|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95300_evm1 >transcript:BL95300_evm1-protein ID=transcript:BL95300_evm1-protein|Name=transcript:BL95300_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=431bp
MNFYSVSYLIPSTGGTVPENVLITKLLENYSTDARPVLNSLDTTTVHFDI VIAQILELNAKEQVLTSNVWIRQRWVDEVLKWNPEENGNITVVHINSENI WRPDTILYNRLHDEGWSATPDTNAIIEHTGEVFWPYPVTVRSSCILDVSL FPFDVQRCPLEFGSWTYHGGQINLLNVSAEGVTDEFIENGEWILRSFEAD RHVHRNISGKPFPTIEYTVEISRRTLYYIYYVVAPSFLLALLALLGFYLP SDSGEKLSLSITMLLALIVFMQLVTEKLPPISTSIPLIGKFFGGVIVLVT LSSAMTIFVLSLHYRGPKIYPIPQWVRKVFFLGPTKVGKVKVITNPGAHT VKMNGVPGETTPSNPETQTLSRTLARIEQSISHFVEDHEKKSQYIALEKE WKFLAKRIDRCLLAFFMVALVIMTLVVLLAR Run BLAST on NCBI mRNA from alignment at Sc0000017:3900167..3902658- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95300_evm1 ID=transcript:BL95300_evm1|Name=transcript:BL95300_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2492bp|location=Sequence derived from alignment at Sc0000017:3900167..3902658- (Branchiostoma lanceolatum) ATGAACTTTTACAGCGTATCATACTTGATTCCGAGTAGGTACTGATTTCT
GGTGTATTTGATCTCTTTGTAAAAGTCTGCTTTACTACATGGTTGTGTTT
CTGCTTTCAATACTTCACTATCAAAGTTGTTTTCACTATCATCACTACAC
AAGGCACAGGTGGAACGGTCCCTGAAAACGTCCTGATTACCAAGCTGCTA
GAGAACTACTCTACCGACGCGCGGCCAGTTCTCAACTCTTTGGACACCAC
CACCGTTCACTTTGACATCGTCATAGCACAGATTCTAGAGCTGGTAAGAA
AAAATGACGTTAGCTTCATTTCGTGCTTGTACGGGAGAAACATACCAAAG
AGCTGTTGAAATGATAGTTTTGACATAAAAACATAAGCATAATGCTCATC
TGTTTGTATTCATTTGGAGATGCTGATTTGCAAATTTGATAGAATATTTT
TTCTTCCCTTTTCGCCAGAATGCAAAGGAGCAGGTCCTGACATCAAATGT
ATGGATACGCCAGGTAAACTGTAAATCATAATGATTTTAAACTGAATGAT
ATTCCAGCTAAATCCTATTTTTGCCTAATGTTCATCTTTGATTATGGTAA
TTCTAATGGAACAGCAACTACAACCATGGTTTTGATTGATTGATTGATTG
GTCGTTTGTTTGATTGATTGATTGATTGGTTGATTGATTGATTGATTGAT
TGATTGGTAGATATATTGATTGATTGGTAGGTATATTGGTTGATTTGTAG
ATATATTGATTGATTGGTTGGTTGATCGATTGGTTGATTGATTGATTGAT
TGTTTGATTGATTGACAGAGATGGGTTGACGAGGTTCTCAAGTGGAACCC
TGAAGAGAACGGCAACATCACGGTTGTGCACATCAACAGCGAGAACATAT
GGCGGCCAGATACAATCCTGTACAACAGGTAATTATACAGTGAATCAATG
ACAACATCATAGTACATGTCAATCAGTTTGTGTACATGACCATGGTGCAT
