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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95167_evm1 >transcript:BL95167_evm1-protein ID=transcript:BL95167_evm1-protein|Name=transcript:BL95167_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=237bp
MPKQPAAKKEEEAKNPFEGVDVKDPIVVRAATRIQAAFRSHKSRKELMEK
SLPSFTQELKDMFGYEGSATSFFCRVWGIPDPVITWYKDGELIKEGPKFQ
IGFDSKDGTTLTIQNVSREDVGQYTCKANNSHGEAFDSARLIVDIPAKVM
KPPENVTAKKGETITMRVEIEGDPEADVIWKHKKKEINEGGRYSYEDTDT
YSILRIQGATEEDAGKYEIEVENDMGKDRTFCAVSVK Run BLAST on NCBI mRNA from alignment at Sc0000008:6050144..6053269+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95167_evm1 ID=transcript:BL95167_evm1|Name=transcript:BL95167_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3126bp|location=Sequence derived from alignment at Sc0000008:6050144..6053269+ (Branchiostoma lanceolatum)
ATGCCGAAACAGGTGGGACAACGAAAGGCTTTCTTTAAATTTAAGCATGT
CGTTTTTGTGAAGATATCTTGTAACGAGCCATGTTTATCCATGTAGTGTT
ATTTCAACTGATGTCCTTTTTCAGTATCATTATGGTTGTTTAAATATCTA
TCTATGTGACGATACTTTGCGTTTAAACGTTTGGGACTGTATTGTTAGCA
GCGACGCCTAGCTGCAGTGCGGTCACCGAAACGTTGGTTGTTATGCTACG
CCCTGTTTGTGATAATAAAGAACTCTTTTGCTCCATCAATGTATATGTTT
GAGCCATGTTTCTACACTGATGTTAACTGAAATGCCCATTACCCACCCCC
TCTCCATACCCCTTCCCTCCCATGTTTCTACATTGATGTTAACTGGTGTG
CCCATTACCCACCCCCTCTCCATACCCCTCCCCTCCCATGTTTCTACATT
GATGTTAACTGGTGTGCCCATTACCCACCCCCTCTCGACAACCCCCCTCC
CCCTTCTCCATACCCCTTCCCTCCCATGTTTCTACATTGATGTTAACTGG
TGTGCCCATTACCCACCCCCTCTCCACCACCCCTCCCCCTTTTCCACGCA
GCCCGCGGCGAAGAAGGAGGAAGAGGCCAAGAACCCGTTTGAGGGGGTTG
ACGTGAAGGACCCGATCGTGGTCCGGGCCGCCACGCGCATCCAGGCGGCC
TTCCGCTCGCACAAGTCCCGCAAGGAGCTCATGGAGAAATCCCTGCCCAG
CTTCACACAGGTAAGGCCGGTCATCAACTATATCAGTGCATAATTGTGGA
TTAGTATTTGAAATGTGAATTCCTCAATGTGAATAAGGATTATACCATGG
TTAATACTGACCGACGGAGACAGATATAGAGCATATATGGCATTGAAAAT
CTCATGGGAAACAACTTGTGTCTGTTTTGTTGTCGTTCCCTTGGAAACTG
AAGACCATGTTTGTTACTGTAGAAACAATGGAATCTTAGGTTCGCGTTCT
CATAGGATCTGAAGGACATATTCGTTGCCATGTAAACCTTGTTTTGTGTG
