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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95139_evm1 >transcript:BL95139_evm1-protein ID=transcript:BL95139_evm1-protein|Name=transcript:BL95139_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=121bp
MCVFSGGYDQDTTMSTMSGALHATRAFAIIGSLLLIPGIALACFAAKKNI
NKGKLIGGALTIAGGVCGVIAAAIFAGRVNADLQPGVSVPYGYSFYLTWA
QAVFTIGGGVAMIVAGRKDQE Run BLAST on NCBI mRNA from alignment at Sc0000007:2006858..2013620+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95139_evm1 ID=transcript:BL95139_evm1|Name=transcript:BL95139_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=6763bp|location=Sequence derived from alignment at Sc0000007:2006858..2013620+ (Branchiostoma lanceolatum)
ATGTGTGTTTTCTCGGGTGGGTATGACCAAGGTATGACATAAATGAAATA
CAACACGGTGTATTCCGCATCACCCTCGGTCCCAGCCCTCCTTCGGGCCA
GTACCTCGGGTTATACGGAATACCCCGTGTTGTATTCTATATAAACGCAA
ATGATACCCTGTTCTTTTCCATAGATACGACGATGTCGACTATGTCCGGT
GCCCTCCATGCCACCCGCGCCTTCGCCATCATCGGGTCGCTGCTGCTCAT
CCCTGGGATAGCTCTGGCCTGCTTCGCCGCGAAGAAGAACATCAACAAAG
GCAAGCTGATTGGAGGTGCCCTGACTATTGCTGGAGGTAAATTTAACATC
CTTTTTGTTATTTTTAGCAGAGTAGGGTCAAAAATTCCGAATTCCTTGTG
GGTATACGTGTACAATGTATGTCTTCATTCATTCACATTCGCCCAAATTA
GTTAGTCAAACAACTGGGTAAGCTTTTGAAACAGTCAGGCGTTTCAGATA
GCATCTGCTATCTTTCGTCAGTGGGGGACGAAAGATAGCTGATGCTGCTT
TAAACTTTTGAATGTTTGAAAGCTTTAATAGCCAGTCGCTTGAGTAACTG
ATTTTGGCGTATCTTATTACCTGGATGTCTAACCTTCATCAATATTCATT
CAATCATTAATTCATTTTCCAACAGGGGTCTGTGGTGTGATCGCTGCCGC
CATCTTTGCCGGCAGAATCAATGCTGACCTCCAGCCGGGCGTTTCGGTGC
CGTATGGCTACTCCTTCCACCTGACCTGGGCTCAGGCGGTCTTCACCATC
GGGGGAGGCGTCGCCATGATTGTCGCCGGGCGCAAGGACCAGGAGGACGA
GCTGCCTGTGCTCCGTGACTAAAAAATGCCACAATAAGCCGTTTCGTGGT
TCCAAGTGCTCATGCGCGACGAGGTGCATTGTGGGTGATATGTCAAATTT
GAAGTCCACGGAGACATGAACAAATCATGTCATGACGTAATGACATGTAT
CAGGTTTATCCGATAAGAACTGGTTACAAGTAAGGGGCCTTCACCTTTGA
CATATTACCCACAATACATTTCGCTGCGCCCGCGAACTAACGTATTAGAT
CGTTTCAAAATTTTATCCAGTTGCTTGAGTAGCTATTTTTGGCGTAACAT
ATTAGAAGGCTTTTTTAAAGCGCAGTCCTGAAAGTTCGCTTGCTTTGCAA
ACATATAGCTTCTTTTAACATCTCTGCTTGTCAACAACTTGCCTATTATG
AAAATAGGAAATGTTAACTACATGTAGTACTTTATAGAAACACAGCATGG
CACATACTTGTAGTGGTTACGTACAAAACAAATATCAATAAATTCACTTC
TTTTAAGTCGATTTCTATTGGAAATTTGTTGTATTTTCTTTCAGAAAGTA
ATAGTCAATACGTTGTGTCGATTAAGGTGTGTCGAAAGAGTTTCTTGTGT
CCAGGTAATCGACAGGATCTGAGGATGTAGTTGCATGTTAAGGCAATCAT
GGTTATTTCTGTTTTGAACGATGGTGAATAAAAACGTGCACTTGAAACCT
