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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95225_evm1 >transcript:BL95225_evm1-protein ID=transcript:BL95225_evm1-protein|Name=transcript:BL95225_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=356bp
MCKRRKERKQREEMVVVDGSNPDFEDYNIQSEALLGGGYTTTDNESMTSD
PNTRRNPPKRTRSMSAPSLFRKISRQASLESKYFDLGQLDFAVQHKVEEK
QLEVYLIKAERLTPRTSKELRDPYVIVKLLPDIRRRKQSKIILDDLHPDF
DELFTFDVDGEDIGTLTLKFHVMDAGGKRKRRQEIGHVTFPLAGNDWSVQ
QEFWMNIVKMDPRIKVKASEADVLEADRGEMLLSLLHKPNSRLLTVVVEE
VNNVDPERDLSDPVFMPGRKKKHQASSKAALFVKVRFTEEGRKVKTVKTS
QKVGTTNPKFKETFTFDISKYNLAEVGLKXTARTGLVSRRIRTGIPPEIF
HIPVRI Run BLAST on NCBI mRNA from alignment at Sc0000013:1042550..1046945+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95225_evm1 ID=transcript:BL95225_evm1|Name=transcript:BL95225_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4396bp|location=Sequence derived from alignment at Sc0000013:1042550..1046945+ (Branchiostoma lanceolatum)
ATGTGCAAGAGAAGAAAAGAGAGGAAGCAGCGGGAAGAAATGGTGGTTGT
GGATGGATCAAATCCGGACTTTGAAGACTACAACATACAAAGTGAAGCTC
TTTTAGGAGGCGGCTACACCACGACGGATAACGAATCCATGACAAGCGAC
CCGAACACACGAAGAAACCCCCCAAAAAGGACGAGAAGCATGAGCGCTCC
TTCGCTGTTCCGAAAAATATCTCGACAAGCCAGTCTTGAATCAAAGTACT
TCGACCTCGGGCAACTCGACTTCGCAGTCCAACACAAGGTAGAAGAAAAA
CAACTCGAGGTCTACCTTATCAAAGCAGAACGCCTTACTCCAAGGACAAG
TAAAGAACTTCGCGACCCTTACGTCATCGTTAAACTCTTACCAGATATAA
GAAGAAGGAAGCAATCTAAGATTATCCTTGATGATCTTCATCCGGACTTC
GATGAACTGTTTACGTTTGACGTTGATGGAGAAGATATTGGAACGTTGAC
GTTGAAGTTTCACGTGATGGACGCTGGGGGGAAGAGGAAACGTAGACAGG
AGATCGGTCACGTGACGTTTCCTCTGGCAGGGAACGACTGGAGCGTTCAA
CAGGAGTTCTGGATGAACATAGTCAAGATGGACCCTCGTATCAAGGTATT
AATGATTACTTGAAGTTTATAAACTATGGATTGATATTTTTAAATACATA
TTAAATTTTAGACTGACTTACTATAATGATGAAAGCAACAATAGGCTACC
TACAAACCAAAATGATCATAACATTTCATTTATTCCCTTCATGAGGTCTT
CTCTTTCAAAATATCAGAGAAAATCTACCCCTGCAGTTCCACACATGCTA
GCGAGCCTAAACCTTTACTACCCCTTGTCAAGACCTAGAGTTACTTGCCT
TTTAAAACTCCTAGCTGCGCCCTATAGCATGTTCAGAATATGTAACCAAA
AAATGTTCTGCTGCAGCAGCATTGAAAGCCGTTAAAGGACCCGTGCACAC
AATCAAGCTTGCCCTTTGTTTTGTTGTCACATATGTTCTCCACAATTCTA
CAGGGAATGTATAGAAGGAAATTCAGAATTCTTGCAAAACGAATTTAATG
