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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95320_evm0 >transcript:BL95320_evm0-protein ID=transcript:BL95320_evm0-protein|Name=transcript:BL95320_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=469bp
MNTLLLPYYSTTKPRKKPTPRLFVEKSTSKKGHAEKSTVANDESVASSSY
PTESSFQDHDYVVPEAAMSVPDLRPLSLSPHITLASDPPSLGFTKDVALA
LDPQPLGLSPVMTPDPRPLGLSQDVTLAPDPQPPGLSQDMTLAPDPRPLG
LSKDVTLAVLPRLYMEEVVSELGRRNISTGDVNNKELLVAVLRVVMEKEY
SGTGVVFEKANIVVSKPGQGKAMSATLCGQAREKQRPEPRRQPNHRILMY
QTDPNSGQPLPLQSYNDGRPLQPTQRLSNNAPPLPQQQHLNNNGSPLPQH
LHPNNNGQPQPLRLHLNNNRPPLPQHLYLPNSAPPPSQHLHLSNNGPPLP
QHLHLNNNGQPLHLHLNNNGSPLLQQQHLSNNGPPLPQHLHMNNNESPLP
QHRYLPNNAPPPSQRLHLNNNGSPSPQHKWNNPLCQNWTTLLMEVPGHPL
TQRSQAWSRVSRLHRLKLR Run BLAST on NCBI mRNA from alignment at Sc0000021:2196401..2198666+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95320_evm0 ID=transcript:BL95320_evm0|Name=transcript:BL95320_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2266bp|location=Sequence derived from alignment at Sc0000021:2196401..2198666+ (Branchiostoma lanceolatum)
ATGAATACCCTGTTGCTCCCTTACTACAGTACAACAAAACCCAGGAAGAA
GCCTACTCCTCGCCTATTCGTAGAGAAGAGTACTTCCAAAAAGGGGCATG
CAGAGAAGAGCACAGTAGCAAACGATGAGTCAGTTGCCAGCAGCAGCTAC
CCTACAGAGAGTTCATTCCAAGACCATGACTATGTTGTTCCAGGTAAGAC
AGTTTAGAGCAATATGGTAACGGATATTTTATAGAAACGTTTAATATATA
AGTTGAGTTGGTAATGTTTTGAAACGAGTGAGGCTTGAAAATTTGTACGG
AGATTTTGCCGCCTTTCGAAAATTTAGTTGTTTTGATGTCCTAGATTATG
TGATAATGGTCTGAAAAGGGTCTGAGTTAGCGTAACGGGGTAAGTCATTA
CCTAAAAATAGAAAATGATAACGTTACTCAGAACTTTGGCACAAAGAAGC
TGAAAAAGAATTCTTTTTTGCACAATCAAAGAAGTTTTATTAACTCCCGT
ACATACATAGAAGCAAAATTGTATCATATTTAACCTCCATTTAGGAAAAT
ACAGCAAAAATAATGGGAGTAAAATGATGTAATATTTTCACACGACTTCA
ATTCTTCCTGGGCTGTCCTCATATTATTCTTTATTTCCCTTCCAGAAGCA
GCCATGTCTGTGCCTGACCTTCGACCTCTGAGCCTGTCCCCTCACATAAC
TTTGGCCTCTGACCCCCCATCTCTTGGTTTCACCAAGGATGTGGCCTTAG
CCCTTGACCCTCAACCCCTAGGCTTGTCCCCGGTTATGACTCCTGACCCC
CGACCCCTGGGTCTGTCCCAGGACGTGACTTTGGCCCCTGACCCCCAACC
