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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95308_evm0 >transcript:BL95308_evm0-protein ID=transcript:BL95308_evm0-protein|Name=transcript:BL95308_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MADSVFSKYDKNGDGTISCVELYDALKELLGMEPWWTLFQRVRSKADANR
DGKLTKEEFCNVAAIFEEIKALKAVFGEMDQDRSGTMSFEEMREKAVTFY
TTHADKYDGKRAMHVMNHYAGDKKKGMMEEEFLDIMFKDSC Run BLAST on NCBI mRNA from alignment at Sc0000018:3102256..3105764- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95308_evm0 ID=transcript:BL95308_evm0|Name=transcript:BL95308_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3509bp|location=Sequence derived from alignment at Sc0000018:3102256..3105764- (Branchiostoma lanceolatum)
ATGGCAGACTCTGTCTTTTCCAAGTATGACAAGAACGGGGACGGCACAAT
CAGCTGTGTGGAGCTCTATGATGCCTTGAAAGAGCTTTTGGGCATGGAAC
CATGGTGGACACTTTTCCAGGTAAAGGTTTATACTGAATCAGGCTCTGAT
GGGCTTATATGTCCAGCCTGCCTAAGGCCCACTTTACATTGAGCTTTTTG
CAACAGCGGTACTCACGACAGTGGTACTGGCGACAGCGGGAACCCCGTGT
AAAGAGAATCCCCGCTGTCGTAGTCCCGCTGTCTTCAAATTTTCTCCTGA
CAACTCTGAAGTGGTCGCCCGACAAGTCAGCGGGAGTCCCTGACAACTTT
CCGCCAGATTTCCGGGTGGTGTGTCACGACAGCAGCGTCCCGACGGCGGG
AAATATTGCTGCTGTCGCGAAAAGCTGGGTGTAAAGTGGGCCTAAATGTC
TAACTGATTCAATTATAAAATATGGATGAAATCCTCTGGGAATTGCTCAT
TTTGTCTTGTACGACTTACAGTCTCACTCACTCACTCACTCACTCACTCA
CTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACT
ATCTGTGATATTGTCTGTTGTTCCCAGTCATGCTAGGGTTATAGTCAATT
CTATTGTGACTTAGGCTCTCTTTACATTATACTTTTGCCGTCAGCGCCAC
TGGCGTCAGCGCCACTGGCGACAGCGGGAACCCCGTGTAAAGACAATTCC
CGTCGACGTAGTCCCGCTGTCAACAAATTTTCTCCCGTCAGCTACGAAGC
CGTCGCCCGTCAGCACAGCGGGAGTCCCCGTCAACTTCAAACTCCGTCTG
AAGAGCTCCCGTCAGCGGGAGTCAGGGTTTCGGCGATTAGCATAAAACAC
GCGCTGATTAGCTACTTAGATCCCCGGTATATAACGTTGGGTAACATAAA
TTCGGGATTTTTCCGATAATGGTTGACTGAAATCAATCTAGCAGAACAAT
AAACCATCCTTTTTTTCTATTATTCTGTCAGTATCATGTACTATCTTTGC
ACTTATCATATATATGGTAGATTTTGTCTCTAGTCGTACTGACACCATAA
TATTTCAACTTGAAACTACCGTCCGCCGCACGCACAATGACGGTGCTGTC
GGACAGGGGTGAACATTAATTCGGGAGAGAAGATTCGTCTTGAATATCTT
ACCGCTAATTACATTTTATACAGCAGCTATTCGTTCCATCCTTGGCTTGA
