|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95242_evm2 >transcript:BL95242_evm2-protein ID=transcript:BL95242_evm2-protein|Name=transcript:BL95242_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=155bp
MGHLPILEVDGTMICQSKAIARLIAKDTGMAGKTPLEEAQADMICDSLEE
FGEKMLLFLREKDENKKEELKKEFEEKTLPAALDQFEKLASAEGYFAGNS
LTWADVSFFAIYNFIDILMPGDHLKSYVNLSKVMGNVSSNPGIAKWLKER
PDSAF Run BLAST on NCBI mRNA from alignment at Sc0000014:4424573..4428421- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95242_evm2 ID=transcript:BL95242_evm2|Name=transcript:BL95242_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3849bp|location=Sequence derived from alignment at Sc0000014:4424573..4428421- (Branchiostoma lanceolatum)
ATGGGACACCTACCCATTTTGGAGGTTGACGGGACCATGATCTGTCAGAG
CAAGGCCATAGCGAGGCTGATCGCCAAGGACACCGGTACGTAAAAAAAAC
GACCAAAAAACTTTTCAAAGACGATTTCAATGACCAGTATATGAATGTAG
AGTATTTCAAGTCTATTCGTATCTTATGACAGGTCTTACTAAATATTCTA
AAAATTCAATTCTTAAAGCGAAAGAACAAAGAACTGAAGTTTTGGCAACT
ACTTGTAATATCTGTTTGTGCATTTAGCTAGACTAGAAGAATTTTGCGAA
TTGTAAATTTGTTTTTAAGATGTCGGGTTTGGTTGTAAAAGGTATTTTGA
ATTGTCCATTTCACTGTTTACACATGAACTGTGATCAGGTGATGCGCTCG
TGTTCAAGGTCATTCCAGATCACGCATGTAAAGTAACTCTTTGACGTTTT
TTTTTCTCTTCGAGGGGTGGTGTGTATGCAAAAATGTATTTTCTACACAA
GATATTCAGCTAGTAGCTTGTTGAAACAGGTTTTGTGTAGAAATCCTATG
GGGAGGGACCGGTTAATGGTCATGCGCACAAAGCCCAGTTTGCATGTCCC
CGTTTTTTTTTTGGTTATAATTATTTTTGAGAATTTTTCCTTGTGAAATC
TTTAGTCAATTTTGGCCAGTTTTCAGGCAGGGAGACCAGACATGTATTCA
CTTTTTTAAAATCCAGAAAGAAATTGTGACCTTTGACATTTGTTGTGGTA
TAGAATAACATCTTTTGGGAAGGGGTTTTCCCCCTACTAGTCCAGTGTTT
CCCAGCTGCAGGGGGTAAGATCAGTGTTTGTTTACATTCAAACAGGTCTA
GTGCGTCAGAACGCAGGAGTCGAACCCCGGCTTTTTTTTTCAAAAACGGC
AACTAGACATGTTAAGAATATAGTGGGTGGAAATTTTGGACATTGAAATA
CTGTTAAGTGTTCTTTGAAGCCAGTTTTTGTTCCTTGTTTTGTACATAAT
CCTATGGACGTTTGTTTAGGCACTCCCTCCCCCTATGCAAATCTCCCAGT
ATGAATCTAAGCGCCCCCTATCGTTGTGTACAGGTATGGCAGGGAAGACG
CCACTAGAGGAGGCTCAAGCAGACATGATCTGTGACAGTCTGGAGGAGTT
CGGGGAAAAGATGCTACTTTTCTTGAGGGAGAAGGACGAAAATAAGAAAG
TAGGTCCAAGCATCCGTAATGAACACGTAGCAATTGTTATCGTTATTTTA
GATATGTACTTGGATTGGTGTAATATGTTAATTTTATTGATATTCGGTTT
GCGGGTAGCTTAGATAGAGATGAACAGGTCAATGAGATGCAAATTATACA
AATGTCGCATATATGAGAAAATTCTACAATGTCATTGTTTTTCATAATTG
GACTTTAATACATGTAACGTATGTTATCTATGGCACGTCGAACATAAAAA
CACATTATGCAAATAAAGCCCTACTTTGTATAACTAAAGCAAGAATAACA
TTGTTCATCCAAGTGTAGATGAGAGGAATGTTAACACGCTAACATGTGTA
AGTTAAAGGTGTACATAACCATGCACGACTATGTTGATGTGGAAGTCCTC