CCCGGGTCTGTCCCAGGACATGACCTTGGCCCCTGACCCCCGACCTCTGG
GTCTGTCCAAGGATGTGACCTTGGCAGTTCTCCCCAGACTGTACATGGAG
GAAGTGGTGTCTGAACTGGGCAGGAGAAACATCAGCACCGGGGACGTCAA
CAACAAGGAGCTGCTGGTGGCTGTGCTCAGGGTTGTCATGGAGAAGGAAT
ACAGCGGGACGGGAGTGGTGTTCGAAAAGGCGAACATCGTTGTTTCAAAG
CCGGGTCAAGGTATATAAGCCTTGGGATTGAAGTGTCCATAAGGAATACT
TTTGCAATTGAAGATTTGCAAGATGACAACATTTTACTTGCATACTTTTT
CTTTTAATTCTCTTGAATGTGTATTGTTACATTTATTTTTTTGGGGTGTT
GATATACAATGATATGGACTTCGGTATGAGCTCACAAATCTCTGTAATGT
ATTAAACTTTACCTCAGGAAAAGCCATGTCAGCTACGTTGTGTGGACAGG
CACGGGTCAATGCATCAGGACAGAGGCTCGTACCGAGTGCAGGATCTGGT
AAGGCCACAGTCACACAAACTTCATTCTATGGACAATATCGTCCAAAGAT
GACAAAATATAACGTGAGCAGATAGAAATAAACAACAGTAGCCTGTAGTT
CATAGGAACTATGATTTATTTAAGTCTCCCCTTTTATGTCTTTTATGTGT
AGGAAAAGCAACGTCCCGAGCCCAGGCGTCAGCCAAACCATCGCATCCTC
ATGTACCAAACAGACCCCAACAGTGGACAGCCCCTGCCACTGCAATCATA
CAACGATGGGCGACCCCTCCAACCGACCCAGCGCCTGTCCAACAATGCAC
CACCCCTACCACAGCAACAGCACCTGAACAACAATGGATCTCCCCTACCA
CAGCACCTGCACCCAAACAACAATGGACAGCCCCAGCCACTGCGCCTGCA
CTTGAACAACAACAGACCACCACTACCACAGCATCTGTACCTGCCCAACA
GTGCACCACCCCCATCACAGCACCTGCACCTGTCCAACAATGGACCACCC
CTACCACAGCACCTGCACCTGAACAACAATGGACAGCCACTGCACCTGCA
CCTGAACAACAACGGATCACCCCTACTACAGCAACAGCACCTGTCCAACA
ATGGACCACCCCTACCACAGCACCTTCACATGAACAACAACGAATCACCA
CTACCACAGCACCGGTATCTGCCCAACAATGCACCACCCCCATCACAGCG
CCTGCACCTGAACAACAATGGATCACCCTCTCCCCAACACAAGTGGAACA
ATCCGCTATGTCAGAATTGGACAACTTTGCTGATGGAGGTTCCTGGTCAT
CCTCTGACACAGAGGAGCCAGGCATGGTCCAGAGTCTCCAGACTCCACAG
ATTAAAGTTACGGTAA Coding sequence (CDS) from alignment at Sc0000021:2196401..2198666+ >transcript:BL95320_evm0 ID=transcript:BL95320_evm0|Name=transcript:BL95320_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5640bp|location=Sequence derived from alignment at Sc0000021:2196401..2198666+ (Branchiostoma lanceolatum)
ATGAATACCCTGTTGCTCCCTTACTACAGTACAACAAAACCCAGGAAGAA
GCCTACTCCTCGCCTATTCGTAGAGAAGAGTACTTCCAAAAAGGGGCATG
CAGAGAAGAGCACAGTAGCAAACGATGAGTCAGTTGCCAGCAGCAGCTAC
