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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95399_evm1 >transcript:BL95399_evm1-protein ID=transcript:BL95399_evm1-protein|Name=transcript:BL95399_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=244bp
MVLNGLFIENLEEERLATVERDNRILLEKMSHIMRTRGRVDNRNEYEHHS LNREKRQRELMRITKENQEILKRIMKREPEYDHAKWQRDWEKNEQFMDNI ARYPKGWYDEWKSEEDKKRSASRLSSGKKSGRKSQGVPLFVLQQDFTPPS LADLASPQAELAMCLAELAKCLAELAKCLAELAKCLAELAITKISRDIPP VYETLVGTDPKEEEPNKIREKGEYPISSRRQKRRCRPIGGCKTD Run BLAST on NCBI mRNA from alignment at Sc0000036:2238757..2244044+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95399_evm1 ID=transcript:BL95399_evm1|Name=transcript:BL95399_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5288bp|location=Sequence derived from alignment at Sc0000036:2238757..2244044+ (Branchiostoma lanceolatum) ATGGTTTTGAATGGGCTTTTCATTGAGAATGTGAGGAGTCTTGTCAGAAA
AGAGTCCTTACACAGCATTGTGTCATTTTTCAAATGAAAGAAGTGAACAG
TGTTTCAAACAAATGCTCTTCCCTTTCTTGAAAAATTACTTTACAAAAAT
TCTTAACTCGTGGACAAAATTTTTTTCTTAGGCAAAGAAATCTTTCTTCT
TTTTGAGAAATTTTTATTTGTATAAGAAGAAACAAAAAAACAAGAAAAGA
TATTTTTGGTAGTGTATATGTGCTACATGTAGTTACAAAATGTATCTTCC
CATGAAGTAAGTTCGGTTTATTTCCAACATGTGATTAACCATCGTTATTC
CTTCCTTTTTTTTCTCAGCTTGAGGAGGAGAGACTGGCGACCGTTGAGAG
AGACAACCGTATCCTGCTGGAGAAGATGTCGCACATCATGCGCACACGGG
GCCGCGTGGACAACCGGAACGAATACGAGCACCACAGGTCAGGGGTCAAG
AACCGACGGGCTTTCAGCTAGTCGCTATTTTTGTCGTCCAACTCTTGTAT
CAAGTAGTTACTTAGTGTTACTCCCGTTGTCCAGTCTGGTACAGGAGTGT
ACTTACTTATTTTACTTAATACTTACTTTAGTTTCTTACTGTACTTACTT
ACTTTAATTTTGGAGTGTACTTTAGGAGACAAAAGGAAATGGGGTCTCCA
ATGTTCATGAACATATCAAGTTAACTGTAGGGACGCACAAGCAGGGGCAC
TTAAGAACGGAGCATCATTTTACAGGACTGAACATTCTATGGCCTGTTCC
ACTGGCCTTTATGCTAAGAAGTATGAAATGAAGAATGCATAAATATATAT
CAATACGTAATCTGATGTGTACCTTTGTTTTAAACAGAAGGGGTGTAGAA
TTCTGTAAATGGCATAGTAGAAAAGTTACTCAAGCAAGTGGATGAATATT
GTAACTGGATGGATATGCACAATATCCATCCAGATGCTTGAGTTACTTTT
GTACTGTGTGTCTCATTACCTGGATGTCTACCTTCCTAGATGTAAAAATA
GCAATGTCTGGATCAGAGCTGTCTCCAGCTTTGATTTTTTTTCCATCCCA
CTCAATGTTTTGAAGCCCACGTTGGTAATTTCTGTTGTTTAATCGTCATC
