATTATCTATTTTGTAACGTCATTGCAGTAACATAAATTCGACAAGTTTTG
TAATCTTGAATCTTCAAATAAATTATCGCCTTATATTAGTTGTGATTAGT
TGTGAAGGTTAAATATTAGTTTTGCTTGCTTCTGGTCAAAGTCATACAGA
CAATATACAATAGGGTGCGTTAACGATTACTTTCTGTCTGTTAAGGTGTC
GTCGGAGATTGGAAGAACCACTTCTCGGCCGAAGAGAGCGCCAAGTTTGA
CCAGAAGTATCGTGAGCGGATGGCCGGATCTGGGCTGGAGTTCGAGTTTG
AGTAG Coding sequence (CDS) from alignment at Sc0000039:2218336..2221390- >transcript:BL95428_evm1 ID=transcript:BL95428_evm1|Name=transcript:BL95428_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4590bp|location=Sequence derived from alignment at Sc0000039:2218336..2221390- (Branchiostoma lanceolatum)
ATGAAGACTTTTGAGATACGTGACGATGATGTGGTGATACTAAGCTCTCT
CAAAAGCGGTACAAACTGGATGTTGGAAATTGTGTCTAACGTTCTTGGTG
GAAAGAATGAAAGCGCATCGCCAGCAGGACCCGAGTTTTCAGAGCTCGAG
CTTTGGCCTACAAAGAAACGGCCCTACTACATCGAGCTGCGAGAGAGGCC
ATCTCCTCGGCTGATGATAACCCATCTGCCATTCCAACTGGCACCGCCAG
GCCTGGCAGCTCCAACTACCAAGGTGAAAGTCATTGTCATCATGCGGAAC
CCCAAGGATGTCTGTGTGTCGTTCTACTACTACCTGCAGAAAACTCTGCA
TCTAAAGACTCCAGAATCTTGGGAACAGCACAATAAAGACTTCCTAGATG
GAAAAGTCATCTTTGGTGACTACTTTGACCACGTTCTTGGCTGGTGGCAA
ATGAAAGATGACCCCCACTTCCTCTTTATGAAGTACGAAGATCTGAAAAA
GGATTTTCGCTCTTCAGTGAAGACTATAGCAGCCTTCCTGGAGAAAGAAC
TGACCGATGAAGATCTTGATCGTGTGCTGACCAGTTACAGTGTAGAGTCA
ATGAGAAAGACGTTGGCTAAATCTAACGGGTGGAGAAAGAACATCGTCAG
GAAAGGTGTCGTCGGAGATTGGAAGAACCACTTCTCGGCCGAAGAGAGCG
CCAAGTTTGACCAGAAGTATCGTGAGCGGATGGCCGGATCTGGGCTGGAG
TTCGAGTTTGAGTAGATGAAGACTTTTGAGATACGTGACGATGATGTGGT
GATACTAAGCTCTCTCAAAAGCGGTACAAACTGGATGTTGGAAATTGTGT
CTAACGTTCTTGGTGGAAAGAATGAAAGCGCATCGCCAGCAGGACCCGAG
TTTTCAGAGCTCGAGCTTTGGCCTACAAAGAAACGGCCCTACTACATCGA
GCTGCGAGAGAGGCCATCTCCTCGGCTGATGATAACCCATCTGCCATTCC
AACTGGCACCGCCAGGCCTGGCAGCTCCAACTACCAAGGTGAAAGTCATT
GTCATCATGCGGAACCCCAAGGATGTCTGTGTGTCGTTCTACTACTACCT
GCAGAAAACTCTGCATCTAAAGACTCCAGAATCTTGGGAACAGCACAATA
AAGACTTCCTAGATGGAAAAGTCATCTTTGGTGACTACTTTGACCACGTT
CTTGGCTGGTGGCAAATGAAAGATGACCCCCACTTCCTCTTTATGAAGTA
