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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95133_evm1 >transcript:BL95133_evm1-protein ID=transcript:BL95133_evm1-protein|Name=transcript:BL95133_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=199bp
MTTYVLKRSHPLRLLKEGHEQRLKKMNKVYELVEETAPRDAKPKLQLILT
EDVPKLGKKGDVVQVRKQFGRNKLLATGLAVYASPENRQMFEDRKVEDPS
QRKLSLTAEKTLEYLSQQTLTISVRDDWPDDWVMTKEHLSHWMFRHLLIV
APPHTIMLPEEPVDRLGSYTFTVTINQLESVEVKLEMVPHIPAGEVSQI Run BLAST on NCBI mRNA from alignment at Sc0000006:172626..177658- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95133_evm1 ID=transcript:BL95133_evm1|Name=transcript:BL95133_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5033bp|location=Sequence derived from alignment at Sc0000006:172626..177658- (Branchiostoma lanceolatum)
ATGGTCAATTCCACAGTCGTGGAAGTTAAAAAAAAGGAATACAGGGTCTT
TGGAAGTACTGTAGCTCCTCCTTTGTGTACAGACTACACAATGTATTGAA
TGAAGCTAGTGACACACAACTCTAGTGGAAAATCCCTTTTTGATAGGTAC
TGCCAATAGCCTTCGCCATAAGAATGATATCCTGTATATACACTTGCAAA
AAATTTTGATCAATCATATCGCCGTTATCACTTTATCAATTGTATTGCAT
TGTGCATGATTGCAAAGCTTATTTCGGCTTACCTTTACAATTATACTACA
TTTGTCATGATTGTATATTGACGTCGAACACCAGAGCTGGCTATGCGAGT
GTGTCACAAAGCAAAACTGTCAAATTTCGGTCATTTTGGGGGTAACCCGA
AATCAGTCATGGTGCTCATTGCACAAAAATGTAGCCAAGGATGCATCATT
TTAAAGCAAATATTCACACGCTTTTCAACGATATGAAACATAATGCTAAT
CTTCAAAAACAACGGACAGATAACCATTGAAATTTCGGCACTTTTTTCGC
GACCTACTCACATCAACTTATAGCCCTAGCCTGCAACCCATGAATGTACG
ATCATTACGTACGGAATGATATTCCAAAGGGCAATGAATAAGTTTTCCAA
TTATGAACATCACGATACACTTCATAAAGCATTTACGGAGATATGATCAA
CTTTTTGTACTCAGTTACCACTTAATTACACGTCAATTGGACTGAAATAG
CGTGGCCTCAACAGTGGATCAAAAGCGTCTTCTAGCAGCTGCAAAAATTA
TTGCAGTATCAGTCGTATCATGCAGCTGCAAAAATAATATTGATCGCTAG
ATGTCCTCAGTGATACATAACCTATGACCGCCAAAGGTTGTGAAAACGTG
TGTCCACCATCGTGTCCAGGACAAACGGCCCACAAAAATGTCTGTGAACT
TGAGCCTGGTAGCTGTAGCTAGCCGACAACTACTTCAAGCCGCCAGAATA
TCAGCTGAGAGTTTGAGCCTCCAACAAAGACGGGTGAGAAAGTGTTCGCA
TCGTTTCGAAAGAATTTTGACTTTATGTCTGTGGGAGGGGGGTGCCAGTT
CACTTTGGTTGGAGGTCATTTTTAACCCCTTTAAAGTTAGATAAAGAGAC
AACTGAATCAGGGCTTCTGAAACATTCGGTTTTTGAAATTGAAGGGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTTTATCTACTTGACTGAAGACGTTACAAAGCAGTATGGGTAAGGGG
GTGAAGTTTGCCTTTTATGCTTAACGTTATACCTTAATAGAGTTTCAGAC
CATGTGTATTTTCCAATGCATGTAATAAGTTCAACTGAGTTGTAGATGTA
GTAACATGTTAGACATTGTTTGTACCATACCAACATCACTCAATTCACTG
CCCTGCGTGTTTCTCCAGACTACCTACGTCTTGAAGAGGTCACACCCCCT
CCGACTCTTGAAGGAGGGACATGAACAGCGTCTGAAGAAGATGAACAAAG