AAACACAATCTGCACCGCCTCTATGGTGTAGCCAGAACATTGATATCAGT
CCATCGGAGTATCATTCTAGCTGAACTAAAATGGTCTTTGACGAAGAATC
TCAGGGATTTTACATGCCATACCAATACTTCTGTGAGTTATAATATCTTG
TTTTGATGAAACATTCTATGCATTGCTTTTTCCACAGGTTAAAGCCTCCG
AGGCGGATGTTCTGGAGGCTGACCGGGGTGAGATGTTGCTGAGCCTGCTG
CACAAACCGAACTCTCGTCTCCTGACGGTGGTGGTGGAGGAGGTCAACAA
CGTCGACCCGGAGAGGGACCTGTCCGATCCGGTCTTCATGCCGGGGAGGA
AGAAGAAGCACCAGGCTTCAAGCAAAGGTACTGTGTCCGAATAGACATAC
CTTATACCTCTCCATGTAAAAGAGCCCAACACATATATAACGAATTAAGA
GTAGGCATGGCCGGTGTGACTAATTAAAGAGCTACCGACTTTAATTAAAA
TATAAACAGCTGTATTCTTCACTTAAATCTGAGAATGACTTTAAATTGTA
GTTTTCTAAGATAAGCACTAAAATTTGGCTTCAAATAGATGATATGACAT
AACGAAGCCACATAATCAAATGAACGACATTAATTATGGACTGTAAATAA
TATCCCTTTGTTGATAAAGAAATCCATCTTATAATCTAAAAGTTCTGAAA
AAGTTCTGAAAAAGTCTGTTGATACGTTAATGGTAACATTTTTGGTAACA
AGTCAACTTGAAATTATAATTACATGCATATAAGTCATATTGATATTGCT
TCACGTTCCCTTTGAAGTTGATGTNCGGCAGGTGGTATCGGTGCTCGCTG
CATTGAGGTAAGCTAACATTCTAATAGTTTGTAAAAGCTCATAGTACTTG
ACTGGCTAACATTAAAAACAGTTTAACAAGTATGTTATAGAACTAACAAG
TACGCAATAAAACTAACAGCATTGTTTTCAGTATGGGGGATAGGTAAACA
TACGTAAAGCCAATTTACTCAATAGCGATATACAACGTTAAAAGTTTCAT
TAGTTGGAACTGTTTTGTTAGATGTAGCATCTTTGACTCATTACAGAATA
CTAGTAAGAGGTTTGATAGCACTGTTTGATGACAGATGATGTAGCTGAAC
AACTAACGTTTTTTTTTCATCCTCGATGAGTAAATGAGTTGTCTGTACTT
TTTTCAAAGCGTTGTTAAATCAATAGCTGTAGGGTTTAAACGAGTTCTAG
TCAAAATAGCACAACAGCTGGTGAAATAAACGCTTTAAACAGGCGAAAAA
AACCTCCATAGATGTCTTTGAAGTAACATTTTTCGTGTATATGCTCGTAT
AGTTACATAAGGATATCATGTCCCACCGGAGCGGCCGCGGTGTGCTTATT
ATAGCGTAACTCACGATTTGATTAGGTAACAAAATGGCGAACTTACCTAT
AGTTTACTTGTTTACCGCCATATAAACAATAAGTAAATGAAGAAATTACA
AGTGGCTATTATTTTATAGCACCTAGTTATGGTTACTTCTACATACATTT
AGCTTAAGAGCACAGTATAGCATACGTAAGTTTGCCACGTGCTTCGACGT
ACTTTTTTTTCAAGATTCAGAACAAAATTTGATATGAAACACATATGAAC
AGATAAAGCTAACCAGGCTATTCTATCAACATGTTTAGAAAATGACAACT
TTTCGATGCATTTTGTCTAGAGTCGCAATGTAGCTTGATCAAATCCAATT
GCATGATTTTAATTAAAGCTGTTTTGGAATTTAGGATGAGGGGGCATTTT
CCTTTTAAATCGTCGCGGATACTAAAGCTAACAGTCTAGATAATTTTATA
CCACTGCCTATTTATACAGGGAGGGAATATATTGTATATGCTGGCGTGTT
TTTTTCCCTTCTTCTTCTTTATATATTTGTTGATTTAGATTTACCACATT
TGTGGAAGGATTGACATAACACCTTTTCATGATGGCAACCCAGACCAGAC