TGCATTATAAAAAATATTTGATTGAGGTGTAAGGTCTCTGAACTCTTGTT
TTTCCAGGAAGAACTAAAGAAAGAGTTTGAAGAGAAGACATTACCGGCTG
CTCTAGACCAATTTGAAAAGCTTGCGAGCGCGGAGGGATACTTCGCCGGG
AACTCGGTACGTATTTGTTGATTACAGCTCACACTTCATGTGTTGCCGTT
ATTTCACGGTTCAGATTTACAAGGCATTGTTATAAAGGGAATATTCTAAA
TGATCTCCCTTAACATTCTATAAATCACATGAATATAGTGGCAGGAAAAC
ATAGCGGTCGGGGGAAATGGAGTAGGTCACGGCACTTAATTTAAACGGTG
GCTTAAATATAAGTGATCAAATATTAGCGATGATGAAATTTTAGCTATTG
ACTAGTGACAGTTAAATCAGCTAAGATTAAGTTACAGTTAACAAATCAAG
AATAACATGTATCATGTATTGCGGCCAGCAGATAAGAAAAAGATTTAGGG
GCCCAAGATACTAGGAGGACATGTGCACCTGAAGAAGTTTAATGTGGTAG
ATGATATATGAATGGTTTATTCAGGAATTGAAACATACAGAAATCAAAAC
AGCATTGCAGCCGATGTAACCTTTTTTAAAGTAAACCGGCTGAATTGCGC
AGTCAAAAGTACGAAAGAGCACGCTCAAACAATCGGAAAATATATACAAA
AGACCAAATGTACAACCAACAGTAGCATGTATAAAAGATTACACCTTACA
ATATGGTGTTCAGTAGTTGGATTAAGGATGGAATAGCACTACGTTTGTAT
CTGTCTGATCTCGTGAAAGGAATGGTAAGCTGTAACCTCCCCCGTTTATT
TGGGGTTTCAATTGGAGGCTGCGCACCCTCGAGTCTAGGTACTGTCTCTT
CCAGGGAAGTATTCCGAAGTAAATCAACTGTGTATGGGATGAAAGCCTAT
CCCTTCCGCTATAGGACCAGCTGAGTTCTGTTTCTTCAACCTCTCTAATT
TTGGTAAATCAGGAGACAAAAACATAATTTTCACGTCAAAAACGATGGTC
AAATTTTGGCACTTTTGCGTAGGATAAAACTCGTAGAAAAAATTTTCTAG
GTAGAAACGACTGATGTTGTCAGAAAGAGAAAAACCTAGCGTACAGTCGA
GCCAATTATAAAGAAAATTCTAGTACTTAGATTTCTTTAATCATCCACGG
CGCGAGGCATGTCAGCATGACCCACAGAACGCAACAAAGGTCAATCTCCG
GCCAAGGGACATTTCACCATCAACGCGGATGGATATCCGGAAGTAAGGCT
CAGATCGAAACGCAATTTTCACCCAAAACACACCAATTCATACGCTTTTC
AGCCATGCTAGTATCTAATGTCAGTTCGAAGCACATTATGAGAAATCTAA
ACTCAAACCCAGCCCCTCGAAACCCTTCCGTCACTTTTTTGTCGCGCACT
TCTGTGGACCCCGGTCGCGGAAGAACTGGGGTGTGCACCGTTAAGCCCTT
ATTGTGGACTGTTTCACGAGTTGGAGGTAGCCAGGCTGGAAAAGTTTTAT
AATTCAATCGGGATTTAGCACATTTGAGACATAATGTCTATCTTCTATGT
AAAGGTAAAGGTTCAAACAATACGAGAATTTCAATGAAATATCATAAAAC
AAGTAGCATGAAAATAAGTCCGCCAAAACAGCCTACTACTGTTGCCTAAA
GGAACAATGTTTATCTTTATTCCATTTTCATTTTCTGCGGGGATTTTCAT
TTTCTGTGGGTATTTTAGCTTTCGTGAGCATAATATTTTTTTGGGTATTT
CATGTTCTGTGGGTATGTGATTTTACAGTAGGTTTCTGCTTTTTGTGGGT
TATTCATTTTCTGTGACTATTTAGTTTTTACCCACAGAAAAGTTAAATAC
CCATGGAAATAAAAATACACAAAGTTGAATAAAAACGCAAAAAAGACAAT
AATCACAAAAATGATAATGCCCACCTAAATTAAAAATGGCCACAGAAAAT
GAAATGGGATAAAAATAAACATTGTACCTGTGAGCCACCGTATGTTAACC
TCATCCCTCCTCTTCCTCCCTCCCACTACAGCTGACCTGGGCTGACGTCA
GCTTCTTCGCCATCTACAACTTCATAGATATCCTCATGCCGGGGGACCAT
CTCAAAAGTTACGTCAACCTGAGCAAGGTCATGGGCAACGTCTCGTCTAA
