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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95299_evm2 >transcript:BL95299_evm2-protein ID=transcript:BL95299_evm2-protein|Name=transcript:BL95299_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=385bp
MTDYNSGVRPKINSTEAIAVYLDVVLHQIIEVVSKSQLLITNLRVKQYWR
DEFLVWNPAEFNGLSKIRIPSEQIWRPDIYLFNRQQEEEVVIPDTWAELN
HTGHVKWTYIITMRSTCLQRLLGFPHDEQVCPLQFGSWTNDIQALSLYNL
SSVGDISDTVQNEEWELVSMTAARNVELYSCCPHPYVDVMYYIKIIRRPL
YYYYYFVAPCVIIMVLTLVGFWLPPDCEEKLSLSITMLLSVVFYLQLLAE
KLPPDSNDVPVLGQFYAAILVIVGLSAFVTAATMNFHFPEPDRHPVPDWL
RRIALGDRPRPTPGIVLYPRDDIENVIRCDSVASYSRDSETGEATVNQCN
GQHRPANQPSLSKTKTPSANGVKRNKMFSYQRMPE Run BLAST on NCBI mRNA from alignment at Sc0000017:3885204..3888152- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95299_evm2 ID=transcript:BL95299_evm2|Name=transcript:BL95299_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2949bp|location=Sequence derived from alignment at Sc0000017:3885204..3888152- (Branchiostoma lanceolatum)
ATGACGGACTACAACTCCGGAGTGAGACCCAAGATCAACAGTACGGAGGC
GATAGCGGTGTACCTGGACGTTGTTTTGCATCAGATCATAGAAGTGGTGA
GTTGTGTGGACACTTTTGTCATTCTAATTCAAATTCAGATGATGTTGTTA
CATTCAGAACAGACTGGATAGAATAGATTACGGTTCCGTCGTTAATTTGT
TGTACTTTCGTTAGAAAACATTGACATAGTTGGTATAACCTAATATGAAA
CATACGGATTTTTATGATAGATGTACAGGAAATTAAAGTATGGTGAGTTG
TTATCCTTGTATTAGATATAGGAAAGTAAGGCTGATGACCTATTTTTTGT
GCCGTTTTCTTTTCTTTTTTAGGTCTCCAAAAGCCAGTTGCTCATCACAA
ATCTACGAGTTAAACAGGTAATCAAATCATATCTCTTTATGCTAGTTAAC
CTACGTTAGAAATTAAAGTAACAATTAAGCATCATGTCTAATTTTTAGTG
GAACTGCAATGCCATAACTGACCGATGGGCGTCGCTTCTCTCCCCAGTAC
TGGAGAGACGAGTTCCTAGTCTGGAATCCCGCTGAGTTCAACGGCCTCAG
TAAGATCAGGATCCCAAGTGAACAAATATGGCGGCCCGACATATACCTCT
TCAACAGGTGATTAATAATGATGAAAATAATAATAAGACCCTATATGTTT
AATTTAGTGTTTGTTGTACGTTTGATAATAATTTCTTCATTCATTCATTC
ATTCTTTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCAC
TCACTCACTCACTCACTCTCTCATGCCCTTTTGCTTCGGTGCCCATGTAG
GGTGTGTAGCTCCAGCCGAGCCCCGAAGCCAGAAATCTGTCCCGGTGAAC