TCTATGAGCTGGTAGAAGAGACAGCTCCCCGGGATGCTAAACCCAAACTC
CAGCTCATACTCACAGAGGATGTGCCAAGTATGCTTTTCCCTTGAAGAAT
CGTAGAATGGAACTTGTTGCCACCAAATACACTAGATGGCTTTAAACAGC
GCTTAATGTTATAGCTAGATGTGCATTAGGTTAGGTATGACAGGTCGTTC
AGTGTAATATAACCAGCTACTGCCACACCGCGTGCCTGCGAAGCTGGTAC
TAGTATATTACACCAAAGGGCTGGAAGCCTGGTTGCCAGACCACCGCGCT
CCTGGCGCTAATCCTTCGGCCGGGGAAGCAACTCGCGTTGCCGCCACAGA
CAGCACACGGCCCACTAATTATCTCTCGCGCGGTCTGGCATGCCGAGCTA
GCGCGATAGATATCAGGGTTCGGCTGCAAAGCGCCCGGGTGCCAACTCTA
TCCCTACTGCCAGGTCTTCCAAAAAGGCTTATCATCGCATCGCGCAAAAG
GTCTGGTATCCAGGCTATTATACTGGCTGTACAGATACAAGTGTAAAATC
ATCTTCCCGACAATCCTGATCCCATAGGCCTGTAGAAATGTGAAATAAGA
ACATTATTGATTACTAGTAAGAATGCAACTAATTGACAAACATGCAGTGA
CTCTCTCATTGGTCGAATCGCTAATTGCCAGGCTATCATTGGTTAAACCT
CTATTTGCAATGGACAGTCAGGATCAGTCTGGTATGTATACATGTATATA
ATGCTTTATTCCACACACAGGTATTTAGTAGTTCAAAGGTCAAACTTATT
CACTGGTCGTTGATATACAGTCATTTCTCTCATCTATTCAAATCTTGCAA
ATTACTTGTTTGGACAGGATGAGTACCATCAGACCCATAACATGTGTGTT
TTCATATTCTGTTTATTTTTAGAACTAGGGAAAAAAGGAGATGTTGTGCA
AGTCAGGAAACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTG
TGTATGCTTCACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTGAGT
TATATTTAGCTAAGATAGATGTAAACATGTCGGTGCCTGTGTCAGCAGTA
GTGCCACATACCTAACAGGTACAGGTACAGAGCTTTAGGTTTAGCTGTAG
GTACCTGTACCTGCACCTACACCTAGGCAGTTTGACAAAGTAACCTGCGG
TCTTCAGTGATGTCAGAAATGTGAATAAACAGTTAATGGAATGTTTATTT
AGACTTAAGGTATCTAATGCAGAGAACCCAAGCATTCAAAAGAATCTCAA
ATCAGCAAAGGTCTTGATTTGAGTGCCCAATATTATGATCAATGTATTCA
TCTTTTTCCAGTGCTAAATTTTGATCTTTGTGGTAGGAATTTGTGGCAGG
TACATTCCCTTTACATTGATGTTGTAGTAATTTAGACCTGTAACACTAAC
AGTACCTACATTTGTCCAATATAAAAATGTTTCTCAAAGTGTCCATAAAG
TGTGATTGATATGTTTGTCTCATACAGGTTGAAGATCCTTCACAGCGTAA
ACTCTCTCTCACAGCAGAAAAGGTACGAAACAAAAACTATCTGTGCTTAT
TTAAGTAAAAAACAACATCCATTTTGATTGTTATATACATGTATGTAAAA
AACTGATATAATTTCTATGAGAACGTGCTTGAGGTGTGGCTTGTCCCTTG
TTCCCATTGTTATCTTGTATATAGTATAGTTACATGTTTGGTACAATTAA
TTAAAGGCAAAAACAAACTCACTCCTTACGTATTATTCCAGACTCTGGAG
TACCTGTCCCAGCAGACACTGACCATATCTGTACGGGACGACTGGCCAGA
TGACTGGGTCATGACCAAGGAACATCTCTCACACTGGATGTTTAGACATG
TAAGAGCCTACGTATCTTATGAATTTGATTTCTGTGACCCTAAGGCCACA
CCGATTTGATTTCTTGATTCTCGCATTTTTGCTGGAAATGGATCCAGAGT
GAGTGAACAAAACTTTTAAAAGTTAAATGTAGTCCCATAGACTTTTTGAG
ACCGTAGGGGCAGTGGGTTGCTATCCACTGTGTCTAGGTAACGGTATTAG
AAAGTGGAGCCCATCCCTCTCCTTCCACCGCCGTTTAGTACCTCCCTAAC
CAAAGTCAGGTGGAGTGAAAAACTAGTGCAAAGTTCCTTTCCCAAGGACA
CAGCGTCTAGCCAGGAATGCCAGGAATTGAATTGGTGACCTCTTGATGTC
GTGTCTGCTAGCCAAAGCACACTGTTAGTGCCAAACTATGAGCCTTTGGG