TTAAGCTCACAAAAATGTTTTCTCCAATTTCATGTCATGAAGATCAGATT
TTTTTGATGGACAGGATGAGATTTTTTTCTGGTCCAATAAGCAAATTTCC
ATCTCGTGACATAGGGACAGGTCCTGGTCTAGATGCTGAAACATGTATTA
TCAAATTAGTACACTGATGAAAACTGACTGATGTTTTTTCCCCTCAGTCT
GAACCGCGAGAAGCGACAGCGGGAGTTGATGCGTATCACCAAGGAGAACC
AGGAGATCCTGAAGCGAATCATGAAGCGTGAGCCGGAGTACGACCATGCC
AAGTGGCAGCGCGACTGGGAGAAGAACGAACAATTCATGGACAACATTGC
GCGCTACCCGAAAGGCTGGTACGACGAATGGAAGAGCGAGGAAGATAAGA
AAAGGGTAAGTAGAGGGACGGCATTCCTAGGAAAGGCAAGACGCCTATCA
GAGAAAACATGAAGGGGTGCAAGTAACCTCCATTAACATCAATCCGCCAG
GTTACATAGATCCGCCACTTTGAAAATAAGATTGTATTTGAGAGATCTCT
ACTGCAGCGTCCCCCAGGTATGCACAGTTGAGATATACAGGAGTGTATTA
TACTGGGGGACGTGGGTTGGAGATCTGTTTGGACGTATCCTTTCATGCTG
GCGGAATTATGTACCCCGGTGGAAATCATGTTAGTGGATGTCACAAGTAG
ATTTTGCTACCTATGTCTATACAATTAGAAACTGCTGTTTCTGCCAAATA
TTGCAACATTGGTAGGCTCAGTGTTGCTGGGATAATTGTGATTGGCAGGT
TGAAAATGAAAATCAAACCTGATTGGTTAATCACACCAATTCAGCACCAA
GGAGAGTACTGATTGGTCAGATCAGCACCAAGGAAAACTCAAGCACAACA
GACAAGATGACAAACCTTTTTGGATAACTTCCAGTCGTTTTATCCCAAAA
TAGACTTCATCTGAAATAATGTGTATAAAACGATAACTTAGCCAACACAC
CAAATGAATAATCAAATCATAAAATTTATCATAATTCCAAATGTAAAGAA
AAGAACATACTAATGTCCTACCCTTACATTTGCATGCAGTCTGCGTCAAG
ATTGAGCAGTGGTAAAAAATCAGGTCGCAAATCCCAGGTACAGTCAGGAA
CATTTAAAAACCTCCCACTTAATTAGGCATATCTACACAATTTTTTTTCA
CAATAATCAATGCTCACTAGCTAGCACTACCGTCAATGATTATAATCATT
TTCATCTTCTAAAAATATGGTGAAGACATGCTCTGATTGTAAAGGAAGAA
AAATTATAAAATTTCCCCCACTCTTTTCTCATTTCTTTATGTATGGTGCA
TGAATTGATGCATAACTAATGTTTGAAAATTAACAACACAATGTCAAACC
TGATAATAGAAATGTAGACATGGTGACGTAGTAATTTAAATTTATCCCTT
TCTATCGATGTCTAAATATCTCTAGACTTGAGCTTGTACTTGATGTTTCT
GTCCTATAATTACTGTACTACCTGATACTAATGTCTCTAACCTCCCTGTA
AAGGGTGTTCCTCTCTTTGTGCTTCAACAGGACTTTACTCCGGTGAGTGT
GTTGTACCAAACGTGACGTCATCTTGTTTCCTTACCCTGTAACCATCTCC
TCTTCAAGACCTAGCTTACAGTGTCTGTTTGGGAATTATGAAAACATAGC
AAGGGTCTCAAAATTGCTCTCTTAGGCCACACCATTTTAATTTCTTGGTT
AACTGAATTTTTAAAAAAATGCTAGATTGGAAAATCAACAGGAAAACAGA
ATCTCAGAGGAAACTTTGTACTTTGGTGTACACAATTTCAGGGAGTGAAC
AGGATCAGGTGCAAGTTTTCGCCCCAGCCTTCCGTTTTCATGATTTGTTT
TTGGCTAAAATTTATCTAAAAAATCCATTAACCAAGAAATTAAATTGGTG
TGACCTTAGGCCTCACCAATTTATTTTCTTGGTTTTCTGACCTTTTGAAG