GGAGAGTGCTATGGATATAGACGTGTCCAAGTAAAAAAAATACACGAAAA
AACGGCCGTACCGCACGCATCAGGCCTTCGGGAACAACCCTTGTGTTGAG
TCGGTAGAACGTCACTCAAAGTTCACCCCCACCGTCATGGAAATTTGTAC
ATTATTCATCGGGGCGTTAGCTGGATGCCGTAGAAATGGTAATACTACTA
TGTCCATGTGTTTCTGCTTGTGCTAAGAGCAAACTTTGAGGAAAATATCG
CCATCAGTCCACTATCACACACAACATTTAGACCAAAAAGTGTTCCTCGC
AAACGTTTGTCGTCTGCCGAATAGCAGGATTCTGGGTAACGAATATGGCG
GCGGGAAAATTCACCGTAGTGCCGTAGCCATTGGTTGTAGCAACAAAGAG
GCGTTTTGATGATTAATCACACTTAGAGTCCAGTTGTAGGTTAGCAAAAG
AGATTCTAATAAGTTGTATTGTAAATAATTGTGTTTAGCAGGAAGCGGAT
GTGACATTTGTCTTATAAACCAGCGAACAACTATGTACATATAATTCTCC
CACGAAGCCCTCAGACTGTGACAATAAGGGACGGAGAGTTTTTGACGTAG
CCAACTTCTAATGCATGGTTATCGAAGCTTTTCAGACAGTGTTCTGAATG
CGTTAGTCTGTCAAGTTTGCATTTCTAGCGGTATTACTGATGTTGCATCT
AGCACATATCCCTAAACACCCCGTTTTCGAAAAATCGAAAAATGGCGAAA
TACAAGCACCGCAGGTGTCTGTCAGATTTCCGGGCGGTGTGTCTAGAGAC
GTCGCGACAGCGGCCTCCCGACAGCGGGAAATTTCGCCGCTGACGCGAAA
AACGTAATGTAAACTGCGCCTTAGATATGCATTTATTCAAAGTAGTTAAA
AATTATTACAGATAATACCTGGAAACCCTTGAGGTGACTTGGAATTTCTT
GCATTAGTAGATGTGGAGGCTTGATACAATTCTTCTATAGTATACATGTA
CATGATAATTTTCCTATCTTTTTGTCACATGTCTTTTTGTTTATCTTTGG
TTTATCTAAAGAAGCAACAACATGAATTGGTTTTATCTACAACAATATGA
ATTGGCAAGATGTAGCTGATCACAGAACTAAACAGTAAAACATCGAGGAT
TTTGGCAACACCTCAAGGGCAGAGCCTTTAAATTGATGTGGTATCATTTT
TTTTCAGCGAGTGAGAAGCAAGGCTGATGCCAATCGTGATGGGAAGCTGA
CAAAGGAGGAGTTCTGCAACGTAGCTGCCATCTTTGAGGAGATCAAAGCT
CTCAAAGCTGTCTTTGGGGAAATGGACCAGGTTGTTTTTTTGGTCCATAT
ATGACTATCATTGGGCTTATTGTTGCAGATGCATATACATTTGCAGTCAG
TTACAAGCATACAAGCTAGACATGCATGAGGTTGGCTGATGATCTGTTAA
TGTATAATGTAAGATACAATGTGACCTTGCTCCACTTATTGCTTAGATAA
CTTATAACGCATTTATGTAATTTTTCTCAGAGCTGATTTGCTTGCTTTCA
AACTACTATAATAATTAATGCGACCAGTTATGCTTCACGAATAATTTACC
ATCAACGCTTAAAGTTGAATTAGAGTGGTCTGCTTACGATTAATGGTGAA
TTATTGGCATGGAGACCCTCTAATGTATATAATGGCTTTTCTTGCTGCTG
CTACTGACTTTATAGCCTCTCTCTCTATCTATAGCATCCTTTTAATCATG
ACAGACAATCCTTCTGGAATAAATAGATCCAAGTGATACAAGCAGGGCTG
TCTCCAGGTGCCGTCCCGGGACGGAAATTTGCTTGTTGGGACAGGAAAAA
TTTACCCTGCCTGTCCAAAAATCTGAAGTTTATGACATGAAATTGAGGAA
AATGTACCTTCGTAAGCTTAAAATGACGAATTTAGCAAGAAAAATTCAAC
ACATTGGCTCCCAAACAATGAGTGGGACGGAAAAAAATTAAAAGCTGGAG
ACAGTCCTGGATACAACGAAGCTGAGACATGTTTATTGTCTTTTTTTAGT
