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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95310_evm1 >transcript:BL95310_evm1-protein ID=transcript:BL95310_evm1-protein|Name=transcript:BL95310_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=212bp
MSSTTPPSQYWLEYTFTASEKCTLKDLVRGTVDALTKATSTVGNGKILFL
FKVLAEAKLIAXQATDAAELDSALTDNPAPYFGQLVQVQCLPLRPYETFA
KELLGVETSVQQTEEWAAPGQFYCVTVDVEYAGMTQEELFKIWKQEAIVA
LGVMEKGGAKLWKVATERKVLILVKMTTPDMLDNLFTAELPFFKQIGNQA
HTTCKAIVPFQY Run BLAST on NCBI mRNA from alignment at Sc0000018:3837608..3840866- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95310_evm1 ID=transcript:BL95310_evm1|Name=transcript:BL95310_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3259bp|location=Sequence derived from alignment at Sc0000018:3837608..3840866- (Branchiostoma lanceolatum)
ATGAGCAGCACAACTCCTCCAAGTCAGTACTGGCTGGAGTACACCTTCAC
TGCATCAGAGAAGTGCACACTTAAAGATCTGGTTAGAGGCACAGTCGATG
CTCTAACCAAGGCCACATCAACAGTGGGCAACGGAAAAATTCTGTTCCTC
TTCAAAGTAAGACTCCTCCACTGTTCAGCATTTCTAGATGTGTCAACTTA
TAGCATTAGTAACTTTATTTTCCACTTGCGTTGGGTCAAAAATTATTTTC
CACTTGCGTTGGGTCAAAAATGGACTTTGATCTTTGTCAATCATCCCATT
GAAACCAATACTTAAGACTTCCCTCACAATAAAAGGGGCGCTCTTAGTCT
TAGGACACCTACTGTCAGTCTTGAAAATAATGTTTGCAGTGTTTGTGTGA
ATAGTTGTTCATTGATTTTAACCGTTAGCAACTTGATTCTTTTTATTGCT
TTGACCTAAAAATTGACCTGGAACTTTATTAGCAATCATCCCATAGGAAC
CAACTTATACTTCCATGCATCACACCCAACAGGTCTGCATGAAGGAGCAC
TACTCAATTCCTGAATCATAAATGGTTCATTTATTTGTTCATCTGTAAAA
AAATTCAAAAATTTGATTTTTATTCCTAAAGATGGGGTCTTTTAGAAAAT
AACACCCGCTTCTGGAGTTGACTGCCCCTGTAAATTTTGTGGCGTAAGCG
TAGAGCGTGCGGCTGTCAAACAATGGGACCCGGGATCTAATCCCAGGTTG
TGCCCAGAGACATGTCCGAACTTGCGCCCCGACGTTGTGCCCTTGGGAAA
GGCACTTAACACGACCTTCCTCACTTCACTCAGGTGTAAATGAGTACCTA
GCTCATCTAGGGTTAGGGACGTCCTTCGGATAGGACGTTAAATGGAGGTC
CCGTGTTTGACGAGAGTCACACCTTGAGCACGTAAAAGAACCCACCACAT
CTTTCGAAAAAGAGTAGGGGCATGCCCCGGTGTGAGTGGATCATTCCGGC
CTAAATGGGGTAGGGAATTTCCCGAGCAGTCTTCGTAATCCCTGCTTCTC
CTAATGGGTCAGTGAAGTCATGCTTGTCTCGAGCATTGATGTTTCTGACC
TAGGGCAAAGAGATGCTGCTACAGTAAGAATTAGTTCAGTGCTTTGATGA