GTTAACACTTCAGATAGTCATGAACCGTGAGGAGGAGGGATACAACCGTA
GTCAGTACTAGTCAAATTTGGGACCGCATGCTTACCACTGCAGCGCCCCC
TAGCATGCAGTGAACATTCAGCATTGTCCTGAGGATCGTTGTAGAAAGAT
TATCGAGAGGTTAGCAGGTAGTTATTCGTGGCTGTATACAGAGAACCCTT
TTACCTGTAAGTTTATTAGTTAAGCTTCACCATATTTCATTGCCAACAGG
CTTCACGATGAAGGCTGGTCGGCCACTCCGGACACGAATGCCATCATCGA
GCACACCGGCGAAGTGTTCTGGCCATATCCGGTCACCGTCCGCAGCTCCT
GCATCCTGGACGTCAGCCTATTCCCATTCGACGTTCAGAGATGTCCGTTA
GAGTTCGGCTCCTGGACCTATCATGGCGGACAGATCAATCTACTAAACGT
GTCGGCTGAAGGAGTTACTGACGAGTTCATCGAAAACGGAGAATGGATCC
TGAGGTCGTTTGAAGCAGATCGACACGTACACAGAAATATTTCGGGAAAA
CCCTTCCCAACGATCGAGTACACCGTAGAAATATCGCGCAGGACACTGTA
CTACATTTACTACGTGGTGGCACCGAGTTTCCTCCTTGCGCTGCTGGCTC
TTTTGGGGTTTTACCTGCCATCGGATTCCGGGGAGAAGTTGTCACTGAGC
ATCACGATGTTGTTAGCCCTGATCGTCTTCATGCAGTTGGTCACAGAGAA
ACTTCCCCCGATATCTACAAGCATACCACTGATAGGTACGCCTATATCCA
ATCACGAAGGCCCATAACGACAACTTTTTAGAATGGTTAGCATAGACGGC
GAAATGGTCTGCGTAGGGGACGAAAGTTGTTTGTGTGGGCCTTCGTAAGT
AATACTTTTTTCTACATATCTAAATCGATACCCAAGAAAACAACTAATTT
CTAGTTGACACGTTTGATTGATCGATGATCTTTTCATTTTGAAGCCATGA
TATTGGAACCATCATTCACGTCTCAACAACAGCCATTTTTTTTCATTCTT
TTGGTGTTCAGGAAAGTTCTTCGGAGGGGTCATCGTGTTGGTGACCCTAT
CGTCGGCCATGACCATCTTTGTCCTCAGCCTCCACTACCGTGGCCCGAAA
ATCTACCCCATCCCGCAGTGGGTTCGTAAAGTGTTCTTCCTGGGCCCTAC
GAAAGTGGGGAAGGTCAAGGTCATCACCAACCCAGGTGCACACACCGTGA
AGATGAACGGCGTTCCAGGAGAGACTACGCCATCCAACCCTGAGACTCAG
ACACTCTCACGTACTCTCGCGAGAATTGAACAAAGCATCTCCCATTTCGT
AGAAGATCACGAGAAGAAGTCACAGTACATCGCCCTGGAGAAGGAATGGA
AGTTCCTGGCAAAACGGATCGACAGGTGCCTCCTAGCGTTCTTCATGGTT
GCTTTAGTCATCATGACCCTTGTTGTGCTTCTCGCTCGCTAG Coding sequence (CDS) from alignment at Sc0000017:3900167..3902658- >transcript:BL95300_evm1 ID=transcript:BL95300_evm1|Name=transcript:BL95300_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=7776bp|location=Sequence derived from alignment at Sc0000017:3900167..3902658- (Branchiostoma lanceolatum) ATGAACTTTTACAGCGTATCATACTTGATTCCGAGCACAGGTGGAACGGT CCCTGAAAACGTCCTGATTACCAAGCTGCTAGAGAACTACTCTACCGACG CGCGGCCAGTTCTCAACTCTTTGGACACCACCACCGTTCACTTTGACATC