TGCCGGATACCTGAGGGGTACCTCTCAGTGTTCTCACGATTAGCTTACGG
TGTCAATTTGCTACCGGGTCCAGGGTTGATTTTACCTCCGAGTTTAAAAA
AAATTAGGGGCCCGGCCGTGTCCCAAAATAGCCTGGTAGCCACAGAGTCT
CCCACGGGGCCACGTAGGTGTCACGCCCGATAGTGCAAAATAAAGAATGA
AATAGCCCGTAAACTACCCGGCGGGGCCCCTTTTTCCAACTGTGACAGTA
GCATTACTCATTCTGTGCTGTGTACCCAGACAACAGGAAGAAGAAGTGGT
CATACCGGACACGTGGGCGGAGTTAAACCACACAGGTCACGTGAAGTGGA
CATACATCATCACCATGAGGAGCACCTGTCTGCAACGTCTGCTGGGATTT
CCCCATGACGAACAGGTAACGATACAGGAAAATGGAAAAACAACAGTCCC
TAAAATAACACTTTAATACATATTAAGTCTACACTAATTTGATTATATGG
ATGGCATCATTTGGGAACCCCAAACTGGTGCGAACGTGCGAAAAAAAGAA
AAGTTGGGACGAAAAAATTTTCCTTCATTAAATTATGAGTGGTCAGGAAG
GTTGAACAATTTACCGAACACACAGAACATGAAATTTTCAATGTGCAAGG
GGTAAGTTTATGACTAAATAAGTACTTTTTGGCTATAGTAAAATAGCTTT
TGCCATTTATGGCATAATATTTTTTTCCATTTTGCAGCTTCTATGTATGA
TTTACAGTATGGTTGAAACTTTTTGTTTGAAACGATGTGCTATATTTATA
TTAGCTATTGAATGTAGCTTAAAGCGTTGTAAGAATGGTTCCATTTCTTG
TTTTCAAAATGTCATACGTATTCGTATAAGAGTTGTATAGATGCGTAAAT
CAGGAAAATACACCAACGCATGATTTAAGCAAAGACAAATACCATTTCTC
GTGCTGTGCACACAAACAGGACTCTGGCATTTTTTCTTTCCTTGCAGGTT
TGCCCTCTACAATTCGGCTCCTGGACCAACGACATTCAAGCCCTAAGTCT
TTACAACTTGTCCTCAGTCGGCGACATCAGTGATACCGTACAGAACGAAG
AATGGGAACTTGTGTCCATGACAGCCGCCCGAAACGTCGAACTGTATAGC
TGTTGTCCCCACCCTTACGTTGACGTGATGTACTATATCAAAATAATACG
CCGTCCTCTTTACTACTACTACTATTTCGTGGCCCCTTGTGTCATCATAA
TGGTTTTGACTCTGGTGGGATTTTGGCTACCACCGGATTGTGAGGAAAAG
TTGTCGTTGAGTATCACCATGCTGCTTTCGGTCGTGTTTTATCTTCAACT
GTTAGCCGAAAAACTTCCGCCGGATTCCAACGATGTTCCTGTGCTAGGTA
AGATATTATAGTTATCTGTTTTCATCGTCAATATCTTTGATTTTGCACGT
AATTTTTTTTCCATAGTCCAATATTACATTGCGAGGTGATGTCACCCTAA
ATTTGTGTAGTGCGCATGCGCAGTCCAACGCCATCTTGGTATCCCACGGT
GCATGGCGCTCAGTATATCTATCTATCAGTTTCTATATACTAGTATAAGA
ATCGGGTTTGAATGAGTTTATATGATAGGTAATTTGTGAAAAATATGAGT
ATGACTTTTATTCTTTTTTCGCCCGCCAGGTCAATTCTATGCGGCCATAT
TGGTCATCGTGGGACTCTCAGCATTCGTGACGGCTGCAACCATGAACTTC
CACTTTCCCGAACCGGACAGACACCCTGTTCCCGATTGGTTGAGACGGAT
AGCTCTCGGGGATAGGCCTAGGCCAACTCCCGGAATTGTCTTATATCCTC
GTGATGACATTGAGAATGTCATTCGCTGTGACAGCGTAGCTAGTTATAGT
