|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95131_evm2 >transcript:BL95131_evm2-protein ID=transcript:BL95131_evm2-protein|Name=transcript:BL95131_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=183bp
MLHYLGLRKKSGKLVFLGLDNAGKTTLLHMLKDDRMAQHVPTLHPTSEEL
EMGGMRFTTFDLGGHAQARRVWKDYLPAINGVVFLIDAADRSRYKEGKEE
LDSLLTDEQIANAPVLILGNKIDKPGAASEEELRQWFGLHGQTTGKGNVP
LHELNTRPVELFMCSVLKRQGYGEGFRWLAQYI Run BLAST on NCBI mRNA from alignment at Sc0000006:7039576..7042558+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95131_evm2 ID=transcript:BL95131_evm2|Name=transcript:BL95131_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2983bp|location=Sequence derived from alignment at Sc0000006:7039576..7042558+ (Branchiostoma lanceolatum)
ATGCTGCACTATTTAGGTAAGACAACCATCGTGTGTGTGTGTGTGTCATA
CTATGTGTTTTCGCAGTTTGTATGCTTGATTGTGTATGCCTTTTTGTGTA
TGGTTGGGAGTCCGGCATCTTCCGCTGCAAAATTTTAAAATTCATAACCC
AATGAGACACTATTTCCTTCATTTTGAGGGATAAACTTTAGTTTTTTCTC
TGTCACAGCCTCATCCTAAAGCCAAATATTAAATTTTTGTTAAAGATATG
AAGGGTCACATTCACAAGGTCAGAAAGAAAAACCCCTATGCTGGTTGAAA
ACACAGCATAGGGGTCCAGATCACAGCATAGGTAGAGGGTTCCTAACTTC
CTATGCTGAAAAGGCCTGGTGAGAACGCTGATGTGTGTGTTGGAAACTAC
AGCATGTTTGACTTGTTGACGTTTGTTGGTGAACAATGTGCTTATACATG
TATATACGTTGCTCTGTGATAAAGAAGGTTTTCCCAACCATGCCACTAGT
ACTCCTTTTCAAAATTTGCCCCAGGTCTGTGGGAAAAGTTGGGAAAGCTA
GTCAGTTTTGTGTAATCAATGTCTGATTAAATACTGTGTAATCATGAAGG
TTTTCCTGACAATCGCAGGTCTGCGGAAAAAGTCAGGGAAGCTGGTGTTC
CTGGGCCTGGACAACGCGGGGAAGACGACCTTGCTGCACATGCTGAAGGA
CGACAGAATGGCGCAGCACGTCCCCACGTTACACCCCACCTCCGAGGAGC
TCGAGATGGGCGGCATGCGCTTCACCACCTTCGACCTCGGGGGTCACGCA
CAGGGTAGGGCACCAGGGCAACAGGTTGCTTAGCAACGTTGTAAGATTGT
AGTTATAGATAAGTAGATATCGTGTCCCCACGTTACACCCCACCTCCGAG
GAGCTCGAGATGGGCGGCATGCACTTCACCACCTTCGACCTCAGGGGTCA
CGCACAGGGTAGGTCGCCTTGGCAACAGGTTGCCTTGGCAACGTTTTAAG
GTTGTGGTTGTAGAGATGCAGATAGACCAGTTGAGCCAACTGTAGCCTAT
GGTGTGGACTGCAAATTGTGCACCAGAGCACAGTTCTGTGTGGTTCCAGG
GTGTTCAAGTGCAGCTCTGTTATATCTAAAGTAGTTTTATACTTGGTATA
GCAGTTCTGTAGTATTCTAGTGTGGTTCAGTTTGTTTCTACTGCTGTTCT
GCTGTTGTCTTGTGTAGTAACTTTGTTTGTTTGTAGTTCAGTCGTATTTG
TTCTACCTGTGTGTTGAAAGCATGAACAAAAAGAAAACGTCCAAACTTGT
CCATTTCAAGGTTAATCGTTCTGTCCCGCCCATTTCAAGCGTTTTCCGTG
TTCATTTGTAGTCCAGATATACATTTCTTGTGTTTGTGTTGAAAGCACGG
ACAAATAGAAAACCTCCAAACTCGTCCATTTCAAGATTAATCGTTCTGTC