GTCATAGCACAGATTCTAGAGCTGAATGCAAAGGAGCAGGTCCTGACATC AAATGTATGGATACGCCAGAGATGGGTTGACGAGGTTCTCAAGTGGAACC CTGAAGAGAACGGCAACATCACGGTTGTGCACATCAACAGCGAGAACATA TGGCGGCCAGATACAATCCTGTACAACAGGCTTCACGATGAAGGCTGGTC GGCCACTCCGGACACGAATGCCATCATCGAGCACACCGGCGAAGTGTTCT GGCCATATCCGGTCACCGTCCGCAGCTCCTGCATCCTGGACGTCAGCCTA TTCCCATTCGACGTTCAGAGATGTCCGTTAGAGTTCGGCTCCTGGACCTA TCATGGCGGACAGATCAATCTACTAAACGTGTCGGCTGAAGGAGTTACTG ACGAGTTCATCGAAAACGGAGAATGGATCCTGAGGTCGTTTGAAGCAGAT CGACACGTACACAGAAATATTTCGGGAAAACCCTTCCCAACGATCGAGTA CACCGTAGAAATATCGCGCAGGACACTGTACTACATTTACTACGTGGTGG CACCGAGTTTCCTCCTTGCGCTGCTGGCTCTTTTGGGGTTTTACCTGCCA TCGGATTCCGGGGAGAAGTTGTCACTGAGCATCACGATGTTGTTAGCCCT GATCGTCTTCATGCAGTTGGTCACAGAGAAACTTCCCCCGATATCTACAA GCATACCACTGATAGGAAAGTTCTTCGGAGGGGTCATCGTGTTGGTGACC CTATCGTCGGCCATGACCATCTTTGTCCTCAGCCTCCACTACCGTGGCCC GAAAATCTACCCCATCCCGCAGTGGGTTCGTAAAGTGTTCTTCCTGGGCC CTACGAAAGTGGGGAAGGTCAAGGTCATCACCAACCCAGGTGCACACACC GTGAAGATGAACGGCGTTCCAGGAGAGACTACGCCATCCAACCCTGAGAC TCAGACACTCTCACGTACTCTCGCGAGAATTGAACAAAGCATCTCCCATT TCGTAGAAGATCACGAGAAGAAGTCACAGTACATCGCCCTGGAGAAGGAA TGGAAGTTCCTGGCAAAACGGATCGACAGGTGCCTCCTAGCGTTCTTCAT GGTTGCTTTAGTCATCATGACCCTTGTTGTGCTTCTCGCTCGCTAGATGA ACTTTTACAGCGTATCATACTTGATTCCGAGCACAGGTGGAACGGTCCCT GAAAACGTCCTGATTACCAAGCTGCTAGAGAACTACTCTACCGACGCGCG GCCAGTTCTCAACTCTTTGGACACCACCACCGTTCACTTTGACATCGTCA TAGCACAGATTCTAGAGCTGAATGCAAAGGAGCAGGTCCTGACATCAAAT GTATGGATACGCCAGAGATGGGTTGACGAGGTTCTCAAGTGGAACCCTGA AGAGAACGGCAACATCACGGTTGTGCACATCAACAGCGAGAACATATGGC GGCCAGATACAATCCTGTACAACAGGCTTCACGATGAAGGCTGGTCGGCC ACTCCGGACACGAATGCCATCATCGAGCACACCGGCGAAGTGTTCTGGCC ATATCCGGTCACCGTCCGCAGCTCCTGCATCCTGGACGTCAGCCTATTCC CATTCGACGTTCAGAGATGTCCGTTAGAGTTCGGCTCCTGGACCTATCAT GGCGGACAGATCAATCTACTAAACGTGTCGGCTGAAGGAGTTACTGACGA GTTCATCGAAAACGGAGAATGGATCCTGAGGTCGTTTGAAGCAGATCGAC ACGTACACAGAAATATTTCGGGAAAACCCTTCCCAACGATCGAGTACACC GTAGAAATATCGCGCAGGACACTGTACTACATTTACTACGTGGTGGCACC GAGTTTCCTCCTTGCGCTGCTGGCTCTTTTGGGGTTTTACCTGCCATCGG ATTCCGGGGAGAAGTTGTCACTGAGCATCACGATGTTGTTAGCCCTGATC