CCTACAGAGAGTTCATTCCAAGACCATGACTATGTTGTTCCAGAAGCAGC
CATGTCTGTGCCTGACCTTCGACCTCTGAGCCTGTCCCCTCACATAACTT
TGGCCTCTGACCCCCCATCTCTTGGTTTCACCAAGGATGTGGCCTTAGCC
CTTGACCCTCAACCCCTAGGCTTGTCCCCGGTTATGACTCCTGACCCCCG
ACCCCTGGGTCTGTCCCAGGACGTGACTTTGGCCCCTGACCCCCAACCCC
CGGGTCTGTCCCAGGACATGACCTTGGCCCCTGACCCCCGACCTCTGGGT
CTGTCCAAGGATGTGACCTTGGCAGTTCTCCCCAGACTGTACATGGAGGA
AGTGGTGTCTGAACTGGGCAGGAGAAACATCAGCACCGGGGACGTCAACA
ACAAGGAGCTGCTGGTGGCTGTGCTCAGGGTTGTCATGGAGAAGGAATAC
AGCGGGACGGGAGTGGTGTTCGAAAAGGCGAACATCGTTGTTTCAAAGCC
GGGTCAAGGAAAAGCCATGTCAGCTACGTTGTGTGGACAGGCACGGGAAA
AGCAACGTCCCGAGCCCAGGCGTCAGCCAAACCATCGCATCCTCATGTAC
CAAACAGACCCCAACAGTGGACAGCCCCTGCCACTGCAATCATACAACGA
TGGGCGACCCCTCCAACCGACCCAGCGCCTGTCCAACAATGCACCACCCC
TACCACAGCAACAGCACCTGAACAACAATGGATCTCCCCTACCACAGCAC
CTGCACCCAAACAACAATGGACAGCCCCAGCCACTGCGCCTGCACTTGAA
CAACAACAGACCACCACTACCACAGCATCTGTACCTGCCCAACAGTGCAC
CACCCCCATCACAGCACCTGCACCTGTCCAACAATGGACCACCCCTACCA
CAGCACCTGCACCTGAACAACAATGGACAGCCACTGCACCTGCACCTGAA
CAACAACGGATCACCCCTACTACAGCAACAGCACCTGTCCAACAATGGAC
CACCCCTACCACAGCACCTTCACATGAACAACAACGAATCACCACTACCA
CAGCACCGGTATCTGCCCAACAATGCACCACCCCCATCACAGCGCCTGCA
CCTGAACAACAATGGATCACCCTCTCCCCAACACAAGTGGAACAATCCGC
TATGTCAGAATTGGACAACTTTGCTGATGGAGGTTCCTGGTCATCCTCTG
ACACAGAGGAGCCAGGCATGGTCCAGAGTCTCCAGACTCCACAGATTAAA
GTTACGGTAAATGAATACCCTGTTGCTCCCTTACTACAGTACAACAAAAC
CCAGGAAGAAGCCTACTCCTCGCCTATTCGTAGAGAAGAGTACTTCCAAA
AAGGGGCATGCAGAGAAGAGCACAGTAGCAAACGATGAGTCAGTTGCCAG
CAGCAGCTACCCTACAGAGAGTTCATTCCAAGACCATGACTATGTTGTTC
CAGAAGCAGCCATGTCTGTGCCTGACCTTCGACCTCTGAGCCTGTCCCCT
CACATAACTTTGGCCTCTGACCCCCCATCTCTTGGTTTCACCAAGGATGT
GGCCTTAGCCCTTGACCCTCAACCCCTAGGCTTGTCCCCGGTTATGACTC
CTGACCCCCGACCCCTGGGTCTGTCCCAGGACGTGACTTTGGCCCCTGAC
CCCCAACCCCCGGGTCTGTCCCAGGACATGACCTTGGCCCCTGACCCCCG
ACCTCTGGGTCTGTCCAAGGATGTGACCTTGGCAGTTCTCCCCAGACTGT
ACATGGAGGAAGTGGTGTCTGAACTGGGCAGGAGAAACATCAGCACCGGG
GACGTCAACAACAAGGAGCTGCTGGTGGCTGTGCTCAGGGTTGTCATGGA
GAAGGAATACAGCGGGACGGGAGTGGTGTTCGAAAAGGCGAACATCGTTG