CGAAGATCTGAAAAAGGATTTTCGCTCTTCAGTGAAGACTATAGCAGCCT
TCCTGGAGAAAGAACTGACCGATGAAGATCTTGATCGTGTGCTGACCAGT
TACAGTGTAGAGTCAATGAGAAAGACGTTGGCTAAATCTAACGGGTGGAG
AAAGAACATCGTCAGGAAAGGTGTCGTCGGAGATTGGAAGAACCACTTCT
CGGCCGAAGAGAGCGCCAAGTTTGACCAGAAGTATCGTGAGCGGATGGCC
GGATCTGGGCTGGAGTTCGAGTTTGAGTAGATGAAGACTTTTGAGATACG
TGACGATGATGTGGTGATACTAAGCTCTCTCAAAAGCGGTACAAACTGGA
TGTTGGAAATTGTGTCTAACGTTCTTGGTGGAAAGAATGAAAGCGCATCG
CCAGCAGGACCCGAGTTTTCAGAGCTCGAGCTTTGGCCTACAAAGAAACG
GCCCTACTACATCGAGCTGCGAGAGAGGCCATCTCCTCGGCTGATGATAA
CCCATCTGCCATTCCAACTGGCACCGCCAGGCCTGGCAGCTCCAACTACC
AAGGTGAAAGTCATTGTCATCATGCGGAACCCCAAGGATGTCTGTGTGTC
GTTCTACTACTACCTGCAGAAAACTCTGCATCTAAAGACTCCAGAATCTT
GGGAACAGCACAATAAAGACTTCCTAGATGGAAAAGTCATCTTTGGTGAC
TACTTTGACCACGTTCTTGGCTGGTGGCAAATGAAAGATGACCCCCACTT
CCTCTTTATGAAGTACGAAGATCTGAAAAAGGATTTTCGCTCTTCAGTGA
AGACTATAGCAGCCTTCCTGGAGAAAGAACTGACCGATGAAGATCTTGAT
CGTGTGCTGACCAGTTACAGTGTAGAGTCAATGAGAAAGACGTTGGCTAA
ATCTAACGGGTGGAGAAAGAACATCGTCAGGAAAGGTGTCGTCGGAGATT
GGAAGAACCACTTCTCGGCCGAAGAGAGCGCCAAGTTTGACCAGAAGTAT
CGTGAGCGGATGGCCGGATCTGGGCTGGAGTTCGAGTTTGAGTAGATGAA
GACTTTTGAGATACGTGACGATGATGTGGTGATACTAAGCTCTCTCAAAA
GCGGTACAAACTGGATGTTGGAAATTGTGTCTAACGTTCTTGGTGGAAAG
AATGAAAGCGCATCGCCAGCAGGACCCGAGTTTTCAGAGCTCGAGCTTTG
GCCTACAAAGAAACGGCCCTACTACATCGAGCTGCGAGAGAGGCCATCTC
CTCGGCTGATGATAACCCATCTGCCATTCCAACTGGCACCGCCAGGCCTG
GCAGCTCCAACTACCAAGGTGAAAGTCATTGTCATCATGCGGAACCCCAA
GGATGTCTGTGTGTCGTTCTACTACTACCTGCAGAAAACTCTGCATCTAA
AGACTCCAGAATCTTGGGAACAGCACAATAAAGACTTCCTAGATGGAAAA
GTCATCTTTGGTGACTACTTTGACCACGTTCTTGGCTGGTGGCAAATGAA
AGATGACCCCCACTTCCTCTTTATGAAGTACGAAGATCTGAAAAAGGATT
TTCGCTCTTCAGTGAAGACTATAGCAGCCTTCCTGGAGAAAGAACTGACC
GATGAAGATCTTGATCGTGTGCTGACCAGTTACAGTGTAGAGTCAATGAG
AAAGACGTTGGCTAAATCTAACGGGTGGAGAAAGAACATCGTCAGGAAAG
GTGTCGTCGGAGATTGGAAGAACCACTTCTCGGCCGAAGAGAGCGCCAAG
TTTGACCAGAAGTATCGTGAGCGGATGGCCGGATCTGGGCTGGAGTTCGA