CTCTCGTTGCCAGGAGCTGAAGGACATGCCCGTTGCCATGTGAACCACCG
AAATTTTGTTCTCGTTCCCATAGGATCCTAAAGCCATGTTCTCTACCACA
TTAACCGCGTATTTTTTCCACTCTCGTTCCCAGGAGCTGAAGGACATGTT
CGGGTACGAGGGCAGCGCCACCAGCTTCTTCTGCCGCGTGTGGGGCATCC
CCGACCCCGTCATCACGTGGTACAAGGACGGCGAGCTCATCAAGGAGGGA
CCCAAGTTTCAGATCGGATTCGATAGCAAGGGTACGTACAAACAAACAAA
CAAATAAATAAACAGGTCAACAGATAAGTAAACATCAAACCCAAACTGTC
AAACCCTCTTATGCGGTACACAAATTACTATACTTTTGCACAGATCACAG
AATTTAGACCGTCAAACGTCATACTTTTGCACAAATGACAGAATTCAAAC
TGTCAAACGATTTTTTGGCCGTAATGTCGTAGCTTTTCGCGCCCTTTTTT
CAGTTGTTACGACGCCGAGATTTTCTATTGCCAAAATCTCGCTTACAGCA
CAAAACTAACGTAATATTTCTGTCATACTTTTGTACAGATAACAAAATTC
AAACTTTACAATTATTTTTTTCCCGCGCTTTTTCTGCAGACGGCACGACG
CTGACGATCCAGAACGTGAGCCGGGAGGACGTGGGGCAGTACACCTGCAA
AGCCAACAACAGCCACGGGGAGGCGTTCGACTCCGCACGGCTCATCGTCG
ATAGTGAGTCACCAATCAATCAATACATCAATCAATTAAGCAATTGATCG
ATCGATCAACCAAACTATTATACGCCAAAAATAGTTACTCAAGCAACTGG
ATAAATTTTTCAAAACTTTTTTTGGCGTATCTTATTACCTGGATCGCTTC
ATCAACGAATCAAACTATTAATCTTTATTGCACGACAATAAGCCAGTTCG
TGGTTTCACTGCTCATGCGCGGGGTCAAAGGTTATGGATACTAACTTTTG
AGCAGCTCTTGTCCAGACATGTTATGATATATATATATCTCAGAGCGTTC
ACATTTGACATGTTACTAACAATGCATTTCACTGCGCACGAGCAGTTCAA
CCCGTGAAGCGGCTTATTGTATTGGACACAATGTTGCTGTTCCATGGAGG
TCTCTTAAACATGGTGCAAATATGTCTTTAATTGTCCTTCAGTTCCAGCC
AAGGTCATGAAGCCCCCAGAGAACGTCACGGCCAAGAAGGGAGAAACCAT
CACCATGCGGGTAGGTACAGGTTCACTAAGGAGGGACTGTGAATGAATAT
ATTTTGTCATAGGCAAGTCATCGAAATTTCGAAATTCATTACGCATCCTG
AAACTCGATCTCTGATTGGCTGACCCTTGGCCTTGATTTGACCCCAGGTG
GAGATCGAGGGTGACCCGGAAGCTGACGTCATCTGGAAGCACAAGAAGAA
GGAGATCAACGAGGGCGGACGCTACAGCTACGAGGACACGGACACGTACT
CCATCCTAAGGTACGTCACGTTACTGCACTGGCTTTGGTTTCCGTTAGGG
GGCGCTACAGATACGAGGGCACGGACACGTACTCCATCCTAAGGTACGTC
ACATCACTGCACTGGCTTTCGTTTCCGTTAGGGGGCGTTATAGCACCGAG
GACACGCAAAGTTTAAAAGGCCTTAAATGCTTGTATTCAATTTAACACCG
GAATGTCTGTTTCTTGCCTCTACATATTTTAAGAGTACCTGGTTATGAAT
AATTTCTTTCTTTCAATAAAATCATTTTCTGTGTTCCGACATGACCTAGC
TGTCGCCATGTTGGATCCATCCTCGAACTATCGGATACCAACATGGCGGT
GGCGATTTGAAAACGACGAGTTTTGGCGTTACATGAAGTCCACTTAATAA