TAAGAATTTAGCAAGCAGTCAAGATGAAAACAAAAAGCTGGGAGGAAAAC
TTGAATCTTACTACATTGTATGTTCACTCCCTGAAGCTGTGAATATCAAG
ATACAGCTGTCAGGTTCTGTTTTTAAGTTAATGTTTCAATTTAGCATTAT
TTTTTGGTAAATTCGAGAGCCAAGAAATAAAATTGGTGTGGCCTTATCTA
TTGATCACACACATAAGTTCACAAATTTCACAAATCTCTTTGCTGTCATT
GGGAAAATGCACTAAAAACTAAATTATCAAACATTATCATTATCAAAAAC
CTAAATTATCAAACATACAAAATGGTTTCATACTATAAGGTAGACTGCAA
ATACTTCATATCTGTTACGTCCATTAATATGTTAAATCACAGAATCTGAT
GTAAAACTTGCCAATATAAGCAATGCGAATACCCTGGTCCATTGAACTAT
GTGTAGATTAGCACTTCCTTGTACCTTGGTTAATAATTGACATTTAGTGG
AACATCTTTTGCATGCAGCGAGCCAAGCCTGGCCGATCTAGCCAGTCCCC
AAGCAGAACTAGCCATGTGTCTGGCAGAGCTAGCCAAGTGTCTGGCAGAA
CTAGCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAGCTAGCCAT
AAGTCTGACAGGCTTAGCCAGTACTCGGGGAGATCTAGCAGGCTATCCGG
CAGGTCTAGCGCCATGTCTTGCCAGTCCTCTGCTAGCCTGTCCCGTCGCT
CCCCAGGAAAAGGGCCCTCACGTCAGGTATACAGACAGGCTTGTAGGATA
GGCAGACAGCCCTCATGTAAAAAATGCTTAGCATAAGATTTAGAGTAGTT
CTTTCTTAATGCACATGAATCAGTCCACAGTTATAGCACATGGCATTAGA
TTTAGAGAAGTAGAGAAAATAAGCACAGTAAACATATAAAGCTAAAAAGC
ACTTTTAATAAGATTTAAGAGTTAGCTGTTTTTAAAAATGCACACAAGTC
AGCCCACAATTATAGCTGCAGTAGGCCTATGGCATTAGATTTAGAGTAGT
TGTAAACACATCTAAAGAGAAGAATGTAGATTAATGAGAGTAAATATTGA
CAGCATGTAGATCAACGCTGACTAAATGCTTATTGAACTGCCAATAAAGT
AAAGGATACAAACGACTAGACTGTCAAAATGTGATTTTCTCATCCCCCTT
TGTTTTACAGTACAAATGGAACTAAGTCAGTCCAACATAGCTGCTAACGC
CAGGTATGAGAACTGATATACTTGGTGCCAGCCGATATGTTCAACTGGCT
TGTCTTCCATCACCCAACTTTGTACTTGTAACTTTCCCAATATTTGTGAA
TACAGGGCTGACCTCAAAGTTATGGCTGCCCATAGGAAAGCATGTTAAGA
TTCACTGAAACAAGGCTTCATAAAAGTACTAACCCAAACTTCAATCTTAA
GAATTCGTCTACACTGGAAATTCACAAGGGTTTAGTTGATAACCATGCAA
AGAAAACAGAGGGTTGCGCAGCTCAAACTCCGAAGAAAGCTGCCAGTTTC
AAGGAAACCCTACCTTTGACCCCAGATTTCTGATGTATCCCTCCGCATGA
CCCAACAACTCACATCTATCCTTACGCCAACTAAAATGGCAAACTAAACA
GATTTCAACCAAAATGGGAATACTAAGACACTACCTGTTCCCTCTAACCA
AAAAAGTCTTCAGATTGGGCAAAAAATTTCAAGGAAAAGAAAGGCTTATA
AGATTTAAAGTAAGGACTATAAAGGTATTCAAATGTTTTGTACTCTACGG
TGCAATGCAACTTTGGGGTCAACCCTGAACCCAAAAAATGGCAAATGTTA
CAAGGCCACAAAGTTGGGTGAGATCAGTTACACTATGAAAGGCAAAGCAG
CAATGGTCAACACAGAAGATGATATGTTTGTTCTGAGATGTATTGTCTCC