GGTTGATTAATAATGGTACATTTGACCTATAAAAAATCAAATAGGAGAAA
CCAAGAAATATTACTTGTGTTGCCTAATGGCACAGTTTTTGTTACCCTTT
TCATCACTTTTGTAGCCTTGTTGTAGTCCACCTTTGCAGCTCTACCTATT
GAATGGTTTGTTTATTTTTCCCAGCTGTTGATAGTGGCACCTCCACACAC
CATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGGATCTTACACCTTCA
CAGTTACTGTAAGTCTTGTCTTCCCTGTGCTTTCATTTGACATCACACCA
CATTGATTTATATGTACAAGTACTTGAAAATGTTAATGTTACACACACTT
AATACAAAATAATTCATGTTTCTGCTAGTTCATCAGAGAACAAAATTAAT
TTTCTAAAGTTTTCACTCTTTCTTATGAGGCTTTAACACGATTTTTGAAA
AAAAGTCCTTTGTTTCTTGTACAACTGACTTCAAGACACTGAATGCCATA
AGCACATTTGATGCCTGCCTACCCGCCTACGTGCTCAGGCCAGTAACTGG
CACATTTGATTATATCTTTAAATTTGACAACTCTCATAATGCAAAAATAG
GTAGATACATAAAGGATTGCTTTGTTATTAGTAAAGATACGGAAACCCAC
GATTAGCCCTACCTTTCTGTAACATGATGTTATTTAAAAAATTAATATCT
ATTTTGATATCATATGCTGGCTGTATATAATTTGTATGATTCTTATACTT
GTTTTTAGACGTATAAAATAATTATGTGATGACAAAGCTGTACAATTAAG
CTCACTGTTGGGCTACCAACAGCTTTTACCCTTCTTGTGGAGGAATAAAC
CAGTCTTCTACTACTTAGTATTTCTATTTTGTAGTTTGTAGTTGACGGTA
CGAAAGTCACTGTACTTTTTGTTGCGTCAATAAAGCTTCTTCTTCTGTCT
GTACATCCCACCATTGTAAAAGAGATTGATATGAAAAAGAACTGTCCAGA
AAAGTCCTCCATTACTTCACCCAGGAGGTGCAGTGCAGTTTCTGTCAATT
CTGCCAGGGGGCTCTTATACTGTCTGTCATCTCTGATTGCCTGTTCTTGT
TGCAGATTAACCAACTGGAGTCAGTAGAGGTCAAATTGGAGATGGTTCCA
CATATCCCAGCTGGAGAAGTGTCACAGATCTGA Coding sequence (CDS) from alignment at Sc0000006:172626..177658- >transcript:BL95133_evm1 ID=transcript:BL95133_evm1|Name=transcript:BL95133_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4200bp|location=Sequence derived from alignment at Sc0000006:172626..177658- (Branchiostoma lanceolatum)
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
ATGACTACCTACGTCTTGAAGAGGTCACACCCCCTCCGACTCTTGAAGGA
GGGACATGAACAGCGTCTGAAGAAGATGAACAAAGTCTATGAGCTGGTAG
AAGAGACAGCTCCCCGGGATGCTAAACCCAAACTCCAGCTCATACTCACA
GAGGATGTGCCAAAACTAGGGAAAAAAGGAGATGTTGTGCAAGTCAGGAA
ACAGTTCGGGAGAAACAAGCTGCTGGCCACGGGGCTGGCTGTGTATGCTT
CACCGGAGAACAGGCAGATGTTTGAGGACAGAAAGGTTGAAGATCCTTCA
CAGCGTAAACTCTCTCTCACAGCAGAAAAGACTCTGGAGTACCTGTCCCA
GCAGACACTGACCATATCTGTACGGGACGACTGGCCAGATGACTGGGTCA
TGACCAAGGAACATCTCTCACACTGGATGTTTAGACATCTGTTGATAGTG
GCACCTCCACACACCATCATGTTACCTGAGGAGCCTGTGGACAGGCTAGG
ATCTTACACCTTCACAGTTACTATTAACCAACTGGAGTCAGTAGAGGTCA
AATTGGAGATGGTTCCACATATCCCAGCTGGAGAAGTGTCACAGATCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:172626..177658 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95133_evm1 |
| Biotype | protein_coding |
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