TTTCAAAGCCGGGTCAAGGAAAAGCCATGTCAGCTACGTTGTGTGGACAG
GCACGGGAAAAGCAACGTCCCGAGCCCAGGCGTCAGCCAAACCATCGCAT
CCTCATGTACCAAACAGACCCCAACAGTGGACAGCCCCTGCCACTGCAAT
CATACAACGATGGGCGACCCCTCCAACCGACCCAGCGCCTGTCCAACAAT
GCACCACCCCTACCACAGCAACAGCACCTGAACAACAATGGATCTCCCCT
ACCACAGCACCTGCACCCAAACAACAATGGACAGCCCCAGCCACTGCGCC
TGCACTTGAACAACAACAGACCACCACTACCACAGCATCTGTACCTGCCC
AACAGTGCACCACCCCCATCACAGCACCTGCACCTGTCCAACAATGGACC
ACCCCTACCACAGCACCTGCACCTGAACAACAATGGACAGCCACTGCACC
TGCACCTGAACAACAACGGATCACCCCTACTACAGCAACAGCACCTGTCC
AACAATGGACCACCCCTACCACAGCACCTTCACATGAACAACAACGAATC
ACCACTACCACAGCACCGGTATCTGCCCAACAATGCACCACCCCCATCAC
AGCGCCTGCACCTGAACAACAATGGATCACCCTCTCCCCAACACAAGTGG
AACAATCCGCTATGTCAGAATTGGACAACTTTGCTGATGGAGGTTCCTGG
TCATCCTCTGACACAGAGGAGCCAGGCATGGTCCAGAGTCTCCAGACTCC
ACAGATTAAAGTTACGGTAAATGAATACCCTGTTGCTCCCTTACTACAGT
ACAACAAAACCCAGGAAGAAGCCTACTCCTCGCCTATTCGTAGAGAAGAG
TACTTCCAAAAAGGGGCATGCAGAGAAGAGCACAGTAGCAAACGATGAGT
CAGTTGCCAGCAGCAGCTACCCTACAGAGAGTTCATTCCAAGACCATGAC
TATGTTGTTCCAGAAGCAGCCATGTCTGTGCCTGACCTTCGACCTCTGAG
CCTGTCCCCTCACATAACTTTGGCCTCTGACCCCCCATCTCTTGGTTTCA
CCAAGGATGTGGCCTTAGCCCTTGACCCTCAACCCCTAGGCTTGTCCCCG
GTTATGACTCCTGACCCCCGACCCCTGGGTCTGTCCCAGGACGTGACTTT
GGCCCCTGACCCCCAACCCCCGGGTCTGTCCCAGGACATGACCTTGGCCC
CTGACCCCCGACCTCTGGGTCTGTCCAAGGATGTGACCTTGGCAGTTCTC
CCCAGACTGTACATGGAGGAAGTGGTGTCTGAACTGGGCAGGAGAAACAT
CAGCACCGGGGACGTCAACAACAAGGAGCTGCTGGTGGCTGTGCTCAGGG
TTGTCATGGAGAAGGAATACAGCGGGACGGGAGTGGTGTTCGAAAAGGCG
AACATCGTTGTTTCAAAGCCGGGTCAAGGAAAAGCCATGTCAGCTACGTT
GTGTGGACAGGCACGGGAAAAGCAACGTCCCGAGCCCAGGCGTCAGCCAA
ACCATCGCATCCTCATGTACCAAACAGACCCCAACAGTGGACAGCCCCTG
CCACTGCAATCATACAACGATGGGCGACCCCTCCAACCGACCCAGCGCCT
GTCCAACAATGCACCACCCCTACCACAGCAACAGCACCTGAACAACAATG
GATCTCCCCTACCACAGCACCTGCACCCAAACAACAATGGACAGCCCCAG
CCACTGCGCCTGCACTTGAACAACAACAGACCACCACTACCACAGCATCT
GTACCTGCCCAACAGTGCACCACCCCCATCACAGCACCTGCACCTGTCCA
ACAATGGACCACCCCTACCACAGCACCTGCACCTGAACAACAATGGACAG
CCACTGCACCTGCACCTGAACAACAACGGATCACCCCTACTACAGCAACA