CAATCTTANGAGTTTTGGCGTTACATGAAGTCCACTTGATAACAATCTTA
TTTATTTATCATGTCTTTTTGTTTAGGATCCAGGGCGCGACGGAAGAAGA
CGCGGGAAAATACGAGATCGAAGTCGAGAACGACATGGGCAAGGATAGGA
CCTTCTGCGCAGTCTCTGTCAAGTAA Coding sequence (CDS) from alignment at Sc0000008:6050144..6053269+ >transcript:BL95167_evm1 ID=transcript:BL95167_evm1|Name=transcript:BL95167_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4998bp|location=Sequence derived from alignment at Sc0000008:6050144..6053269+ (Branchiostoma lanceolatum)
ATGCCGAAACAGCCCGCGGCGAAGAAGGAGGAAGAGGCCAAGAACCCGTT
TGAGGGGGTTGACGTGAAGGACCCGATCGTGGTCCGGGCCGCCACGCGCA
TCCAGGCGGCCTTCCGCTCGCACAAGTCCCGCAAGGAGCTCATGGAGAAA
TCCCTGCCCAGCTTCACACAGGAGCTGAAGGACATGTTCGGGTACGAGGG
CAGCGCCACCAGCTTCTTCTGCCGCGTGTGGGGCATCCCCGACCCCGTCA
TCACGTGGTACAAGGACGGCGAGCTCATCAAGGAGGGACCCAAGTTTCAG
ATCGGATTCGATAGCAAGGACGGCACGACGCTGACGATCCAGAACGTGAG
CCGGGAGGACGTGGGGCAGTACACCTGCAAAGCCAACAACAGCCACGGGG
AGGCGTTCGACTCCGCACGGCTCATCGTCGATATTCCAGCCAAGGTCATG
AAGCCCCCAGAGAACGTCACGGCCAAGAAGGGAGAAACCATCACCATGCG
GGTGGAGATCGAGGGTGACCCGGAAGCTGACGTCATCTGGAAGCACAAGA
AGAAGGAGATCAACGAGGGCGGACGCTACAGCTACGAGGACACGGACACG
TACTCCATCCTAAGGATCCAGGGCGCGACGGAAGAAGACGCGGGAAAATA
CGAGATCGAAGTCGAGAACGACATGGGCAAGGATAGGACCTTCTGCGCAG
TCTCTGTCAAGTAAATGCCGAAACAGCCCGCGGCGAAGAAGGAGGAAGAG
GCCAAGAACCCGTTTGAGGGGGTTGACGTGAAGGACCCGATCGTGGTCCG
GGCCGCCACGCGCATCCAGGCGGCCTTCCGCTCGCACAAGTCCCGCAAGG
AGCTCATGGAGAAATCCCTGCCCAGCTTCACACAGGAGCTGAAGGACATG
TTCGGGTACGAGGGCAGCGCCACCAGCTTCTTCTGCCGCGTGTGGGGCAT
CCCCGACCCCGTCATCACGTGGTACAAGGACGGCGAGCTCATCAAGGAGG
GACCCAAGTTTCAGATCGGATTCGATAGCAAGGACGGCACGACGCTGACG
ATCCAGAACGTGAGCCGGGAGGACGTGGGGCAGTACACCTGCAAAGCCAA
CAACAGCCACGGGGAGGCGTTCGACTCCGCACGGCTCATCGTCGATATTC
CAGCCAAGGTCATGAAGCCCCCAGAGAACGTCACGGCCAAGAAGGGAGAA
ACCATCACCATGCGGGTGGAGATCGAGGGTGACCCGGAAGCTGACGTCAT
CTGGAAGCACAAGAAGAAGGAGATCAACGAGGGCGGACGCTACAGCTACG
AGGACACGGACACGTACTCCATCCTAAGGATCCAGGGCGCGACGGAAGAA
GACGCGGGAAAATACGAGATCGAAGTCGAGAACGACATGGGCAAGGATAG