GTCTTCATGCAGTTGGTCACAGAGAAACTTCCCCCGATATCTACAAGCAT ACCACTGATAGGAAAGTTCTTCGGAGGGGTCATCGTGTTGGTGACCCTAT CGTCGGCCATGACCATCTTTGTCCTCAGCCTCCACTACCGTGGCCCGAAA ATCTACCCCATCCCGCAGTGGGTTCGTAAAGTGTTCTTCCTGGGCCCTAC GAAAGTGGGGAAGGTCAAGGTCATCACCAACCCAGGTGCACACACCGTGA AGATGAACGGCGTTCCAGGAGAGACTACGCCATCCAACCCTGAGACTCAG ACACTCTCACGTACTCTCGCGAGAATTGAACAAAGCATCTCCCATTTCGT AGAAGATCACGAGAAGAAGTCACAGTACATCGCCCTGGAGAAGGAATGGA AGTTCCTGGCAAAACGGATCGACAGGTGCCTCCTAGCGTTCTTCATGGTT GCTTTAGTCATCATGACCCTTGTTGTGCTTCTCGCTCGCTAGATGAACTT TTACAGCGTATCATACTTGATTCCGAGCACAGGTGGAACGGTCCCTGAAA ACGTCCTGATTACCAAGCTGCTAGAGAACTACTCTACCGACGCGCGGCCA GTTCTCAACTCTTTGGACACCACCACCGTTCACTTTGACATCGTCATAGC ACAGATTCTAGAGCTGAATGCAAAGGAGCAGGTCCTGACATCAAATGTAT GGATACGCCAGAGATGGGTTGACGAGGTTCTCAAGTGGAACCCTGAAGAG AACGGCAACATCACGGTTGTGCACATCAACAGCGAGAACATATGGCGGCC AGATACAATCCTGTACAACAGGCTTCACGATGAAGGCTGGTCGGCCACTC CGGACACGAATGCCATCATCGAGCACACCGGCGAAGTGTTCTGGCCATAT CCGGTCACCGTCCGCAGCTCCTGCATCCTGGACGTCAGCCTATTCCCATT CGACGTTCAGAGATGTCCGTTAGAGTTCGGCTCCTGGACCTATCATGGCG GACAGATCAATCTACTAAACGTGTCGGCTGAAGGAGTTACTGACGAGTTC ATCGAAAACGGAGAATGGATCCTGAGGTCGTTTGAAGCAGATCGACACGT ACACAGAAATATTTCGGGAAAACCCTTCCCAACGATCGAGTACACCGTAG AAATATCGCGCAGGACACTGTACTACATTTACTACGTGGTGGCACCGAGT TTCCTCCTTGCGCTGCTGGCTCTTTTGGGGTTTTACCTGCCATCGGATTC CGGGGAGAAGTTGTCACTGAGCATCACGATGTTGTTAGCCCTGATCGTCT TCATGCAGTTGGTCACAGAGAAACTTCCCCCGATATCTACAAGCATACCA CTGATAGGAAAGTTCTTCGGAGGGGTCATCGTGTTGGTGACCCTATCGTC GGCCATGACCATCTTTGTCCTCAGCCTCCACTACCGTGGCCCGAAAATCT ACCCCATCCCGCAGTGGGTTCGTAAAGTGTTCTTCCTGGGCCCTACGAAA GTGGGGAAGGTCAAGGTCATCACCAACCCAGGTGCACACACCGTGAAGAT GAACGGCGTTCCAGGAGAGACTACGCCATCCAACCCTGAGACTCAGACAC TCTCACGTACTCTCGCGAGAATTGAACAAAGCATCTCCCATTTCGTAGAA GATCACGAGAAGAAGTCACAGTACATCGCCCTGGAGAAGGAATGGAAGTT CCTGGCAAAACGGATCGACAGGTGCCTCCTAGCGTTCTTCATGGTTGCTT TAGTCATCATGACCCTTGTTGTGCTTCTCGCTCGCTAGATGAACTTTTAC AGCGTATCATACTTGATTCCGAGCACAGGTGGAACGGTCCCTGAAAACGT CCTGATTACCAAGCTGCTAGAGAACTACTCTACCGACGCGCGGCCAGTTC TCAACTCTTTGGACACCACCACCGTTCACTTTGACATCGTCATAGCACAG