GTGGCCCCCTACGGCCTTGCACTGAGCGAGTTCGTTTTAAAAAATTTTTT
TTTATTTAGCATGCCACGGTGCAGCAGTTTAACCAATCTTCCATCTACAT
CAGAATATGGATTTGCATGCTACTGGTATACTATACCTTGTGGTCCTTTG
GAAGGAAAGGAGATCCCACCACACCTCAAGAAAATTCAATTTAGATTACC
CATCACATTCATCAGTAAAAGGTACACCTCAGTGTGCAACGTTTGAAAAC
AAATCAGCCTGGATTGAAAGAATTTATTTGTCAGACAGATACATGTCTAC
ATGTACATGTAGTCTGTGTTAGATCTCCCACCATTGTAACGTTACATGTA
CTTGCACACATGCTCAGTGAATACACATTGTTCAGTTGTGTTATGTGCAT
GTCAATCTGTGACTCCTTAATTAACAGGGATTGGAACAATCAACACCTTG
TAGTTTCTTCTAAATCTAATCTACCTTATGTGTCGTAATAACAAAGAACA
GCATCTTTATGTCCCCCAAGGTGTTGGCAGAAGCTAAACTTATTGCAGGT
GAGGCTCAACTCTTCTAAATATCACTACAGTGTAACAGTATTGACTTTGT
GACTTTTGCATTTATGTGCATTTCTACACACTTCAGAAAACCACAAATGC
ATAGCACTTCAGCATTCTGAATGTCAATGAAACATTTCTTTATAAACATT
TCCAGTTATCCAAGCCACGGATGCCGCAGAGNCCAAGCCACGGATGCTGC
AGAGCTTGACTCTGCCCTGACAGACAACCCCGCCCCTTACTTTGGCCAGT
TGGTGCAGGTTCAGTGCCTCCCACTTCGTCCTTATGAGACATTTGCGAAG
GAGCTTCTGGGCGTTGAGACTTCGGTTCAACAAACCGAGGAATGGGCCGC
TCCAGGCCAGTTCTACTGCGTAACTGTTGATGTAGAGTATGCTGGTAAGG
AGTCCTCTTTATCACATTATTGTTTTACTACCTTAACAATGTCTTGCATT
ATGCAACTTCCTATATGTGGGAACTTATTCTGAACAATTAATGAACAAAT
CTCATGACTTTTGATTTCATACATGTATTTTTTGCATACCGGTACCACTG
TATATTATTTACTAGAAAATAAGTATTGGCTGAGGTATAGGGAAATGCAC
ATCATCATCATCATCATCATCATTCTTCTGGATTACTCCGGTGAGATACA
ATCAATAATGAACATGTATTTACAACTACAAGGAAGCAATTCATATTTAG
TTTTACCATACAAAATATACATGTAGTCAGTATTAGGATTCTTCTTGATA
TTCTCTCCAAGGTATGACGCAGGAAGAACTGTTTAAGATATGGAAACAGG
AGGCCATTGTAGCACTTGGTGTAATGGAAAAAGGCGGTGCCAAGCTCTGG
AAGGTTGCGACAGAGAGGAAGGTATATAATATACATGTATAAAAAAGATA
CTGGGGGTGTCATTGTAAACTTTAGTAAAGGATTGTATCGCTTCTCAGTT
ACATGTATTGATTTAGAATTTCAAAAGGGCTATCTGTAATAGACAGACCT
TTAGAAATGAGTAGTATGCCTGACAAATGTTATCAAATCATGCCGGTTAA
TGTCAAAATGAATCACATTAGACCGTTTGTACATGTAGAGACAGTATTTT
TTCATCTTTAACAATCAAAGCAAACCTAATGTACATTGTAGTTCACAGAT
GCTGTGCATGTAGACATTTTGTTGTAAATAACAGTTTTGCACATTTCCTC
AAGAATCTTCTGTATACTTCGAAGAAGAGTAATTTTTTGGTTTTTAACAA
GAAAGAATTATAGCCATAGCAACAGTTACTGATATCTGGATGAACAGGTT
GATTATTTTAAAGAAGAATTTTTTTTAAAGTAGTTGAAATCAGAAGAACA