ATTGACCTTCATTCCCCATTTTTTAGGATCGCAGTGGGACAATGTCATTT
GAAGAGATGCGAGAGAAGGCCGTCACCTTTTACACCACCCATGCTGATAA
GTACGATGGGAAAAGGGCCATGCACGTGATGAACCACTATGCTGGGGACA
AGAAAAAGGGGATGATGGAGGAAGAGTTCCTGGATATCATGTTTAAAGAT
AGTTGCTAA Coding sequence (CDS) from alignment at Sc0000018:3102256..3105764- >transcript:BL95308_evm0 ID=transcript:BL95308_evm0|Name=transcript:BL95308_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1278bp|location=Sequence derived from alignment at Sc0000018:3102256..3105764- (Branchiostoma lanceolatum)
ATGGCAGACTCTGTCTTTTCCAAGTATGACAAGAACGGGGACGGCACAAT
CAGCTGTGTGGAGCTCTATGATGCCTTGAAAGAGCTTTTGGGCATGGAAC
CATGGTGGACACTTTTCCAGCGAGTGAGAAGCAAGGCTGATGCCAATCGT
GATGGGAAGCTGACAAAGGAGGAGTTCTGCAACGTAGCTGCCATCTTTGA
GGAGATCAAAGCTCTCAAAGCTGTCTTTGGGGAAATGGACCAGGATCGCA
GTGGGACAATGTCATTTGAAGAGATGCGAGAGAAGGCCGTCACCTTTTAC
ACCACCCATGCTGATAAGTACGATGGGAAAAGGGCCATGCACGTGATGAA
CCACTATGCTGGGGACAAGAAAAAGGGGATGATGGAGGAAGAGTTCCTGG
ATATCATGTTTAAAGATAGTTGCTAAATGGCAGACTCTGTCTTTTCCAAG
TATGACAAGAACGGGGACGGCACAATCAGCTGTGTGGAGCTCTATGATGC
CTTGAAAGAGCTTTTGGGCATGGAACCATGGTGGACACTTTTCCAGCGAG
TGAGAAGCAAGGCTGATGCCAATCGTGATGGGAAGCTGACAAAGGAGGAG
TTCTGCAACGTAGCTGCCATCTTTGAGGAGATCAAAGCTCTCAAAGCTGT
CTTTGGGGAAATGGACCAGGATCGCAGTGGGACAATGTCATTTGAAGAGA
TGCGAGAGAAGGCCGTCACCTTTTACACCACCCATGCTGATAAGTACGAT
GGGAAAAGGGCCATGCACGTGATGAACCACTATGCTGGGGACAAGAAAAA
GGGGATGATGGAGGAAGAGTTCCTGGATATCATGTTTAAAGATAGTTGCT
AAATGGCAGACTCTGTCTTTTCCAAGTATGACAAGAACGGGGACGGCACA
ATCAGCTGTGTGGAGCTCTATGATGCCTTGAAAGAGCTTTTGGGCATGGA
ACCATGGTGGACACTTTTCCAGCGAGTGAGAAGCAAGGCTGATGCCAATC
GTGATGGGAAGCTGACAAAGGAGGAGTTCTGCAACGTAGCTGCCATCTTT
GAGGAGATCAAAGCTCTCAAAGCTGTCTTTGGGGAAATGGACCAGGATCG
CAGTGGGACAATGTCATTTGAAGAGATGCGAGAGAAGGCCGTCACCTTTT
ACACCACCCATGCTGATAAGTACGATGGGAAAAGGGCCATGCACGTGATG
AACCACTATGCTGGGGACAAGAAAAAGGGGATGATGGAGGAAGAGTTCCT
GGATATCATGTTTAAAGATAGTTGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:3102256..3105764 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95308_evm0 |
| Biotype | protein_coding |
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