GACCTTCTGCGCAGTCTCTGTCAAGTAAATGCCGAAACAGCCCGCGGCGA
AGAAGGAGGAAGAGGCCAAGAACCCGTTTGAGGGGGTTGACGTGAAGGAC
CCGATCGTGGTCCGGGCCGCCACGCGCATCCAGGCGGCCTTCCGCTCGCA
CAAGTCCCGCAAGGAGCTCATGGAGAAATCCCTGCCCAGCTTCACACAGG
AGCTGAAGGACATGTTCGGGTACGAGGGCAGCGCCACCAGCTTCTTCTGC
CGCGTGTGGGGCATCCCCGACCCCGTCATCACGTGGTACAAGGACGGCGA
GCTCATCAAGGAGGGACCCAAGTTTCAGATCGGATTCGATAGCAAGGACG
GCACGACGCTGACGATCCAGAACGTGAGCCGGGAGGACGTGGGGCAGTAC
ACCTGCAAAGCCAACAACAGCCACGGGGAGGCGTTCGACTCCGCACGGCT
CATCGTCGATATTCCAGCCAAGGTCATGAAGCCCCCAGAGAACGTCACGG
CCAAGAAGGGAGAAACCATCACCATGCGGGTGGAGATCGAGGGTGACCCG
GAAGCTGACGTCATCTGGAAGCACAAGAAGAAGGAGATCAACGAGGGCGG
ACGCTACAGCTACGAGGACACGGACACGTACTCCATCCTAAGGATCCAGG
GCGCGACGGAAGAAGACGCGGGAAAATACGAGATCGAAGTCGAGAACGAC
ATGGGCAAGGATAGGACCTTCTGCGCAGTCTCTGTCAAGTAAATGCCGAA
ACAGCCCGCGGCGAAGAAGGAGGAAGAGGCCAAGAACCCGTTTGAGGGGG
TTGACGTGAAGGACCCGATCGTGGTCCGGGCCGCCACGCGCATCCAGGCG
GCCTTCCGCTCGCACAAGTCCCGCAAGGAGCTCATGGAGAAATCCCTGCC
CAGCTTCACACAGGAGCTGAAGGACATGTTCGGGTACGAGGGCAGCGCCA
CCAGCTTCTTCTGCCGCGTGTGGGGCATCCCCGACCCCGTCATCACGTGG
TACAAGGACGGCGAGCTCATCAAGGAGGGACCCAAGTTTCAGATCGGATT
CGATAGCAAGGACGGCACGACGCTGACGATCCAGAACGTGAGCCGGGAGG
ACGTGGGGCAGTACACCTGCAAAGCCAACAACAGCCACGGGGAGGCGTTC
GACTCCGCACGGCTCATCGTCGATATTCCAGCCAAGGTCATGAAGCCCCC
AGAGAACGTCACGGCCAAGAAGGGAGAAACCATCACCATGCGGGTGGAGA
TCGAGGGTGACCCGGAAGCTGACGTCATCTGGAAGCACAAGAAGAAGGAG
ATCAACGAGGGCGGACGCTACAGCTACGAGGACACGGACACGTACTCCAT
CCTAAGGATCCAGGGCGCGACGGAAGAAGACGCGGGAAAATACGAGATCG
AAGTCGAGAACGACATGGGCAAGGATAGGACCTTCTGCGCAGTCTCTGTC
AAGTAAATGCCGAAACAGCCCGCGGCGAAGAAGGAGGAAGAGGCCAAGAA
CCCGTTTGAGGGGGTTGACGTGAAGGACCCGATCGTGGTCCGGGCCGCCA
CGCGCATCCAGGCGGCCTTCCGCTCGCACAAGTCCCGCAAGGAGCTCATG
GAGAAATCCCTGCCCAGCTTCACACAGGAGCTGAAGGACATGTTCGGGTA
CGAGGGCAGCGCCACCAGCTTCTTCTGCCGCGTGTGGGGCATCCCCGACC
CCGTCATCACGTGGTACAAGGACGGCGAGCTCATCAAGGAGGGACCCAAG
TTTCAGATCGGATTCGATAGCAAGGACGGCACGACGCTGACGATCCAGAA
CGTGAGCCGGGAGGACGTGGGGCAGTACACCTGCAAAGCCAACAACAGCC
ACGGGGAGGCGTTCGACTCCGCACGGCTCATCGTCGATATTCCAGCCAAG