GTTTGAGTAGATGAAGACTTTTGAGATACGTGACGATGATGTGGTGATAC
TAAGCTCTCTCAAAAGCGGTACAAACTGGATGTTGGAAATTGTGTCTAAC
GTTCTTGGTGGAAAGAATGAAAGCGCATCGCCAGCAGGACCCGAGTTTTC
AGAGCTCGAGCTTTGGCCTACAAAGAAACGGCCCTACTACATCGAGCTGC
GAGAGAGGCCATCTCCTCGGCTGATGATAACCCATCTGCCATTCCAACTG
GCACCGCCAGGCCTGGCAGCTCCAACTACCAAGGTGAAAGTCATTGTCAT
CATGCGGAACCCCAAGGATGTCTGTGTGTCGTTCTACTACTACCTGCAGA
AAACTCTGCATCTAAAGACTCCAGAATCTTGGGAACAGCACAATAAAGAC
TTCCTAGATGGAAAAGTCATCTTTGGTGACTACTTTGACCACGTTCTTGG
CTGGTGGCAAATGAAAGATGACCCCCACTTCCTCTTTATGAAGTACGAAG
ATCTGAAAAAGGATTTTCGCTCTTCAGTGAAGACTATAGCAGCCTTCCTG
GAGAAAGAACTGACCGATGAAGATCTTGATCGTGTGCTGACCAGTTACAG
TGTAGAGTCAATGAGAAAGACGTTGGCTAAATCTAACGGGTGGAGAAAGA
ACATCGTCAGGAAAGGTGTCGTCGGAGATTGGAAGAACCACTTCTCGGCC
GAAGAGAGCGCCAAGTTTGACCAGAAGTATCGTGAGCGGATGGCCGGATC
TGGGCTGGAGTTCGAGTTTGAGTAGATGAAGACTTTTGAGATACGTGACG
ATGATGTGGTGATACTAAGCTCTCTCAAAAGCGGTACAAACTGGATGTTG
GAAATTGTGTCTAACGTTCTTGGTGGAAAGAATGAAAGCGCATCGCCAGC
AGGACCCGAGTTTTCAGAGCTCGAGCTTTGGCCTACAAAGAAACGGCCCT
ACTACATCGAGCTGCGAGAGAGGCCATCTCCTCGGCTGATGATAACCCAT
CTGCCATTCCAACTGGCACCGCCAGGCCTGGCAGCTCCAACTACCAAGGT
GAAAGTCATTGTCATCATGCGGAACCCCAAGGATGTCTGTGTGTCGTTCT
ACTACTACCTGCAGAAAACTCTGCATCTAAAGACTCCAGAATCTTGGGAA
CAGCACAATAAAGACTTCCTAGATGGAAAAGTCATCTTTGGTGACTACTT
TGACCACGTTCTTGGCTGGTGGCAAATGAAAGATGACCCCCACTTCCTCT
TTATGAAGTACGAAGATCTGAAAAAGGATTTTCGCTCTTCAGTGAAGACT
ATAGCAGCCTTCCTGGAGAAAGAACTGACCGATGAAGATCTTGATCGTGT
GCTGACCAGTTACAGTGTAGAGTCAATGAGAAAGACGTTGGCTAAATCTA
ACGGGTGGAGAAAGAACATCGTCAGGAAAGGTGTCGTCGGAGATTGGAAG
AACCACTTCTCGGCCGAAGAGAGCGCCAAGTTTGACCAGAAGTATCGTGA
GCGGATGGCCGGATCTGGGCTGGAGTTCGAGTTTGAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000039 | genome | Sc0000039:2218336..2221390 - |
Properties
| Property Name | Value |
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| Transcript id | BL95428_evm1 |
| Biotype | protein_coding |
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