TCCGTCTGATATACATTTTTTTGCCCTTAACACTCCCATTCCACTTGGAC
GGCGCTCTCACCGCGCGCTCAGCGAATTTCATTGATTAAAAAAAAAACAT
CCTTCTACGTTTTGTGTGTTTTGTTGCCCTTTCAGCCGTACTTTTACGTT
TGGCCTGACACTCGGAATCAAGTTTTACGATTTAGGTCGCAGCGAGAGCG
TAGTGCTATCGCCAACTATTAAAGGGAGTATAACCAACAAAATGATCTTA
TTACAGCAACGACCTTACTGTACGTGGTGGGGTTCGCGACCACCGCCTGG
CAGCACACTACTATTACCGTACAACATAGGTTGGTAAAGGCAAGCGTCGG
GCTGTGGCAGATCTGCGGTAAATATTTGGGTGCAACAGCTTGCATAGTTT
ACCCAGGTAAGTCAGAGGATGTATCTATTCAATCATAGGTTCCTTTTTCA
CCTGTTTTACTCAGCTTGGTCCCCAAATAACAAGTGCTTACGCCAAAAAA
GCAATTACTCAAACAACTGGATATGATTTTTGGAAACGGTCAGACGTTTC
AAGTAGCATCCACTACTTTTCGTCAGTGACTGTGAACGAGATCAGTTGAA
CGGCAGGGTTATAACCACGAACTATGAATTGATATGCAAATAAGGAGAAG
ACGTCTGACCGTTTCCAAAAATCATATCCAGTTGTTTGAGTAATTGCTTT
TTTGGCGTATCTTATTACCTGGATGTCTAATCTTCATCGACGTAACAAGT
GCTTACTTCATTGCATAATATCTGGATTAGATAGGCTTTGTAGATTTGTA
CATCAAGTTGAGATTCTGAAGCGTCACTGATTTTATTGTGACGTAAAAGC
TGACAAAAACAGTCACGTGCGTTTTGGCAATCACTACCTACGTACCAGCT
GAATTTGACCAATCACGCCCCTAGTTTCGATCACGTGAGATAGACGATCC
CTAGTCAGTCTCATTTTCGAGTGGCTTGCGTTCCTTGCCGGTCACTGATT
TTTCGCAGCGTTACTGATTTGATCGGGGCATAAAATCTGGCCAACAAACC
CTGTCACAACATGAACCGACTTCTTGTGGGTGGTATCGGCATCTCTCTTC
TCGGGGCCTTGTTGTACGTGGTGGGGATAGCGACTCCCGCATGGATGGAG
GCCGAACAACAAGGGTTGGCAAAAGAAGATGTCGGACTGTGGCAGGTCTG
CGGTACATATTTGGGTGTAACAGCCTGCAAAGCGTACCCGGGTAAGCCAT
AGGATGCATCTTTTTATCAATAGATTTCTTTGATATGTTTACTTGCTTTA
AAAACAAACAAGTCACAAGTAAAACACGACCTCAGTCTTGTTCCTCTGAA
CAAGGAGGTTTAAATAGAGAAACCTCAAACCTCCTTGCTCTGAAATAAGC
AGTCAACCCGCCATTGCTAGAGGTGAAATACTTAATGTGTGAACACTGAA
CAAAAGAGGTAGATAGAGGTTGGCTAGACCAATCAGCAGTATTTCAGTTA
TAACGCCCGCAGTTACAGCGCCCTCCGTTAGTACACTAAAAGACGAAAAA
ACGAGTGAAAATCTGCACAGCCACTGTCTTCTTGCCGAATGTTTCATGTC
GTGTCGCATGGCTGGCTTTGTAGAATATGTCTAGCTTGTTTACTAGTATA
GCTGTCTGCTGTTCGCGCTAGATCAAGTTACGTTCAGCCTACGGGTCAAG
GTGATCACAATACCCTCACAGGTAGCAACGGCAACATAAACAAAGCACAA
AGTCTTTAGTAGCGCCTGGCAGTTAACAGGTACTGGAAATGGTATTTTAA
CCCGATTAGGTTCCGATTACCCTAAAAGGGTCCCCCGAAAGTGCGAAATG
GAACGAAATGGAACGAAATGGAACGAAATGGAACGAAACGGTATTTCATT
TCATAATGTTACATNTTTTAATCTAATCACCCGATTCCGATTAGACCCTA
ATCCGGTCCCCCGAGAGTGCGAAATGGAACGAAATGGAACGAAATGGAAC
GAAATGGAACGAAATGGAACGAAAAAGAACTAAAACAACATATGTAACAT
TATGAAATGAAATACCAGTAGATAGCGAATTATAAGGAGTAGACCGGAAC
AGGAAGCATTTTAAATACAGAAGTGAGTGGTAAATACATAATATAACGTG
TTTTATTTCTTGAATCTATGTGATGATATGAAATACAACGTTTTTGTCGC
GTTTGTGTGGCTAGATTCTTTCCTGAAAATGGAGGCGCCGCGTGCAAAGA