GTCATGAAGCCCCCAGAGAACGTCACGGCCAAGAAGGGAGAAACCATCAC
CATGCGGGTGGAGATCGAGGGTGACCCGGAAGCTGACGTCATCTGGAAGC
ACAAGAAGAAGGAGATCAACGAGGGCGGACGCTACAGCTACGAGGACACG
GACACGTACTCCATCCTAAGGATCCAGGGCGCGACGGAAGAAGACGCGGG
AAAATACGAGATCGAAGTCGAGAACGACATGGGCAAGGATAGGACCTTCT
GCGCAGTCTCTGTCAAGTAAATGCCGAAACAGCCCGCGGCGAAGAAGGAG
GAAGAGGCCAAGAACCCGTTTGAGGGGGTTGACGTGAAGGACCCGATCGT
GGTCCGGGCCGCCACGCGCATCCAGGCGGCCTTCCGCTCGCACAAGTCCC
GCAAGGAGCTCATGGAGAAATCCCTGCCCAGCTTCACACAGGAGCTGAAG
GACATGTTCGGGTACGAGGGCAGCGCCACCAGCTTCTTCTGCCGCGTGTG
GGGCATCCCCGACCCCGTCATCACGTGGTACAAGGACGGCGAGCTCATCA
AGGAGGGACCCAAGTTTCAGATCGGATTCGATAGCAAGGACGGCACGACG
CTGACGATCCAGAACGTGAGCCGGGAGGACGTGGGGCAGTACACCTGCAA
AGCCAACAACAGCCACGGGGAGGCGTTCGACTCCGCACGGCTCATCGTCG
ATATTCCAGCCAAGGTCATGAAGCCCCCAGAGAACGTCACGGCCAAGAAG
GGAGAAACCATCACCATGCGGGTGGAGATCGAGGGTGACCCGGAAGCTGA
CGTCATCTGGAAGCACAAGAAGAAGGAGATCAACGAGGGCGGACGCTACA
GCTACGAGGACACGGACACGTACTCCATCCTAAGGATCCAGGGCGCGACG
GAAGAAGACGCGGGAAAATACGAGATCGAAGTCGAGAACGACATGGGCAA
GGATAGGACCTTCTGCGCAGTCTCTGTCAAGTAAATGCCGAAACAGCCCG
CGGCGAAGAAGGAGGAAGAGGCCAAGAACCCGTTTGAGGGGGTTGACGTG
AAGGACCCGATCGTGGTCCGGGCCGCCACGCGCATCCAGGCGGCCTTCCG
CTCGCACAAGTCCCGCAAGGAGCTCATGGAGAAATCCCTGCCCAGCTTCA
CACAGGAGCTGAAGGACATGTTCGGGTACGAGGGCAGCGCCACCAGCTTC
TTCTGCCGCGTGTGGGGCATCCCCGACCCCGTCATCACGTGGTACAAGGA
CGGCGAGCTCATCAAGGAGGGACCCAAGTTTCAGATCGGATTCGATAGCA
AGGACGGCACGACGCTGACGATCCAGAACGTGAGCCGGGAGGACGTGGGG
CAGTACACCTGCAAAGCCAACAACAGCCACGGGGAGGCGTTCGACTCCGC
ACGGCTCATCGTCGATATTCCAGCCAAGGTCATGAAGCCCCCAGAGAACG
TCACGGCCAAGAAGGGAGAAACCATCACCATGCGGGTGGAGATCGAGGGT
GACCCGGAAGCTGACGTCATCTGGAAGCACAAGAAGAAGGAGATCAACGA
GGGCGGACGCTACAGCTACGAGGACACGGACACGTACTCCATCCTAAGGA
TCCAGGGCGCGACGGAAGAAGACGCGGGAAAATACGAGATCGAAGTCGAG
AACGACATGGGCAAGGATAGGACCTTCTGCGCAGTCTCTGTCAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:6050144..6053269 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95167_evm1 |
| Biotype | protein_coding |
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