CGAGACAGTGAAACCGGGGAGGCAACTGTCAATCAATGTAACGGACAACA
CCGTCCAGCCAATCAGCCATCGTTGTCTAAAACGAAAACGCCATCAGCCA
ATGGCGTCAAACGTAACAAAATGTTTTCCTATCAAAGAATGCCGGAGAC Coding sequence (CDS) from alignment at Sc0000017:3885204..3888152- >transcript:BL95299_evm2 ID=transcript:BL95299_evm2|Name=transcript:BL95299_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=6942bp|location=Sequence derived from alignment at Sc0000017:3885204..3888152- (Branchiostoma lanceolatum)
ATGACGGACTACAACTCCGGAGTGAGACCCAAGATCAACAGTACGGAGGC
GATAGCGGTGTACCTGGACGTTGTTTTGCATCAGATCATAGAAGTGGTCT
CCAAAAGCCAGTTGCTCATCACAAATCTACGAGTTAAACAGTACTGGAGA
GACGAGTTCCTAGTCTGGAATCCCGCTGAGTTCAACGGCCTCAGTAAGAT
CAGGATCCCAAGTGAACAAATATGGCGGCCCGACATATACCTCTTCAACA
GACAACAGGAAGAAGAAGTGGTCATACCGGACACGTGGGCGGAGTTAAAC
CACACAGGTCACGTGAAGTGGACATACATCATCACCATGAGGAGCACCTG
TCTGCAACGTCTGCTGGGATTTCCCCATGACGAACAGGTTTGCCCTCTAC
AATTCGGCTCCTGGACCAACGACATTCAAGCCCTAAGTCTTTACAACTTG
TCCTCAGTCGGCGACATCAGTGATACCGTACAGAACGAAGAATGGGAACT
TGTGTCCATGACAGCCGCCCGAAACGTCGAACTGTATAGCTGTTGTCCCC
ACCCTTACGTTGACGTGATGTACTATATCAAAATAATACGCCGTCCTCTT
TACTACTACTACTATTTCGTGGCCCCTTGTGTCATCATAATGGTTTTGAC
TCTGGTGGGATTTTGGCTACCACCGGATTGTGAGGAAAAGTTGTCGTTGA
GTATCACCATGCTGCTTTCGGTCGTGTTTTATCTTCAACTGTTAGCCGAA
AAACTTCCGCCGGATTCCAACGATGTTCCTGTGCTAGGTCAATTCTATGC
GGCCATATTGGTCATCGTGGGACTCTCAGCATTCGTGACGGCTGCAACCA
TGAACTTCCACTTTCCCGAACCGGACAGACACCCTGTTCCCGATTGGTTG
AGACGGATAGCTCTCGGGGATAGGCCTAGGCCAACTCCCGGAATTGTCTT
ATATCCTCGTGATGACATTGAGAATGTCATTCGCTGTGACAGCGTAGCTA
GTTATAGTCGAGACAGTGAAACCGGGGAGGCAACTGTCAATCAATGTAAC
GGACAACACCGTCCAGCCAATCAGCCATCGTTGTCTAAAACGAAAACGCC
ATCAGCCAATGGCGTCAAACGTAACAAAATGTTTTCCTATCAAAGAATGC
CGGAGACATGACGGACTACAACTCCGGAGTGAGACCCAAGATCAACAGTA
CGGAGGCGATAGCGGTGTACCTGGACGTTGTTTTGCATCAGATCATAGAA
GTGGTCTCCAAAAGCCAGTTGCTCATCACAAATCTACGAGTTAAACAGTA
CTGGAGAGACGAGTTCCTAGTCTGGAATCCCGCTGAGTTCAACGGCCTCA
GTAAGATCAGGATCCCAAGTGAACAAATATGGCGGCCCGACATATACCTC
TTCAACAGACAACAGGAAGAAGAAGTGGTCATACCGGACACGTGGGCGGA