GATCCGCCGCTCTTCCTTGTGTACCAACGATCTGCAAATGAACTGCTGCA
AATAGCAGGGAAAACAAGCAAACNAAAGAGAGCCGCCGCTCTTCCTTGTG
TACCAACGATCTGCAAATAAACTGCTGCAAATAGCAAGGAAAACAAGCAA
ACGGAAATGAGTATCGAAGTTAGGACCAGATTATACAGAAGTTGGTGGGT
AACATTGCATCTCCAAGAGGGCATGAGGCAAGCGTAATCTTATCATTTAT
ACAGCTAGCGTGTTGTCGTGTTGTGCGAACCGTGAAATACATGTCCTGCT
CGTTCACACCCTGCCTTTGTTTTTTGTCGTGAACAATGAAGCAGAAATGT
CTCCAGAGGGCTCCACGTCCGTGTTTGAAAAGGAGTGTGAAATGTGGGAA
ATTGGTGACGCAGCAGCTCAGAGCTTCATTTGCATGTCATTAACTGAACG
GAGGGGTCCATTCTCCGACAGGGGTCTGACTTTGAGCCGAACAATTGGTT
GTATACAAATCGTTGTTGCGGAGATAGGCATATGTTACGTACTAGTTATG
GACTAAAACCGTATGTGAATAACTGGAAAGTCGGAGTTTGATTCAACCTG
TCGGTAGCGCACGCCCACAGTTCCGTCGCGCTGGCAACAATGGCGGTTTA
TTTGTATGCGGGGCCCCATTTGGGGGAGAACAGCTCCAAACACGCTGTAT
GAATAATGAAATAACGCTTGCCTCATGCACTCTTGGTGAATTATGAGATG
CAATTTTACCACCAATTGTAATCTAGTCCTAACTTCGATACTTCCGTGTG
CTTGTTTTCCCTGCTATTTGAAGCAGTTCAATTGCAGATCGTTGGTACAC
AAGGGAGAGCGGCGCCTCCATTTTCAGGAAAGAATGTAGCCACACAAACG
CGACAAAAACGTTGTATTTAATATTATCACATAGATTCAAGAAATAAAAC
ACGTTATATTATGTATTTACCATTTATGTATTTCTGTATTTAAAATGCTT
ACTGTTCCGGTCTACTCCTTATAATTCGCTATCTACTGGTATTTCATTTC
ATGATGTTACATATGTTGTTTTCGTTCTTCCATTTCGTTCCATTTCGTTC
CATTTCGTTCCATTTCGTTCCATTTCGTTCCATTTCGTTCCGTTTCGTTC
AATTTCGTTCCATTTTGTTCCATTTCGTTCCATTTCGTTCCATTTCGTTC
CATTTCGCACTTTCGGGGGACCCTTTTTAATCTGCATGTACATGGCGTAC
ATATGTCTCATATGTCATGTGCCCTTTTCATTGTTGAATCCCCCGTCTTG
AATTTGCCTCACCGTAAGCTACACTGTACTACTACTAGGCCTGCCCTCTA
TAGCAGGCTCCCTCGGCTTTTTTTTGCTTATGATACACCTTTTGCTAATG
ACTTCTTTTTGTACTGGGTCGTTTGTGCAGCCAGCCCGTAACTATTGGTC
CTGCTACCCGGGCACAGACGACCCAGTAGTACAAAAAGAAGTCATCATCA
AAAAGTGTAATATAAGCTCAAAGTGCGCAGTTGTTTGTTTTTGAAAGCGA
GACCGTAGGTCTTAGTCGCGATTGTTTTCATCTTTCCGCCGTGTTTCTTT
TACCTCCGCCAAGAAGGTTATGATTTTAGTAGCGTTTGTTTGTAGATTTT
TATGTATGTATTTATGTATGTGGATGAACAGTATAATTCGAGAATATTAA
TGCCTGGGTGGATTGCCTTGCTATTTGGTATTTGGGTAGGGCTTGAAGAG
ACCTTACCCCCTAAAGGCTTGTTACGGTACTACAGCGGAATCTTCGGCTT
TCATATTCCATGCTACATGCTATGGTCGTTATTTTTTAGTAGTAGATAGC
CCTTCGGGCAGAAGGTTCAAGGTAGATGGTGTAGAGTTGGTCCTCCAAGC
TGGAATCGAAGCTTAAGGAGACGATTTTCTTTGAGACTTTGAAAGAGAAG
AACTAAAGAAGGGGTTGACGAATCGTCATGATTTCTGGTACGTAGATAGC
TTTTGTGATGCACCATATAATTGTAACAATACTTCAACATAACCGTAGGT
AAACAATTGTTAGGAAGATTGTGATAGCCATTGACTCACTAGTTTTCCTT
GTAGATTATGTACTCTTTTATATCAGAAGTGTGCCAACTTTTGGTCAAAG
TTTTTGGATGTTAAAAGACCTATTTATGATCCACTGATATGCAAATGATA
CCCACTTATTCATCGTAGATATCGGTCAGCTGTCCGGTGCATTACATGCC