TTTGAAGGGGGGGATATCTCAGATCACATAACAGTAATTGAAGAAAAATC
TAATGTTTGTGTTGATGGCTTGTATAGGTGCTGATCCTAGTGAAGATGAC
AACTCCAGACATGCTCGATAACTTGTTCACTGCGGAGCTGCCATTCTTCA
AGCAGATAGGGAACCAGGCCCACACAACCTGCAAGGCTATTGTACCATTC
CAGTACTGA Coding sequence (CDS) from alignment at Sc0000018:3837608..3840866- >transcript:BL95310_evm1 ID=transcript:BL95310_evm1|Name=transcript:BL95310_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3195bp|location=Sequence derived from alignment at Sc0000018:3837608..3840866- (Branchiostoma lanceolatum)
ATGAGCAGCACAACTCCTCCAAGTCAGTACTGGCTGGAGTACACCTTCAC
TGCATCAGAGAAGTGCACACTTAAAGATCTGGTTAGAGGCACAGTCGATG
CTCTAACCAAGGCCACATCAACAGTGGGCAACGGAAAAATTCTGTTCCTC
TTCAAAGTGTTGGCAGAAGCTAAACTTATTGCAGNCCAAGCCACGGATGC
TGCAGAGCTTGACTCTGCCCTGACAGACAACCCCGCCCCTTACTTTGGCC
AGTTGGTGCAGGTTCAGTGCCTCCCACTTCGTCCTTATGAGACATTTGCG
AAGGAGCTTCTGGGCGTTGAGACTTCGGTTCAACAAACCGAGGAATGGGC
CGCTCCAGGCCAGTTCTACTGCGTAACTGTTGATGTAGAGTATGCTGGTA
TGACGCAGGAAGAACTGTTTAAGATATGGAAACAGGAGGCCATTGTAGCA
CTTGGTGTAATGGAAAAAGGCGGTGCCAAGCTCTGGAAGGTTGCGACAGA
GAGGAAGGTGCTGATCCTAGTGAAGATGACAACTCCAGACATGCTCGATA
ACTTGTTCACTGCGGAGCTGCCATTCTTCAAGCAGATAGGGAACCAGGCC
CACACAACCTGCAAGGCTATTGTACCATTCCAGTACTGAATGAGCAGCAC
AACTCCTCCAAGTCAGTACTGGCTGGAGTACACCTTCACTGCATCAGAGA
AGTGCACACTTAAAGATCTGGTTAGAGGCACAGTCGATGCTCTAACCAAG
GCCACATCAACAGTGGGCAACGGAAAAATTCTGTTCCTCTTCAAAGTGTT
GGCAGAAGCTAAACTTATTGCAGNCCAAGCCACGGATGCTGCAGAGCTTG
ACTCTGCCCTGACAGACAACCCCGCCCCTTACTTTGGCCAGTTGGTGCAG
GTTCAGTGCCTCCCACTTCGTCCTTATGAGACATTTGCGAAGGAGCTTCT
GGGCGTTGAGACTTCGGTTCAACAAACCGAGGAATGGGCCGCTCCAGGCC
AGTTCTACTGCGTAACTGTTGATGTAGAGTATGCTGGTATGACGCAGGAA
GAACTGTTTAAGATATGGAAACAGGAGGCCATTGTAGCACTTGGTGTAAT
GGAAAAAGGCGGTGCCAAGCTCTGGAAGGTTGCGACAGAGAGGAAGGTGC
TGATCCTAGTGAAGATGACAACTCCAGACATGCTCGATAACTTGTTCACT
GCGGAGCTGCCATTCTTCAAGCAGATAGGGAACCAGGCCCACACAACCTG
CAAGGCTATTGTACCATTCCAGTACTGAATGAGCAGCACAACTCCTCCAA
GTCAGTACTGGCTGGAGTACACCTTCACTGCATCAGAGAAGTGCACACTT
AAAGATCTGGTTAGAGGCACAGTCGATGCTCTAACCAAGGCCACATCAAC
AGTGGGCAACGGAAAAATTCTGTTCCTCTTCAAAGTGTTGGCAGAAGCTA