ACAATAACGAACATTTTCTCATTACAGCAAAAATCTCGCGAGACATCCCG
CCAGTCTACGAGACGCTCGTCGGAACAGACCCCAAGGAAGAAGAGCCGAA
CAAAATCAGAGAGAAAGGAGAGTACCCAATCAGCAGCAGAAGACAGAAAA
GAAGATGCCGACCAATCGGAGGATGCAAAACAGACTGA Coding sequence (CDS) from alignment at Sc0000036:2238757..2244044+ >transcript:BL95399_evm1 ID=transcript:BL95399_evm1|Name=transcript:BL95399_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5145bp|location=Sequence derived from alignment at Sc0000036:2238757..2244044+ (Branchiostoma lanceolatum) ATGGTTTTGAATGGGCTTTTCATTGAGAATCTTGAGGAGGAGAGACTGGC GACCGTTGAGAGAGACAACCGTATCCTGCTGGAGAAGATGTCGCACATCA TGCGCACACGGGGCCGCGTGGACAACCGGAACGAATACGAGCACCACAGT CTGAACCGCGAGAAGCGACAGCGGGAGTTGATGCGTATCACCAAGGAGAA CCAGGAGATCCTGAAGCGAATCATGAAGCGTGAGCCGGAGTACGACCATG CCAAGTGGCAGCGCGACTGGGAGAAGAACGAACAATTCATGGACAACATT GCGCGCTACCCGAAAGGCTGGTACGACGAATGGAAGAGCGAGGAAGATAA GAAAAGGTCTGCGTCAAGATTGAGCAGTGGTAAAAAATCAGGTCGCAAAT CCCAGGGTGTTCCTCTCTTTGTGCTTCAACAGGACTTTACTCCGCCAAGC CTGGCCGATCTAGCCAGTCCCCAAGCAGAACTAGCCATGTGTCTGGCAGA GCTAGCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAACTAGCCA AGTGTCTGGCAGAGCTAGCCATAACAAAAATCTCGCGAGACATCCCGCCA GTCTACGAGACGCTCGTCGGAACAGACCCCAAGGAAGAAGAGCCGAACAA AATCAGAGAGAAAGGAGAGTACCCAATCAGCAGCAGAAGACAGAAAAGAA GATGCCGACCAATCGGAGGATGCAAAACAGACTGAATGGTTTTGAATGGG CTTTTCATTGAGAATCTTGAGGAGGAGAGACTGGCGACCGTTGAGAGAGA CAACCGTATCCTGCTGGAGAAGATGTCGCACATCATGCGCACACGGGGCC GCGTGGACAACCGGAACGAATACGAGCACCACAGTCTGAACCGCGAGAAG CGACAGCGGGAGTTGATGCGTATCACCAAGGAGAACCAGGAGATCCTGAA GCGAATCATGAAGCGTGAGCCGGAGTACGACCATGCCAAGTGGCAGCGCG ACTGGGAGAAGAACGAACAATTCATGGACAACATTGCGCGCTACCCGAAA GGCTGGTACGACGAATGGAAGAGCGAGGAAGATAAGAAAAGGTCTGCGTC AAGATTGAGCAGTGGTAAAAAATCAGGTCGCAAATCCCAGGGTGTTCCTC TCTTTGTGCTTCAACAGGACTTTACTCCGCCAAGCCTGGCCGATCTAGCC AGTCCCCAAGCAGAACTAGCCATGTGTCTGGCAGAGCTAGCCAAGTGTCT GGCAGAACTAGCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAGC TAGCCATAACAAAAATCTCGCGAGACATCCCGCCAGTCTACGAGACGCTC GTCGGAACAGACCCCAAGGAAGAAGAGCCGAACAAAATCAGAGAGAAAGG AGAGTACCCAATCAGCAGCAGAAGACAGAAAAGAAGATGCCGACCAATCG GAGGATGCAAAACAGACTGAATGGTTTTGAATGGGCTTTTCATTGAGAAT