GTTAAACCACACAGGTCACGTGAAGTGGACATACATCATCACCATGAGGA
GCACCTGTCTGCAACGTCTGCTGGGATTTCCCCATGACGAACAGGTTTGC
CCTCTACAATTCGGCTCCTGGACCAACGACATTCAAGCCCTAAGTCTTTA
CAACTTGTCCTCAGTCGGCGACATCAGTGATACCGTACAGAACGAAGAAT
GGGAACTTGTGTCCATGACAGCCGCCCGAAACGTCGAACTGTATAGCTGT
TGTCCCCACCCTTACGTTGACGTGATGTACTATATCAAAATAATACGCCG
TCCTCTTTACTACTACTACTATTTCGTGGCCCCTTGTGTCATCATAATGG
TTTTGACTCTGGTGGGATTTTGGCTACCACCGGATTGTGAGGAAAAGTTG
TCGTTGAGTATCACCATGCTGCTTTCGGTCGTGTTTTATCTTCAACTGTT
AGCCGAAAAACTTCCGCCGGATTCCAACGATGTTCCTGTGCTAGGTCAAT
TCTATGCGGCCATATTGGTCATCGTGGGACTCTCAGCATTCGTGACGGCT
GCAACCATGAACTTCCACTTTCCCGAACCGGACAGACACCCTGTTCCCGA
TTGGTTGAGACGGATAGCTCTCGGGGATAGGCCTAGGCCAACTCCCGGAA
TTGTCTTATATCCTCGTGATGACATTGAGAATGTCATTCGCTGTGACAGC
GTAGCTAGTTATAGTCGAGACAGTGAAACCGGGGAGGCAACTGTCAATCA
ATGTAACGGACAACACCGTCCAGCCAATCAGCCATCGTTGTCTAAAACGA
AAACGCCATCAGCCAATGGCGTCAAACGTAACAAAATGTTTTCCTATCAA
AGAATGCCGGAGACATGACGGACTACAACTCCGGAGTGAGACCCAAGATC
AACAGTACGGAGGCGATAGCGGTGTACCTGGACGTTGTTTTGCATCAGAT
CATAGAAGTGGTCTCCAAAAGCCAGTTGCTCATCACAAATCTACGAGTTA
AACAGTACTGGAGAGACGAGTTCCTAGTCTGGAATCCCGCTGAGTTCAAC
GGCCTCAGTAAGATCAGGATCCCAAGTGAACAAATATGGCGGCCCGACAT
ATACCTCTTCAACAGACAACAGGAAGAAGAAGTGGTCATACCGGACACGT
GGGCGGAGTTAAACCACACAGGTCACGTGAAGTGGACATACATCATCACC
ATGAGGAGCACCTGTCTGCAACGTCTGCTGGGATTTCCCCATGACGAACA
GGTTTGCCCTCTACAATTCGGCTCCTGGACCAACGACATTCAAGCCCTAA
GTCTTTACAACTTGTCCTCAGTCGGCGACATCAGTGATACCGTACAGAAC
GAAGAATGGGAACTTGTGTCCATGACAGCCGCCCGAAACGTCGAACTGTA
TAGCTGTTGTCCCCACCCTTACGTTGACGTGATGTACTATATCAAAATAA
TACGCCGTCCTCTTTACTACTACTACTATTTCGTGGCCCCTTGTGTCATC
ATAATGGTTTTGACTCTGGTGGGATTTTGGCTACCACCGGATTGTGAGGA
AAAGTTGTCGTTGAGTATCACCATGCTGCTTTCGGTCGTGTTTTATCTTC
AACTGTTAGCCGAAAAACTTCCGCCGGATTCCAACGATGTTCCTGTGCTA
GGTCAATTCTATGCGGCCATATTGGTCATCGTGGGACTCTCAGCATTCGT
GACGGCTGCAACCATGAACTTCCACTTTCCCGAACCGGACAGACACCCTG
TTCCCGATTGGTTGAGACGGATAGCTCTCGGGGATAGGCCTAGGCCAACT
CCCGGAATTGTCTTATATCCTCGTGATGACATTGAGAATGTCATTCGCTG
TGACAGCGTAGCTAGTTATAGTCGAGACAGTGAAACCGGGGAGGCAACTG