CCGCCTTTTCTGTGTTCATTTGTAGTTCAGATATACATTTCTTGTGTTTG
CCTTGAAAGCACGAACAAATAGAAAACCTCCAAACTCGTCCATTTCCCGA
CTAACTTCTGTCCCTCCCGTTTGCAGCGCGGCGAGTGTGGAAAGATTACC
TCCCAGCGATAAACGGCGTGGTGTTCCTCATCGACGCGGCCGACAGGTCC
AGGTATAAGGAAGGCAAGGAGGAACTGGACGTGAGTTGAACTGATCACTG
ATTGGTATCTTTCTTTCATCAGCCAGTAATGCTCAGGGTCACATTTCCTA
ACCGGCCCCCGGCCGGGCTGTTTGCGGAAACAAAAATCAAAGTGCATGTC
AATAGATTTGCACAAGCTATGCTCTTAGATGATTTTAGGTACATTTTGTG
TTTTTGTTTTTTATATCATACTTTTCGTTCACAAAGACTGCCCGGCCGGG
CCCCGGATTGGAAATGTGACCCTAGCATTACTAGTAGACCTGTAGGCCGA
TTTGAGCTTCTCATGAATAAAGAAAGGTTCAAGGTTCTGGGGTAACCGGC
CACAGCGCTATAATTTGTGCCACCACGTTAAATAAGTACCATCGCGCTTA
ATTTTCAACTAGTGTAGCGGTACTTTGTAAGAATTCACTTGTCTCATAAT
GTGAAAAATGTTGATATGATCCTCTAAACTGACCCCTTGGCCTAAAAAGA
ATTAAGTCCTCCATGGATACCCCCTGATTTAGTCTTGTAGATGATGACTG
TTGACTTTAATTCTAAACTGTATATGATATACAATGTTTAAGGCGTTAGA
AACATCTATGAACCTGATGTAATGTTGTTGTTACCTCGCTAACTGATCAG
AGAGGCCGAGGACAGAACAGGATGGTCTCGGATCATTGCTGCTGGCTGTC
ATGACGCCCCTACGGCCACTGAGGTCATGGGTCGTGAGTGAGTGACCTCT
CTAACAAATCCTGACTCGTGTTTCTCCGCAGAGTCTTCTAACAGACGAGC
AGATCGCGAACGCGCCGGTTCTGATTCTAGGGAACAAGATCGACAAACCG
GGCGCCGCCAGCGAAGAGGAACTCAGGCAGTGGTTCGGCTTGCACGGACA
GACGACCGGAAAGGTTTGTTTGTTTGTCTGTTTGTTAGTTTAGAATCGCC
ATTAGTGAAATACATCATCTGCTTGCTAGTCTTCCTGGAGTCCTTTTCTT
ATACTAGTTACAAGCATGAATACAATGTGATACTATTACAATTCAACAAA
CAACCTTAATCAAACTTGTTCATGGTTCCAACAGTGCATGTGCAGCAAAA
TGCATTGTGACTTAACAAACTAGAGAGACTCAATATTTTGTAAATTCTTA
GTAACCGTTTTTTTGTGGCGTACCTATAAAAGATACGACTGATTGATTGT
GTGTGTGTGTTGTTTCCAGGGCAATGTGCCGCTCCATGAATTGAACACAC
GGCCTGTGGAGTTGTTTATGTGCAGTGTACTGAAGAGGCAAGGGTACGGG
GAGGGCTTCCGCTGGCTGGCACAGTACATCTAG Coding sequence (CDS) from alignment at Sc0000006:7039576..7042558+ >transcript:BL95131_evm2 ID=transcript:BL95131_evm2|Name=transcript:BL95131_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2760bp|location=Sequence derived from alignment at Sc0000006:7039576..7042558+ (Branchiostoma lanceolatum)
ATGCTGCACTATTTAGGTCTGCGGAAAAAGTCAGGGAAGCTGGTGTTCCT
GGGCCTGGACAACGCGGGGAAGACGACCTTGCTGCACATGCTGAAGGACG
ACAGAATGGCGCAGCACGTCCCCACGTTACACCCCACCTCCGAGGAGCTC
GAGATGGGCGGCATGCGCTTCACCACCTTCGACCTCGGGGGTCACGCACA
GGCGCGGCGAGTGTGGAAAGATTACCTCCCAGCGATAAACGGCGTGGTGT
TCCTCATCGACGCGGCCGACAGGTCCAGGTATAAGGAAGGCAAGGAGGAA
CTGGACAGTCTTCTAACAGACGAGCAGATCGCGAACGCGCCGGTTCTGAT