TGTAAGGTTTGGACCATCGCACACCGGAGCATGCCCCTACTCGTTTTTTC
TTTAAAAAAACTAAGTAGGGTGGTAGCTCTAATACTGATATTGCAGAAAT
GTATATTTCCCTTATGGTTGATGCTACGGATACCATATTGAGGAACTCAT
TTGCATCATTTATGCAGAAACTTTATATTTCCCTTCCGGCACATGCTACA
GATGTCATGTTGGAGGTGAAAGTAACCTTGGGTAAGGTGGAATGGAATGG
AATATACATTATTCAAATGAGGACCTCATTTGCATAATTAATGCAGCAAA
ATGTATTTCCCTCACGGTAAATGCTATGGATGTCATATTGGAGGTGTAGC
TTTTGAAAAGGTGAATACAACGGATTGTGAGTTATGCTTATGAGAACCTA
ATTTATGCAGCGAATATCCTGCATTTTCTTGAAAATATTGCCTTTCCAGT
TGATATGTGTGCTCCACGTGTATACACTGTTAAGTACATGTAACTTCAAA
GTCGAAGCCCCATCCAAAATACCCCGGCGCCGTTGAAGTTGATGTCTTAA
TAAGATTTCTTTCCAAAAAAGTATACTTAACAAATGTTCACCGTTTTCTT
CTTGTATAATGAGTAACATCAAAAGCATTTTCTTTCAGCTGCCCTTTTCG
TGAAGGTCAGATTCACAGAAGAAGGAAGAAAGGTGAAAACGGTGAAGACG
TCTCAGAAGGTCGGCACCACCAACCCCAAGTTCAAGGAAACTTTTACTTT
CGACATCTCCAAGTATAACCTTGCTGAGGTATGTAAAAGCTTGGATAAAT
TCTACACAACCTATGGCCATTTTTTTATAATACTATTGATATACATGTGT
ATATAATTTCTATCTTGAAGTAGTATTGTTACGGTAGCAGTATTGTTGTA
CTAGTAAATATACTTAGTAGCGGTACTATATTGCAGCTAACATGACTCTT
CCAAAGTAATCCAGATTGTTTAAAGGTATTGATAACTATTTGGCACAGCA
TACATTGGCTATAATTCCTGAAGACTTTTGTAAAAAGAAAAAAAGATAAG
CATATTTATCTATACAATGCCTTGCAATCCGTTTAAAGATTTTTGTACTT
TTCGTGCCCACTTACAGATATTCATATCATTTTTGCGGATATATCAAAAA
CAAAATAATGCCGTTTCAATATAGGTGTTTTTTTCTAACTTTCTCTCCAG
GTTGGACTTAAGTNCACTGCACGAACTGGCCTCGTATCCCGGCGTATACG
TACAGGGATTCCTCCGGAAATATTCCATATCCCGGTGCGGATTTAG Coding sequence (CDS) from alignment at Sc0000013:1042550..1046945+ >transcript:BL95225_evm1 ID=transcript:BL95225_evm1|Name=transcript:BL95225_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4284bp|location=Sequence derived from alignment at Sc0000013:1042550..1046945+ (Branchiostoma lanceolatum)
ATGTGCAAGAGAAGAAAAGAGAGGAAGCAGCGGGAAGAAATGGTGGTTGT
GGATGGATCAAATCCGGACTTTGAAGACTACAACATACAAAGTGAAGCTC
TTTTAGGAGGCGGCTACACCACGACGGATAACGAATCCATGACAAGCGAC
CCGAACACACGAAGAAACCCCCCAAAAAGGACGAGAAGCATGAGCGCTCC
TTCGCTGTTCCGAAAAATATCTCGACAAGCCAGTCTTGAATCAAAGTACT
TCGACCTCGGGCAACTCGACTTCGCAGTCCAACACAAGGTAGAAGAAAAA
CAACTCGAGGTCTACCTTATCAAAGCAGAACGCCTTACTCCAAGGACAAG
TAAAGAACTTCGCGACCCTTACGTCATCGTTAAACTCTTACCAGATATAA
GAAGAAGGAAGCAATCTAAGATTATCCTTGATGATCTTCATCCGGACTTC