TCAATCAATGTAACGGACAACACCGTCCAGCCAATCAGCCATCGTTGTCT
AAAACGAAAACGCCATCAGCCAATGGCGTCAAACGTAACAAAATGTTTTC
CTATCAAAGAATGCCGGAGACATGACGGACTACAACTCCGGAGTGAGACC
CAAGATCAACAGTACGGAGGCGATAGCGGTGTACCTGGACGTTGTTTTGC
ATCAGATCATAGAAGTGGTCTCCAAAAGCCAGTTGCTCATCACAAATCTA
CGAGTTAAACAGTACTGGAGAGACGAGTTCCTAGTCTGGAATCCCGCTGA
GTTCAACGGCCTCAGTAAGATCAGGATCCCAAGTGAACAAATATGGCGGC
CCGACATATACCTCTTCAACAGACAACAGGAAGAAGAAGTGGTCATACCG
GACACGTGGGCGGAGTTAAACCACACAGGTCACGTGAAGTGGACATACAT
CATCACCATGAGGAGCACCTGTCTGCAACGTCTGCTGGGATTTCCCCATG
ACGAACAGGTTTGCCCTCTACAATTCGGCTCCTGGACCAACGACATTCAA
GCCCTAAGTCTTTACAACTTGTCCTCAGTCGGCGACATCAGTGATACCGT
ACAGAACGAAGAATGGGAACTTGTGTCCATGACAGCCGCCCGAAACGTCG
AACTGTATAGCTGTTGTCCCCACCCTTACGTTGACGTGATGTACTATATC
AAAATAATACGCCGTCCTCTTTACTACTACTACTATTTCGTGGCCCCTTG
TGTCATCATAATGGTTTTGACTCTGGTGGGATTTTGGCTACCACCGGATT
GTGAGGAAAAGTTGTCGTTGAGTATCACCATGCTGCTTTCGGTCGTGTTT
TATCTTCAACTGTTAGCCGAAAAACTTCCGCCGGATTCCAACGATGTTCC
TGTGCTAGGTCAATTCTATGCGGCCATATTGGTCATCGTGGGACTCTCAG
CATTCGTGACGGCTGCAACCATGAACTTCCACTTTCCCGAACCGGACAGA
CACCCTGTTCCCGATTGGTTGAGACGGATAGCTCTCGGGGATAGGCCTAG
GCCAACTCCCGGAATTGTCTTATATCCTCGTGATGACATTGAGAATGTCA
TTCGCTGTGACAGCGTAGCTAGTTATAGTCGAGACAGTGAAACCGGGGAG
GCAACTGTCAATCAATGTAACGGACAACACCGTCCAGCCAATCAGCCATC
GTTGTCTAAAACGAAAACGCCATCAGCCAATGGCGTCAAACGTAACAAAA
TGTTTTCCTATCAAAGAATGCCGGAGACATGACGGACTACAACTCCGGAG
TGAGACCCAAGATCAACAGTACGGAGGCGATAGCGGTGTACCTGGACGTT
GTTTTGCATCAGATCATAGAAGTGGTCTCCAAAAGCCAGTTGCTCATCAC
AAATCTACGAGTTAAACAGTACTGGAGAGACGAGTTCCTAGTCTGGAATC
CCGCTGAGTTCAACGGCCTCAGTAAGATCAGGATCCCAAGTGAACAAATA
TGGCGGCCCGACATATACCTCTTCAACAGACAACAGGAAGAAGAAGTGGT
CATACCGGACACGTGGGCGGAGTTAAACCACACAGGTCACGTGAAGTGGA
CATACATCATCACCATGAGGAGCACCTGTCTGCAACGTCTGCTGGGATTT
CCCCATGACGAACAGGTTTGCCCTCTACAATTCGGCTCCTGGACCAACGA
CATTCAAGCCCTAAGTCTTTACAACTTGTCCTCAGTCGGCGACATCAGTG
ATACCGTACAGAACGAAGAATGGGAACTTGTGTCCATGACAGCCGCCCGA
AACGTCGAACTGTATAGCTGTTGTCCCCACCCTTACGTTGACGTGATGTA
CTATATCAAAATAATACGCCGTCCTCTTTACTACTACTACTATTTCGTGG
CCCCTTGTGTCATCATAATGGTTTTGACTCTGGTGGGATTTTGGCTACCA