AACTTATTGCAGNCCAAGCCACGGATGCTGCAGAGCTTGACTCTGCCCTG
ACAGACAACCCCGCCCCTTACTTTGGCCAGTTGGTGCAGGTTCAGTGCCT
CCCACTTCGTCCTTATGAGACATTTGCGAAGGAGCTTCTGGGCGTTGAGA
CTTCGGTTCAACAAACCGAGGAATGGGCCGCTCCAGGCCAGTTCTACTGC
GTAACTGTTGATGTAGAGTATGCTGGTATGACGCAGGAAGAACTGTTTAA
GATATGGAAACAGGAGGCCATTGTAGCACTTGGTGTAATGGAAAAAGGCG
GTGCCAAGCTCTGGAAGGTTGCGACAGAGAGGAAGGTGCTGATCCTAGTG
AAGATGACAACTCCAGACATGCTCGATAACTTGTTCACTGCGGAGCTGCC
ATTCTTCAAGCAGATAGGGAACCAGGCCCACACAACCTGCAAGGCTATTG
TACCATTCCAGTACTGAATGAGCAGCACAACTCCTCCAAGTCAGTACTGG
CTGGAGTACACCTTCACTGCATCAGAGAAGTGCACACTTAAAGATCTGGT
TAGAGGCACAGTCGATGCTCTAACCAAGGCCACATCAACAGTGGGCAACG
GAAAAATTCTGTTCCTCTTCAAAGTGTTGGCAGAAGCTAAACTTATTGCA
GNCCAAGCCACGGATGCTGCAGAGCTTGACTCTGCCCTGACAGACAACCC
CGCCCCTTACTTTGGCCAGTTGGTGCAGGTTCAGTGCCTCCCACTTCGTC
CTTATGAGACATTTGCGAAGGAGCTTCTGGGCGTTGAGACTTCGGTTCAA
CAAACCGAGGAATGGGCCGCTCCAGGCCAGTTCTACTGCGTAACTGTTGA
TGTAGAGTATGCTGGTATGACGCAGGAAGAACTGTTTAAGATATGGAAAC
AGGAGGCCATTGTAGCACTTGGTGTAATGGAAAAAGGCGGTGCCAAGCTC
TGGAAGGTTGCGACAGAGAGGAAGGTGCTGATCCTAGTGAAGATGACAAC
TCCAGACATGCTCGATAACTTGTTCACTGCGGAGCTGCCATTCTTCAAGC
AGATAGGGAACCAGGCCCACACAACCTGCAAGGCTATTGTACCATTCCAG
TACTGAATGAGCAGCACAACTCCTCCAAGTCAGTACTGGCTGGAGTACAC
CTTCACTGCATCAGAGAAGTGCACACTTAAAGATCTGGTTAGAGGCACAG
TCGATGCTCTAACCAAGGCCACATCAACAGTGGGCAACGGAAAAATTCTG
TTCCTCTTCAAAGTGTTGGCAGAAGCTAAACTTATTGCAGNCCAAGCCAC
GGATGCTGCAGAGCTTGACTCTGCCCTGACAGACAACCCCGCCCCTTACT
TTGGCCAGTTGGTGCAGGTTCAGTGCCTCCCACTTCGTCCTTATGAGACA
TTTGCGAAGGAGCTTCTGGGCGTTGAGACTTCGGTTCAACAAACCGAGGA
ATGGGCCGCTCCAGGCCAGTTCTACTGCGTAACTGTTGATGTAGAGTATG
CTGGTATGACGCAGGAAGAACTGTTTAAGATATGGAAACAGGAGGCCATT
GTAGCACTTGGTGTAATGGAAAAAGGCGGTGCCAAGCTCTGGAAGGTTGC
GACAGAGAGGAAGGTGCTGATCCTAGTGAAGATGACAACTCCAGACATGC
TCGATAACTTGTTCACTGCGGAGCTGCCATTCTTCAAGCAGATAGGGAAC
CAGGCCCACACAACCTGCAAGGCTATTGTACCATTCCAGTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:3837608..3840866 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95310_evm1 |
| Biotype | protein_coding |
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