GATGAACTGTTTACGTTTGACGTTGATGGAGAAGATATTGGAACGTTGAC
GTTGAAGTTTCACGTGATGGACGCTGGGGGGAAGAGGAAACGTAGACAGG
AGATCGGTCACGTGACGTTTCCTCTGGCAGGGAACGACTGGAGCGTTCAA
CAGGAGTTCTGGATGAACATAGTCAAGATGGACCCTCGTATCAAGGTTAA
AGCCTCCGAGGCGGATGTTCTGGAGGCTGACCGGGGTGAGATGTTGCTGA
GCCTGCTGCACAAACCGAACTCTCGTCTCCTGACGGTGGTGGTGGAGGAG
GTCAACAACGTCGACCCGGAGAGGGACCTGTCCGATCCGGTCTTCATGCC
GGGGAGGAAGAAGAAGCACCAGGCTTCAAGCAAAGCTGCCCTTTTCGTGA
AGGTCAGATTCACAGAAGAAGGAAGAAAGGTGAAAACGGTGAAGACGTCT
CAGAAGGTCGGCACCACCAACCCCAAGTTCAAGGAAACTTTTACTTTCGA
CATCTCCAAGTATAACCTTGCTGAGGTTGGACTTAAGTNCACTGCACGAA
CTGGCCTCGTATCCCGGCGTATACGTACAGGGATTCCTCCGGAAATATTC
CATATCCCGGTGCGGATTTAGATGTGCAAGAGAAGAAAAGAGAGGAAGCA
GCGGGAAGAAATGGTGGTTGTGGATGGATCAAATCCGGACTTTGAAGACT
ACAACATACAAAGTGAAGCTCTTTTAGGAGGCGGCTACACCACGACGGAT
AACGAATCCATGACAAGCGACCCGAACACACGAAGAAACCCCCCAAAAAG
GACGAGAAGCATGAGCGCTCCTTCGCTGTTCCGAAAAATATCTCGACAAG
CCAGTCTTGAATCAAAGTACTTCGACCTCGGGCAACTCGACTTCGCAGTC
CAACACAAGGTAGAAGAAAAACAACTCGAGGTCTACCTTATCAAAGCAGA
ACGCCTTACTCCAAGGACAAGTAAAGAACTTCGCGACCCTTACGTCATCG
TTAAACTCTTACCAGATATAAGAAGAAGGAAGCAATCTAAGATTATCCTT
GATGATCTTCATCCGGACTTCGATGAACTGTTTACGTTTGACGTTGATGG
AGAAGATATTGGAACGTTGACGTTGAAGTTTCACGTGATGGACGCTGGGG
GGAAGAGGAAACGTAGACAGGAGATCGGTCACGTGACGTTTCCTCTGGCA
GGGAACGACTGGAGCGTTCAACAGGAGTTCTGGATGAACATAGTCAAGAT
GGACCCTCGTATCAAGGTTAAAGCCTCCGAGGCGGATGTTCTGGAGGCTG
ACCGGGGTGAGATGTTGCTGAGCCTGCTGCACAAACCGAACTCTCGTCTC
CTGACGGTGGTGGTGGAGGAGGTCAACAACGTCGACCCGGAGAGGGACCT
GTCCGATCCGGTCTTCATGCCGGGGAGGAAGAAGAAGCACCAGGCTTCAA
GCAAAGCTGCCCTTTTCGTGAAGGTCAGATTCACAGAAGAAGGAAGAAAG
GTGAAAACGGTGAAGACGTCTCAGAAGGTCGGCACCACCAACCCCAAGTT
CAAGGAAACTTTTACTTTCGACATCTCCAAGTATAACCTTGCTGAGGTTG
GACTTAAGTNCACTGCACGAACTGGCCTCGTATCCCGGCGTATACGTACA
GGGATTCCTCCGGAAATATTCCATATCCCGGTGCGGATTTAGATGTGCAA
GAGAAGAAAAGAGAGGAAGCAGCGGGAAGAAATGGTGGTTGTGGATGGAT
CAAATCCGGACTTTGAAGACTACAACATACAAAGTGAAGCTCTTTTAGGA
GGCGGCTACACCACGACGGATAACGAATCCATGACAAGCGACCCGAACAC
ACGAAGAAACCCCCCAAAAAGGACGAGAAGCATGAGCGCTCCTTCGCTGT
TCCGAAAAATATCTCGACAAGCCAGTCTTGAATCAAAGTACTTCGACCTC
GGGCAACTCGACTTCGCAGTCCAACACAAGGTAGAAGAAAAACAACTCGA
GGTCTACCTTATCAAAGCAGAACGCCTTACTCCAAGGACAAGTAAAGAAC