CCGGATTGTGAGGAAAAGTTGTCGTTGAGTATCACCATGCTGCTTTCGGT
CGTGTTTTATCTTCAACTGTTAGCCGAAAAACTTCCGCCGGATTCCAACG
ATGTTCCTGTGCTAGGTCAATTCTATGCGGCCATATTGGTCATCGTGGGA
CTCTCAGCATTCGTGACGGCTGCAACCATGAACTTCCACTTTCCCGAACC
GGACAGACACCCTGTTCCCGATTGGTTGAGACGGATAGCTCTCGGGGATA
GGCCTAGGCCAACTCCCGGAATTGTCTTATATCCTCGTGATGACATTGAG
AATGTCATTCGCTGTGACAGCGTAGCTAGTTATAGTCGAGACAGTGAAAC
CGGGGAGGCAACTGTCAATCAATGTAACGGACAACACCGTCCAGCCAATC
AGCCATCGTTGTCTAAAACGAAAACGCCATCAGCCAATGGCGTCAAACGT
AACAAAATGTTTTCCTATCAAAGAATGCCGGAGACATGACGGACTACAAC
TCCGGAGTGAGACCCAAGATCAACAGTACGGAGGCGATAGCGGTGTACCT
GGACGTTGTTTTGCATCAGATCATAGAAGTGGTCTCCAAAAGCCAGTTGC
TCATCACAAATCTACGAGTTAAACAGTACTGGAGAGACGAGTTCCTAGTC
TGGAATCCCGCTGAGTTCAACGGCCTCAGTAAGATCAGGATCCCAAGTGA
ACAAATATGGCGGCCCGACATATACCTCTTCAACAGACAACAGGAAGAAG
AAGTGGTCATACCGGACACGTGGGCGGAGTTAAACCACACAGGTCACGTG
AAGTGGACATACATCATCACCATGAGGAGCACCTGTCTGCAACGTCTGCT
GGGATTTCCCCATGACGAACAGGTTTGCCCTCTACAATTCGGCTCCTGGA
CCAACGACATTCAAGCCCTAAGTCTTTACAACTTGTCCTCAGTCGGCGAC
ATCAGTGATACCGTACAGAACGAAGAATGGGAACTTGTGTCCATGACAGC
CGCCCGAAACGTCGAACTGTATAGCTGTTGTCCCCACCCTTACGTTGACG
TGATGTACTATATCAAAATAATACGCCGTCCTCTTTACTACTACTACTAT
TTCGTGGCCCCTTGTGTCATCATAATGGTTTTGACTCTGGTGGGATTTTG
GCTACCACCGGATTGTGAGGAAAAGTTGTCGTTGAGTATCACCATGCTGC
TTTCGGTCGTGTTTTATCTTCAACTGTTAGCCGAAAAACTTCCGCCGGAT
TCCAACGATGTTCCTGTGCTAGGTCAATTCTATGCGGCCATATTGGTCAT
CGTGGGACTCTCAGCATTCGTGACGGCTGCAACCATGAACTTCCACTTTC
CCGAACCGGACAGACACCCTGTTCCCGATTGGTTGAGACGGATAGCTCTC
GGGGATAGGCCTAGGCCAACTCCCGGAATTGTCTTATATCCTCGTGATGA
CATTGAGAATGTCATTCGCTGTGACAGCGTAGCTAGTTATAGTCGAGACA
GTGAAACCGGGGAGGCAACTGTCAATCAATGTAACGGACAACACCGTCCA
GCCAATCAGCCATCGTTGTCTAAAACGAAAACGCCATCAGCCAATGGCGT
CAAACGTAACAAAATGTTTTCCTATCAAAGAATGCCGGAGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000017 | genome | Sc0000017:3885204..3888152 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95299_evm2 |
| Biotype | protein_coding |
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