transcript:BL95234_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95234_evm0
Unique Nametranscript:BL95234_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95234_evm0

>transcript:BL95234_evm0-protein ID=transcript:BL95234_evm0-protein|Name=transcript:BL95234_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
MFAGALVTATLLAMLAVPGEARKCYMCVGLGGPEIKHSTPCSYNYLLLGM
QDCPDGHDFCYIQQSTPRDSSIPHAVDRGCAKEAKTPYCVNQGSARHCYS
WCGADGCNSAAGIKPLTLSITICFILATICMWIRG
Run BLAST on NCBI

mRNA from alignment at Sc0000013:2697179..2698643-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95234_evm0 ID=transcript:BL95234_evm0|Name=transcript:BL95234_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1465bp|location=Sequence derived from alignment at Sc0000013:2697179..2698643- (Branchiostoma lanceolatum)
ATGTTTGCGGGAGCCTTGGTTACTGCTACCCTGCTAGCTATGCTGGCTGT GCCAGGTAACTTCTCCGCTATATGCACCAAGGACACACGCTAACGTTACG TTTCGTCCAATGTAGATACATATGTATGTTGTATCGTGTAAGCAAGCCAC AAAATTCGACTAGACGTTTAGAAATTGTTGCCAAGATTTGCCATGCCCAT CGATGTTTACTGTAGTCGAAATGATTCACTGTCAGTTTTTGCAGCAATTC ATGTATAAACACATGTATACGTAGAAAACCGGGGGTCAGGAGAATATATG ATAGCAAAATCGAGCACGAGTAAACGTTTCGTTCAGTGAAATTCTGAAAA AGTAAACCACGTGCTTTTTCTAGTTACTTCACCCCCAAGTACCGATCTTG GTGTGCCTGTCTGTTTTTCTGTCCGTCGTTCATTCGTTTGATTGATTGTT GCGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT GTGCATGTGTGTGTGGTGTACGTGTGTGTGTGGTATGTACGTGTTTGTTT GTGTTAGTTTGTGTGAGTTAGTGTGTGTGTGTTTATTTGTGTATTTTCGT GTGTTTATGACCCACATGAAGTCTGCTATCTCTCATTGCCTTGTTGTTGT TTGCAGGCGAAGCTAGAAAGTGCTACATGTGTGTGGGTCTGGGAGGTCCT GAGATCAAGCATTCCACGCCTTGTTCCTACAACTACTTGCTTCTGGGCAT GCAGGACTGTCCTGACGGGCACGACTTCTGCTACATCCAACAGAGCACAC CCAGAGACTCAAGTAAGTACTGCAGCTCCGTCTATCAGGTTTTGTATTTT GATGATAGACTCGGGGAAACACGTGCGTGAGTGTATGTTAATGTTTGTGT GTTCATGTGTGTGTGTGTGTGTGCGTACGTGTACGTGCGTGTTTGTTTAT TTTGTCCTGATGTATGTTTGCATGTCTGCCTGAGTGTGAGGTCGTGTGCG TGTGTGTGTGTGTGTCTGCGCGCGCGCGCTAACGAACCAACTAGCTAACG AACCAACTAAACAATTGATAGATCTAAATTGCATTTTAGGAAAACTAACA CCCCTACAATCACTGTGGTTTGTTCCGAGGTGGCACCCTCATACTCCCAT ACTTTAACAGTGGCTGACATGTCCTTGGTGCTGAACTGACATCGCAGCAG TGTTTGCGCGTGTTCATATCACATGTTCTAGGAGGGTATTTTCTAATCTC TCTCGTTCCTTGCTGTAGGCATCCCCCATGCCGTGGACAGAGGCTGCGCA AAGGAAGCTAAGACTCCATACTGTGTGAACCAAGGTTCTGCCCGGCACTG CTACTCCTGGTGTGGCGCGGATGGCTGTAACTCCGCTGCTGGAATCAAAC CCCTGACCCTTAGTATCACCATATGCTTCATCCTCGCCACCATCTGTATG TGGATACGAGGGTAA

Coding sequence (CDS) from alignment at Sc0000013:2697179..2698643-

>transcript:BL95234_evm0 ID=transcript:BL95234_evm0|Name=transcript:BL95234_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1224bp|location=Sequence derived from alignment at Sc0000013:2697179..2698643- (Branchiostoma lanceolatum)
ATGTTTGCGGGAGCCTTGGTTACTGCTACCCTGCTAGCTATGCTGGCTGT
GCCAGGCGAAGCTAGAAAGTGCTACATGTGTGTGGGTCTGGGAGGTCCTG
AGATCAAGCATTCCACGCCTTGTTCCTACAACTACTTGCTTCTGGGCATG
CAGGACTGTCCTGACGGGCACGACTTCTGCTACATCCAACAGAGCACACC
CAGAGACTCAAGCATCCCCCATGCCGTGGACAGAGGCTGCGCAAAGGAAG
CTAAGACTCCATACTGTGTGAACCAAGGTTCTGCCCGGCACTGCTACTCC
TGGTGTGGCGCGGATGGCTGTAACTCCGCTGCTGGAATCAAACCCCTGAC
CCTTAGTATCACCATATGCTTCATCCTCGCCACCATCTGTATGTGGATAC
GAGGGTAAATGTTTGCGGGAGCCTTGGTTACTGCTACCCTGCTAGCTATG
CTGGCTGTGCCAGGCGAAGCTAGAAAGTGCTACATGTGTGTGGGTCTGGG
AGGTCCTGAGATCAAGCATTCCACGCCTTGTTCCTACAACTACTTGCTTC
TGGGCATGCAGGACTGTCCTGACGGGCACGACTTCTGCTACATCCAACAG
AGCACACCCAGAGACTCAAGCATCCCCCATGCCGTGGACAGAGGCTGCGC
AAAGGAAGCTAAGACTCCATACTGTGTGAACCAAGGTTCTGCCCGGCACT
GCTACTCCTGGTGTGGCGCGGATGGCTGTAACTCCGCTGCTGGAATCAAA
CCCCTGACCCTTAGTATCACCATATGCTTCATCCTCGCCACCATCTGTAT
GTGGATACGAGGGTAAATGTTTGCGGGAGCCTTGGTTACTGCTACCCTGC
TAGCTATGCTGGCTGTGCCAGGCGAAGCTAGAAAGTGCTACATGTGTGTG
GGTCTGGGAGGTCCTGAGATCAAGCATTCCACGCCTTGTTCCTACAACTA
CTTGCTTCTGGGCATGCAGGACTGTCCTGACGGGCACGACTTCTGCTACA
TCCAACAGAGCACACCCAGAGACTCAAGCATCCCCCATGCCGTGGACAGA
GGCTGCGCAAAGGAAGCTAAGACTCCATACTGTGTGAACCAAGGTTCTGC
CCGGCACTGCTACTCCTGGTGTGGCGCGGATGGCTGTAACTCCGCTGCTG
GAATCAAACCCCTGACCCTTAGTATCACCATATGCTTCATCCTCGCCACC
ATCTGTATGTGGATACGAGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95234gene:BL95234Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95234_evm0-E1BL95234_evm0-E1-1564476830-116630Branchiostoma lanceolatumexon
BL95234_evm0-E2BL95234_evm0-E2-1564476830-116628Branchiostoma lanceolatumexon
BL95234_evm0-E3BL95234_evm0-E3-1564476830-116626Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95234_evm0transcript:BL95234_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000013genomeSc0000013:2697179..2698643 -
Properties
Property NameValue
Transcript idBL95234_evm0
Biotypeprotein_coding