CCCGGGCATCGCGAAATGGCTGAAGGAGAGACCGGACTCTGCATTTTGA Coding sequence (CDS) from alignment at Sc0000014:4424573..4428421- >transcript:BL95242_evm2 ID=transcript:BL95242_evm2|Name=transcript:BL95242_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1872bp|location=Sequence derived from alignment at Sc0000014:4424573..4428421- (Branchiostoma lanceolatum)
ATGGGACACCTACCCATTTTGGAGGTTGACGGGACCATGATCTGTCAGAG
CAAGGCCATAGCGAGGCTGATCGCCAAGGACACCGGTATGGCAGGGAAGA
CGCCACTAGAGGAGGCTCAAGCAGACATGATCTGTGACAGTCTGGAGGAG
TTCGGGGAAAAGATGCTACTTTTCTTGAGGGAGAAGGACGAAAATAAGAA
AGAAGAACTAAAGAAAGAGTTTGAAGAGAAGACATTACCGGCTGCTCTAG
ACCAATTTGAAAAGCTTGCGAGCGCGGAGGGATACTTCGCCGGGAACTCG
CTGACCTGGGCTGACGTCAGCTTCTTCGCCATCTACAACTTCATAGATAT
CCTCATGCCGGGGGACCATCTCAAAAGTTACGTCAACCTGAGCAAGGTCA
TGGGCAACGTCTCGTCTAACCCGGGCATCGCGAAATGGCTGAAGGAGAGA
CCGGACTCTGCATTTTGAATGGGACACCTACCCATTTTGGAGGTTGACGG
GACCATGATCTGTCAGAGCAAGGCCATAGCGAGGCTGATCGCCAAGGACA
CCGGTATGGCAGGGAAGACGCCACTAGAGGAGGCTCAAGCAGACATGATC
TGTGACAGTCTGGAGGAGTTCGGGGAAAAGATGCTACTTTTCTTGAGGGA
GAAGGACGAAAATAAGAAAGAAGAACTAAAGAAAGAGTTTGAAGAGAAGA
CATTACCGGCTGCTCTAGACCAATTTGAAAAGCTTGCGAGCGCGGAGGGA
TACTTCGCCGGGAACTCGCTGACCTGGGCTGACGTCAGCTTCTTCGCCAT
CTACAACTTCATAGATATCCTCATGCCGGGGGACCATCTCAAAAGTTACG
TCAACCTGAGCAAGGTCATGGGCAACGTCTCGTCTAACCCGGGCATCGCG
AAATGGCTGAAGGAGAGACCGGACTCTGCATTTTGAATGGGACACCTACC
CATTTTGGAGGTTGACGGGACCATGATCTGTCAGAGCAAGGCCATAGCGA
GGCTGATCGCCAAGGACACCGGTATGGCAGGGAAGACGCCACTAGAGGAG
GCTCAAGCAGACATGATCTGTGACAGTCTGGAGGAGTTCGGGGAAAAGAT
GCTACTTTTCTTGAGGGAGAAGGACGAAAATAAGAAAGAAGAACTAAAGA
AAGAGTTTGAAGAGAAGACATTACCGGCTGCTCTAGACCAATTTGAAAAG
CTTGCGAGCGCGGAGGGATACTTCGCCGGGAACTCGCTGACCTGGGCTGA
CGTCAGCTTCTTCGCCATCTACAACTTCATAGATATCCTCATGCCGGGGG
ACCATCTCAAAAGTTACGTCAACCTGAGCAAGGTCATGGGCAACGTCTCG
TCTAACCCGGGCATCGCGAAATGGCTGAAGGAGAGACCGGACTCTGCATT
TTGAATGGGACACCTACCCATTTTGGAGGTTGACGGGACCATGATCTGTC
AGAGCAAGGCCATAGCGAGGCTGATCGCCAAGGACACCGGTATGGCAGGG
AAGACGCCACTAGAGGAGGCTCAAGCAGACATGATCTGTGACAGTCTGGA
GGAGTTCGGGGAAAAGATGCTACTTTTCTTGAGGGAGAAGGACGAAAATA
AGAAAGAAGAACTAAAGAAAGAGTTTGAAGAGAAGACATTACCGGCTGCT
CTAGACCAATTTGAAAAGCTTGCGAGCGCGGAGGGATACTTCGCCGGGAA
CTCGCTGACCTGGGCTGACGTCAGCTTCTTCGCCATCTACAACTTCATAG
ATATCCTCATGCCGGGGGACCATCTCAAAAGTTACGTCAACCTGAGCAAG
GTCATGGGCAACGTCTCGTCTAACCCGGGCATCGCGAAATGGCTGAAGGA
GAGACCGGACTCTGCATTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000014 | genome | Sc0000014:4424573..4428421 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95242_evm2 |
| Biotype | protein_coding |
|