TTCGCGACCCTTACGTCATCGTTAAACTCTTACCAGATATAAGAAGAAGG
AAGCAATCTAAGATTATCCTTGATGATCTTCATCCGGACTTCGATGAACT
GTTTACGTTTGACGTTGATGGAGAAGATATTGGAACGTTGACGTTGAAGT
TTCACGTGATGGACGCTGGGGGGAAGAGGAAACGTAGACAGGAGATCGGT
CACGTGACGTTTCCTCTGGCAGGGAACGACTGGAGCGTTCAACAGGAGTT
CTGGATGAACATAGTCAAGATGGACCCTCGTATCAAGGTTAAAGCCTCCG
AGGCGGATGTTCTGGAGGCTGACCGGGGTGAGATGTTGCTGAGCCTGCTG
CACAAACCGAACTCTCGTCTCCTGACGGTGGTGGTGGAGGAGGTCAACAA
CGTCGACCCGGAGAGGGACCTGTCCGATCCGGTCTTCATGCCGGGGAGGA
AGAAGAAGCACCAGGCTTCAAGCAAAGCTGCCCTTTTCGTGAAGGTCAGA
TTCACAGAAGAAGGAAGAAAGGTGAAAACGGTGAAGACGTCTCAGAAGGT
CGGCACCACCAACCCCAAGTTCAAGGAAACTTTTACTTTCGACATCTCCA
AGTATAACCTTGCTGAGGTTGGACTTAAGTNCACTGCACGAACTGGCCTC
GTATCCCGGCGTATACGTACAGGGATTCCTCCGGAAATATTCCATATCCC
GGTGCGGATTTAGATGTGCAAGAGAAGAAAAGAGAGGAAGCAGCGGGAAG
AAATGGTGGTTGTGGATGGATCAAATCCGGACTTTGAAGACTACAACATA
CAAAGTGAAGCTCTTTTAGGAGGCGGCTACACCACGACGGATAACGAATC
CATGACAAGCGACCCGAACACACGAAGAAACCCCCCAAAAAGGACGAGAA
GCATGAGCGCTCCTTCGCTGTTCCGAAAAATATCTCGACAAGCCAGTCTT
GAATCAAAGTACTTCGACCTCGGGCAACTCGACTTCGCAGTCCAACACAA
GGTAGAAGAAAAACAACTCGAGGTCTACCTTATCAAAGCAGAACGCCTTA
CTCCAAGGACAAGTAAAGAACTTCGCGACCCTTACGTCATCGTTAAACTC
TTACCAGATATAAGAAGAAGGAAGCAATCTAAGATTATCCTTGATGATCT
TCATCCGGACTTCGATGAACTGTTTACGTTTGACGTTGATGGAGAAGATA
TTGGAACGTTGACGTTGAAGTTTCACGTGATGGACGCTGGGGGGAAGAGG
AAACGTAGACAGGAGATCGGTCACGTGACGTTTCCTCTGGCAGGGAACGA
CTGGAGCGTTCAACAGGAGTTCTGGATGAACATAGTCAAGATGGACCCTC
GTATCAAGGTTAAAGCCTCCGAGGCGGATGTTCTGGAGGCTGACCGGGGT
GAGATGTTGCTGAGCCTGCTGCACAAACCGAACTCTCGTCTCCTGACGGT
GGTGGTGGAGGAGGTCAACAACGTCGACCCGGAGAGGGACCTGTCCGATC
CGGTCTTCATGCCGGGGAGGAAGAAGAAGCACCAGGCTTCAAGCAAAGCT
GCCCTTTTCGTGAAGGTCAGATTCACAGAAGAAGGAAGAAAGGTGAAAAC
GGTGAAGACGTCTCAGAAGGTCGGCACCACCAACCCCAAGTTCAAGGAAA
CTTTTACTTTCGACATCTCCAAGTATAACCTTGCTGAGGTTGGACTTAAG
TNCACTGCACGAACTGGCCTCGTATCCCGGCGTATACGTACAGGGATTCC
TCCGGAAATATTCCATATCCCGGTGCGGATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000013 | genome | Sc0000013:1042550..1046945 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95225_evm1 |
| Biotype | protein_coding |
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