ATTCTAGAGCTGAATGCAAAGGAGCAGGTCCTGACATCAAATGTATGGAT ACGCCAGAGATGGGTTGACGAGGTTCTCAAGTGGAACCCTGAAGAGAACG GCAACATCACGGTTGTGCACATCAACAGCGAGAACATATGGCGGCCAGAT ACAATCCTGTACAACAGGCTTCACGATGAAGGCTGGTCGGCCACTCCGGA CACGAATGCCATCATCGAGCACACCGGCGAAGTGTTCTGGCCATATCCGG TCACCGTCCGCAGCTCCTGCATCCTGGACGTCAGCCTATTCCCATTCGAC GTTCAGAGATGTCCGTTAGAGTTCGGCTCCTGGACCTATCATGGCGGACA GATCAATCTACTAAACGTGTCGGCTGAAGGAGTTACTGACGAGTTCATCG AAAACGGAGAATGGATCCTGAGGTCGTTTGAAGCAGATCGACACGTACAC AGAAATATTTCGGGAAAACCCTTCCCAACGATCGAGTACACCGTAGAAAT ATCGCGCAGGACACTGTACTACATTTACTACGTGGTGGCACCGAGTTTCC TCCTTGCGCTGCTGGCTCTTTTGGGGTTTTACCTGCCATCGGATTCCGGG GAGAAGTTGTCACTGAGCATCACGATGTTGTTAGCCCTGATCGTCTTCAT GCAGTTGGTCACAGAGAAACTTCCCCCGATATCTACAAGCATACCACTGA TAGGAAAGTTCTTCGGAGGGGTCATCGTGTTGGTGACCCTATCGTCGGCC ATGACCATCTTTGTCCTCAGCCTCCACTACCGTGGCCCGAAAATCTACCC CATCCCGCAGTGGGTTCGTAAAGTGTTCTTCCTGGGCCCTACGAAAGTGG GGAAGGTCAAGGTCATCACCAACCCAGGTGCACACACCGTGAAGATGAAC GGCGTTCCAGGAGAGACTACGCCATCCAACCCTGAGACTCAGACACTCTC ACGTACTCTCGCGAGAATTGAACAAAGCATCTCCCATTTCGTAGAAGATC ACGAGAAGAAGTCACAGTACATCGCCCTGGAGAAGGAATGGAAGTTCCTG GCAAAACGGATCGACAGGTGCCTCCTAGCGTTCTTCATGGTTGCTTTAGT CATCATGACCCTTGTTGTGCTTCTCGCTCGCTAGATGAACTTTTACAGCG TATCATACTTGATTCCGAGCACAGGTGGAACGGTCCCTGAAAACGTCCTG ATTACCAAGCTGCTAGAGAACTACTCTACCGACGCGCGGCCAGTTCTCAA CTCTTTGGACACCACCACCGTTCACTTTGACATCGTCATAGCACAGATTC TAGAGCTGAATGCAAAGGAGCAGGTCCTGACATCAAATGTATGGATACGC CAGAGATGGGTTGACGAGGTTCTCAAGTGGAACCCTGAAGAGAACGGCAA CATCACGGTTGTGCACATCAACAGCGAGAACATATGGCGGCCAGATACAA TCCTGTACAACAGGCTTCACGATGAAGGCTGGTCGGCCACTCCGGACACG AATGCCATCATCGAGCACACCGGCGAAGTGTTCTGGCCATATCCGGTCAC CGTCCGCAGCTCCTGCATCCTGGACGTCAGCCTATTCCCATTCGACGTTC AGAGATGTCCGTTAGAGTTCGGCTCCTGGACCTATCATGGCGGACAGATC AATCTACTAAACGTGTCGGCTGAAGGAGTTACTGACGAGTTCATCGAAAA CGGAGAATGGATCCTGAGGTCGTTTGAAGCAGATCGACACGTACACAGAA ATATTTCGGGAAAACCCTTCCCAACGATCGAGTACACCGTAGAAATATCG CGCAGGACACTGTACTACATTTACTACGTGGTGGCACCGAGTTTCCTCCT TGCGCTGCTGGCTCTTTTGGGGTTTTACCTGCCATCGGATTCCGGGGAGA AGTTGTCACTGAGCATCACGATGTTGTTAGCCCTGATCGTCTTCATGCAG