CTTGAGGAGGAGAGACTGGCGACCGTTGAGAGAGACAACCGTATCCTGCT GGAGAAGATGTCGCACATCATGCGCACACGGGGCCGCGTGGACAACCGGA ACGAATACGAGCACCACAGTCTGAACCGCGAGAAGCGACAGCGGGAGTTG ATGCGTATCACCAAGGAGAACCAGGAGATCCTGAAGCGAATCATGAAGCG TGAGCCGGAGTACGACCATGCCAAGTGGCAGCGCGACTGGGAGAAGAACG AACAATTCATGGACAACATTGCGCGCTACCCGAAAGGCTGGTACGACGAA TGGAAGAGCGAGGAAGATAAGAAAAGGTCTGCGTCAAGATTGAGCAGTGG TAAAAAATCAGGTCGCAAATCCCAGGGTGTTCCTCTCTTTGTGCTTCAAC AGGACTTTACTCCGCCAAGCCTGGCCGATCTAGCCAGTCCCCAAGCAGAA CTAGCCATGTGTCTGGCAGAGCTAGCCAAGTGTCTGGCAGAACTAGCCAA GTGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAGCTAGCCATAACAAAAA TCTCGCGAGACATCCCGCCAGTCTACGAGACGCTCGTCGGAACAGACCCC AAGGAAGAAGAGCCGAACAAAATCAGAGAGAAAGGAGAGTACCCAATCAG CAGCAGAAGACAGAAAAGAAGATGCCGACCAATCGGAGGATGCAAAACAG ACTGAATGGTTTTGAATGGGCTTTTCATTGAGAATCTTGAGGAGGAGAGA CTGGCGACCGTTGAGAGAGACAACCGTATCCTGCTGGAGAAGATGTCGCA CATCATGCGCACACGGGGCCGCGTGGACAACCGGAACGAATACGAGCACC ACAGTCTGAACCGCGAGAAGCGACAGCGGGAGTTGATGCGTATCACCAAG GAGAACCAGGAGATCCTGAAGCGAATCATGAAGCGTGAGCCGGAGTACGA CCATGCCAAGTGGCAGCGCGACTGGGAGAAGAACGAACAATTCATGGACA ACATTGCGCGCTACCCGAAAGGCTGGTACGACGAATGGAAGAGCGAGGAA GATAAGAAAAGGTCTGCGTCAAGATTGAGCAGTGGTAAAAAATCAGGTCG CAAATCCCAGGGTGTTCCTCTCTTTGTGCTTCAACAGGACTTTACTCCGC CAAGCCTGGCCGATCTAGCCAGTCCCCAAGCAGAACTAGCCATGTGTCTG GCAGAGCTAGCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAACT AGCCAAGTGTCTGGCAGAGCTAGCCATAACAAAAATCTCGCGAGACATCC CGCCAGTCTACGAGACGCTCGTCGGAACAGACCCCAAGGAAGAAGAGCCG AACAAAATCAGAGAGAAAGGAGAGTACCCAATCAGCAGCAGAAGACAGAA AAGAAGATGCCGACCAATCGGAGGATGCAAAACAGACTGAATGGTTTTGA ATGGGCTTTTCATTGAGAATCTTGAGGAGGAGAGACTGGCGACCGTTGAG AGAGACAACCGTATCCTGCTGGAGAAGATGTCGCACATCATGCGCACACG GGGCCGCGTGGACAACCGGAACGAATACGAGCACCACAGTCTGAACCGCG AGAAGCGACAGCGGGAGTTGATGCGTATCACCAAGGAGAACCAGGAGATC CTGAAGCGAATCATGAAGCGTGAGCCGGAGTACGACCATGCCAAGTGGCA GCGCGACTGGGAGAAGAACGAACAATTCATGGACAACATTGCGCGCTACC CGAAAGGCTGGTACGACGAATGGAAGAGCGAGGAAGATAAGAAAAGGTCT GCGTCAAGATTGAGCAGTGGTAAAAAATCAGGTCGCAAATCCCAGGGTGT TCCTCTCTTTGTGCTTCAACAGGACTTTACTCCGCCAAGCCTGGCCGATC TAGCCAGTCCCCAAGCAGAACTAGCCATGTGTCTGGCAGAGCTAGCCAAG TGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGC AGAGCTAGCCATAACAAAAATCTCGCGAGACATCCCGCCAGTCTACGAGA CGCTCGTCGGAACAGACCCCAAGGAAGAAGAGCCGAACAAAATCAGAGAG AAAGGAGAGTACCCAATCAGCAGCAGAAGACAGAAAAGAAGATGCCGACC AATCGGAGGATGCAAAACAGACTGAATGGTTTTGAATGGGCTTTTCATTG AGAATCTTGAGGAGGAGAGACTGGCGACCGTTGAGAGAGACAACCGTATC CTGCTGGAGAAGATGTCGCACATCATGCGCACACGGGGCCGCGTGGACAA CCGGAACGAATACGAGCACCACAGTCTGAACCGCGAGAAGCGACAGCGGG AGTTGATGCGTATCACCAAGGAGAACCAGGAGATCCTGAAGCGAATCATG AAGCGTGAGCCGGAGTACGACCATGCCAAGTGGCAGCGCGACTGGGAGAA GAACGAACAATTCATGGACAACATTGCGCGCTACCCGAAAGGCTGGTACG ACGAATGGAAGAGCGAGGAAGATAAGAAAAGGTCTGCGTCAAGATTGAGC AGTGGTAAAAAATCAGGTCGCAAATCCCAGGGTGTTCCTCTCTTTGTGCT TCAACAGGACTTTACTCCGCCAAGCCTGGCCGATCTAGCCAGTCCCCAAG CAGAACTAGCCATGTGTCTGGCAGAGCTAGCCAAGTGTCTGGCAGAACTA GCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGCAGAGCTAGCCATAAC AAAAATCTCGCGAGACATCCCGCCAGTCTACGAGACGCTCGTCGGAACAG ACCCCAAGGAAGAAGAGCCGAACAAAATCAGAGAGAAAGGAGAGTACCCA ATCAGCAGCAGAAGACAGAAAAGAAGATGCCGACCAATCGGAGGATGCAA AACAGACTGAATGGTTTTGAATGGGCTTTTCATTGAGAATCTTGAGGAGG AGAGACTGGCGACCGTTGAGAGAGACAACCGTATCCTGCTGGAGAAGATG TCGCACATCATGCGCACACGGGGCCGCGTGGACAACCGGAACGAATACGA GCACCACAGTCTGAACCGCGAGAAGCGACAGCGGGAGTTGATGCGTATCA CCAAGGAGAACCAGGAGATCCTGAAGCGAATCATGAAGCGTGAGCCGGAG TACGACCATGCCAAGTGGCAGCGCGACTGGGAGAAGAACGAACAATTCAT GGACAACATTGCGCGCTACCCGAAAGGCTGGTACGACGAATGGAAGAGCG AGGAAGATAAGAAAAGGTCTGCGTCAAGATTGAGCAGTGGTAAAAAATCA GGTCGCAAATCCCAGGGTGTTCCTCTCTTTGTGCTTCAACAGGACTTTAC TCCGCCAAGCCTGGCCGATCTAGCCAGTCCCCAAGCAGAACTAGCCATGT GTCTGGCAGAGCTAGCCAAGTGTCTGGCAGAACTAGCCAAGTGTCTGGCA GAACTAGCCAAGTGTCTGGCAGAGCTAGCCATAACAAAAATCTCGCGAGA CATCCCGCCAGTCTACGAGACGCTCGTCGGAACAGACCCCAAGGAAGAAG AGCCGAACAAAATCAGAGAGAAAGGAGAGTACCCAATCAGCAGCAGAAGA CAGAAAAGAAGATGCCGACCAATCGGAGGATGCAAAACAGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| Sc0000036 | genome | Sc0000036:2238757..2244044 + |
Properties
| Property Name | Value |
| Transcript id | BL95399_evm1 |
| Biotype | protein_coding |
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