ACCCGTGCCTTTGCCATCATCGGATCGCTGCTGCTCATCCCTGGGATAGC
TCTGGCCTGCTTCGCCGCGAAGAAGAACATCAACAAAGGCAAGCTGATTG
GAGGCGCCCTGACTATTGCTGGAGGTAAATTTAACATCCTTTTGGGCGAC
GCCTAATGGTGTATTATTGTAGCCTGAGTGCCAGCCTTTTTTATATAGCT
TCCGTCCGCTACCCTAGCTCCGCTGCGCTACCCAAGCTCCGCTGCCGGCC
AGGAGCGGAGCTTGGGTTGCGTACGGAAGCTAAAAAGGCTGGCACTCAGG
CTAATATTATTGTGTGCAGTCTGCAAGAACTTTAGGAATTGTACAGGGAT
GTGTCCACAGCAATTTAAGTCCACAAGACGATAACTTGAGAATATACCTG
GATAATTTGTCTTCATTTTTGGTAAGAGGTAGGTCTTTCTGAGATATCCA
AATGATTAGATTTTGGCCCCCCTAGCAACTTTCTATNCCCCCCCTAGCAA
CTTTCTATGAAAAGTCATTCATTCATTCATTTTCCAACAGGGGTCTGTGG
TGTGATCGCTGCCGCCATCTTTGCCGGCAGAGTCAATGCTGACCTCCAGC
CGGGCGTTTCGGTGCCGTATGGCTACTCCTTCTACCTGACCTGGGCTCAG
GCGGTCTTCACCATCGGGGGAGGCGTCGCCATGATTGTCGCCGGGCGCAA
GGACCAGGAGTGA Coding sequence (CDS) from alignment at Sc0000007:2006858..2013620+ >transcript:BL95139_evm1 ID=transcript:BL95139_evm1|Name=transcript:BL95139_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at Sc0000007:2006858..2013620+ (Branchiostoma lanceolatum)
ATGTGTGTTTTCTCGGGTGGGTATGACCAAGATACGACGATGTCGACTAT
GTCCGGTGCCCTCCATGCCACCCGCGCCTTCGCCATCATCGGGTCGCTGC
TGCTCATCCCTGGGATAGCTCTGGCCTGCTTCGCCGCGAAGAAGAACATC
AACAAAGGCAAGCTGATTGGAGGTGCCCTGACTATTGCTGGAGGGGTCTG
TGGTGTGATCGCTGCCGCCATCTTTGCCGGCAGAGTCAATGCTGACCTCC
AGCCGGGCGTTTCGGTGCCGTATGGCTACTCCTTCTACCTGACCTGGGCT
CAGGCGGTCTTCACCATCGGGGGAGGCGTCGCCATGATTGTCGCCGGGCG
CAAGGACCAGGAGTGAATGTGTGTTTTCTCGGGTGGGTATGACCAAGATA
CGACGATGTCGACTATGTCCGGTGCCCTCCATGCCACCCGCGCCTTCGCC
ATCATCGGGTCGCTGCTGCTCATCCCTGGGATAGCTCTGGCCTGCTTCGC
CGCGAAGAAGAACATCAACAAAGGCAAGCTGATTGGAGGTGCCCTGACTA
TTGCTGGAGGGGTCTGTGGTGTGATCGCTGCCGCCATCTTTGCCGGCAGA
GTCAATGCTGACCTCCAGCCGGGCGTTTCGGTGCCGTATGGCTACTCCTT
CTACCTGACCTGGGCTCAGGCGGTCTTCACCATCGGGGGAGGCGTCGCCA
TGATTGTCGCCGGGCGCAAGGACCAGGAGTGAATGTGTGTTTTCTCGGGT
GGGTATGACCAAGATACGACGATGTCGACTATGTCCGGTGCCCTCCATGC
CACCCGCGCCTTCGCCATCATCGGGTCGCTGCTGCTCATCCCTGGGATAG
CTCTGGCCTGCTTCGCCGCGAAGAAGAACATCAACAAAGGCAAGCTGATT
GGAGGTGCCCTGACTATTGCTGGAGGGGTCTGTGGTGTGATCGCTGCCGC
CATCTTTGCCGGCAGAGTCAATGCTGACCTCCAGCCGGGCGTTTCGGTGC
CGTATGGCTACTCCTTCTACCTGACCTGGGCTCAGGCGGTCTTCACCATC
GGGGGAGGCGTCGCCATGATTGTCGCCGGGCGCAAGGACCAGGAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:2006858..2013620 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95139_evm1 |
| Biotype | protein_coding |
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