TTGGTCACAGAGAAACTTCCCCCGATATCTACAAGCATACCACTGATAGG AAAGTTCTTCGGAGGGGTCATCGTGTTGGTGACCCTATCGTCGGCCATGA CCATCTTTGTCCTCAGCCTCCACTACCGTGGCCCGAAAATCTACCCCATC CCGCAGTGGGTTCGTAAAGTGTTCTTCCTGGGCCCTACGAAAGTGGGGAA GGTCAAGGTCATCACCAACCCAGGTGCACACACCGTGAAGATGAACGGCG TTCCAGGAGAGACTACGCCATCCAACCCTGAGACTCAGACACTCTCACGT ACTCTCGCGAGAATTGAACAAAGCATCTCCCATTTCGTAGAAGATCACGA GAAGAAGTCACAGTACATCGCCCTGGAGAAGGAATGGAAGTTCCTGGCAA AACGGATCGACAGGTGCCTCCTAGCGTTCTTCATGGTTGCTTTAGTCATC ATGACCCTTGTTGTGCTTCTCGCTCGCTAGATGAACTTTTACAGCGTATC ATACTTGATTCCGAGCACAGGTGGAACGGTCCCTGAAAACGTCCTGATTA CCAAGCTGCTAGAGAACTACTCTACCGACGCGCGGCCAGTTCTCAACTCT TTGGACACCACCACCGTTCACTTTGACATCGTCATAGCACAGATTCTAGA GCTGAATGCAAAGGAGCAGGTCCTGACATCAAATGTATGGATACGCCAGA GATGGGTTGACGAGGTTCTCAAGTGGAACCCTGAAGAGAACGGCAACATC ACGGTTGTGCACATCAACAGCGAGAACATATGGCGGCCAGATACAATCCT GTACAACAGGCTTCACGATGAAGGCTGGTCGGCCACTCCGGACACGAATG CCATCATCGAGCACACCGGCGAAGTGTTCTGGCCATATCCGGTCACCGTC CGCAGCTCCTGCATCCTGGACGTCAGCCTATTCCCATTCGACGTTCAGAG ATGTCCGTTAGAGTTCGGCTCCTGGACCTATCATGGCGGACAGATCAATC TACTAAACGTGTCGGCTGAAGGAGTTACTGACGAGTTCATCGAAAACGGA GAATGGATCCTGAGGTCGTTTGAAGCAGATCGACACGTACACAGAAATAT TTCGGGAAAACCCTTCCCAACGATCGAGTACACCGTAGAAATATCGCGCA GGACACTGTACTACATTTACTACGTGGTGGCACCGAGTTTCCTCCTTGCG CTGCTGGCTCTTTTGGGGTTTTACCTGCCATCGGATTCCGGGGAGAAGTT GTCACTGAGCATCACGATGTTGTTAGCCCTGATCGTCTTCATGCAGTTGG TCACAGAGAAACTTCCCCCGATATCTACAAGCATACCACTGATAGGAAAG TTCTTCGGAGGGGTCATCGTGTTGGTGACCCTATCGTCGGCCATGACCAT CTTTGTCCTCAGCCTCCACTACCGTGGCCCGAAAATCTACCCCATCCCGC AGTGGGTTCGTAAAGTGTTCTTCCTGGGCCCTACGAAAGTGGGGAAGGTC AAGGTCATCACCAACCCAGGTGCACACACCGTGAAGATGAACGGCGTTCC AGGAGAGACTACGCCATCCAACCCTGAGACTCAGACACTCTCACGTACTC TCGCGAGAATTGAACAAAGCATCTCCCATTTCGTAGAAGATCACGAGAAG AAGTCACAGTACATCGCCCTGGAGAAGGAATGGAAGTTCCTGGCAAAACG GATCGACAGGTGCCTCCTAGCGTTCTTCATGGTTGCTTTAGTCATCATGA CCCTTGTTGTGCTTCTCGCTCGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| Sc0000017 | genome | Sc0000017:3900167..3902658 - |
Properties
| Property Name | Value |
| Transcript id | BL95300_evm1 |
| Biotype | protein_coding |
|