GCACCTGTCCAACAATGGACCACCCCTACCACAGCACCTTCACATGAACA
ACAACGAATCACCACTACCACAGCACCGGTATCTGCCCAACAATGCACCA
CCCCCATCACAGCGCCTGCACCTGAACAACAATGGATCACCCTCTCCCCA
ACACAAGTGGAACAATCCGCTATGTCAGAATTGGACAACTTTGCTGATGG
AGGTTCCTGGTCATCCTCTGACACAGAGGAGCCAGGCATGGTCCAGAGTC
TCCAGACTCCACAGATTAAAGTTACGGTAAATGAATACCCTGTTGCTCCC
TTACTACAGTACAACAAAACCCAGGAAGAAGCCTACTCCTCGCCTATTCG
TAGAGAAGAGTACTTCCAAAAAGGGGCATGCAGAGAAGAGCACAGTAGCA
AACGATGAGTCAGTTGCCAGCAGCAGCTACCCTACAGAGAGTTCATTCCA
AGACCATGACTATGTTGTTCCAGAAGCAGCCATGTCTGTGCCTGACCTTC
GACCTCTGAGCCTGTCCCCTCACATAACTTTGGCCTCTGACCCCCCATCT
CTTGGTTTCACCAAGGATGTGGCCTTAGCCCTTGACCCTCAACCCCTAGG
CTTGTCCCCGGTTATGACTCCTGACCCCCGACCCCTGGGTCTGTCCCAGG
ACGTGACTTTGGCCCCTGACCCCCAACCCCCGGGTCTGTCCCAGGACATG
ACCTTGGCCCCTGACCCCCGACCTCTGGGTCTGTCCAAGGATGTGACCTT
GGCAGTTCTCCCCAGACTGTACATGGAGGAAGTGGTGTCTGAACTGGGCA
GGAGAAACATCAGCACCGGGGACGTCAACAACAAGGAGCTGCTGGTGGCT
GTGCTCAGGGTTGTCATGGAGAAGGAATACAGCGGGACGGGAGTGGTGTT
CGAAAAGGCGAACATCGTTGTTTCAAAGCCGGGTCAAGGAAAAGCCATGT
CAGCTACGTTGTGTGGACAGGCACGGGAAAAGCAACGTCCCGAGCCCAGG
CGTCAGCCAAACCATCGCATCCTCATGTACCAAACAGACCCCAACAGTGG
ACAGCCCCTGCCACTGCAATCATACAACGATGGGCGACCCCTCCAACCGA
CCCAGCGCCTGTCCAACAATGCACCACCCCTACCACAGCAACAGCACCTG
AACAACAATGGATCTCCCCTACCACAGCACCTGCACCCAAACAACAATGG
ACAGCCCCAGCCACTGCGCCTGCACTTGAACAACAACAGACCACCACTAC
CACAGCATCTGTACCTGCCCAACAGTGCACCACCCCCATCACAGCACCTG
CACCTGTCCAACAATGGACCACCCCTACCACAGCACCTGCACCTGAACAA
CAATGGACAGCCACTGCACCTGCACCTGAACAACAACGGATCACCCCTAC
TACAGCAACAGCACCTGTCCAACAATGGACCACCCCTACCACAGCACCTT
CACATGAACAACAACGAATCACCACTACCACAGCACCGGTATCTGCCCAA
CAATGCACCACCCCCATCACAGCGCCTGCACCTGAACAACAATGGATCAC
CCTCTCCCCAACACAAGTGGAACAATCCGCTATGTCAGAATTGGACAACT
TTGCTGATGGAGGTTCCTGGTCATCCTCTGACACAGAGGAGCCAGGCATG
GTCCAGAGTCTCCAGACTCCACAGATTAAAGTTACGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000021 | genome | Sc0000021:2196401..2198666 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95320_evm0 |
| Biotype | protein_coding |
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