TCTAGGGAACAAGATCGACAAACCGGGCGCCGCCAGCGAAGAGGAACTCA
GGCAGTGGTTCGGCTTGCACGGACAGACGACCGGAAAGGGCAATGTGCCG
CTCCATGAATTGAACACACGGCCTGTGGAGTTGTTTATGTGCAGTGTACT
GAAGAGGCAAGGGTACGGGGAGGGCTTCCGCTGGCTGGCACAGTACATCT
AGATGCTGCACTATTTAGGTCTGCGGAAAAAGTCAGGGAAGCTGGTGTTC
CTGGGCCTGGACAACGCGGGGAAGACGACCTTGCTGCACATGCTGAAGGA
CGACAGAATGGCGCAGCACGTCCCCACGTTACACCCCACCTCCGAGGAGC
TCGAGATGGGCGGCATGCGCTTCACCACCTTCGACCTCGGGGGTCACGCA
CAGGCGCGGCGAGTGTGGAAAGATTACCTCCCAGCGATAAACGGCGTGGT
GTTCCTCATCGACGCGGCCGACAGGTCCAGGTATAAGGAAGGCAAGGAGG
AACTGGACAGTCTTCTAACAGACGAGCAGATCGCGAACGCGCCGGTTCTG
ATTCTAGGGAACAAGATCGACAAACCGGGCGCCGCCAGCGAAGAGGAACT
CAGGCAGTGGTTCGGCTTGCACGGACAGACGACCGGAAAGGGCAATGTGC
CGCTCCATGAATTGAACACACGGCCTGTGGAGTTGTTTATGTGCAGTGTA
CTGAAGAGGCAAGGGTACGGGGAGGGCTTCCGCTGGCTGGCACAGTACAT
CTAGATGCTGCACTATTTAGGTCTGCGGAAAAAGTCAGGGAAGCTGGTGT
TCCTGGGCCTGGACAACGCGGGGAAGACGACCTTGCTGCACATGCTGAAG
GACGACAGAATGGCGCAGCACGTCCCCACGTTACACCCCACCTCCGAGGA
GCTCGAGATGGGCGGCATGCGCTTCACCACCTTCGACCTCGGGGGTCACG
CACAGGCGCGGCGAGTGTGGAAAGATTACCTCCCAGCGATAAACGGCGTG
GTGTTCCTCATCGACGCGGCCGACAGGTCCAGGTATAAGGAAGGCAAGGA
GGAACTGGACAGTCTTCTAACAGACGAGCAGATCGCGAACGCGCCGGTTC
TGATTCTAGGGAACAAGATCGACAAACCGGGCGCCGCCAGCGAAGAGGAA
CTCAGGCAGTGGTTCGGCTTGCACGGACAGACGACCGGAAAGGGCAATGT
GCCGCTCCATGAATTGAACACACGGCCTGTGGAGTTGTTTATGTGCAGTG
TACTGAAGAGGCAAGGGTACGGGGAGGGCTTCCGCTGGCTGGCACAGTAC
ATCTAGATGCTGCACTATTTAGGTCTGCGGAAAAAGTCAGGGAAGCTGGT
GTTCCTGGGCCTGGACAACGCGGGGAAGACGACCTTGCTGCACATGCTGA
AGGACGACAGAATGGCGCAGCACGTCCCCACGTTACACCCCACCTCCGAG
GAGCTCGAGATGGGCGGCATGCGCTTCACCACCTTCGACCTCGGGGGTCA
CGCACAGGCGCGGCGAGTGTGGAAAGATTACCTCCCAGCGATAAACGGCG
TGGTGTTCCTCATCGACGCGGCCGACAGGTCCAGGTATAAGGAAGGCAAG
GAGGAACTGGACAGTCTTCTAACAGACGAGCAGATCGCGAACGCGCCGGT
TCTGATTCTAGGGAACAAGATCGACAAACCGGGCGCCGCCAGCGAAGAGG
AACTCAGGCAGTGGTTCGGCTTGCACGGACAGACGACCGGAAAGGGCAAT
GTGCCGCTCCATGAATTGAACACACGGCCTGTGGAGTTGTTTATGTGCAG
TGTACTGAAGAGGCAAGGGTACGGGGAGGGCTTCCGCTGGCTGGCACAGT
ACATCTAGATGCTGCACTATTTAGGTCTGCGGAAAAAGTCAGGGAAGCTG
GTGTTCCTGGGCCTGGACAACGCGGGGAAGACGACCTTGCTGCACATGCT
GAAGGACGACAGAATGGCGCAGCACGTCCCCACGTTACACCCCACCTCCG
AGGAGCTCGAGATGGGCGGCATGCGCTTCACCACCTTCGACCTCGGGGGT
CACGCACAGGCGCGGCGAGTGTGGAAAGATTACCTCCCAGCGATAAACGG
CGTGGTGTTCCTCATCGACGCGGCCGACAGGTCCAGGTATAAGGAAGGCA
AGGAGGAACTGGACAGTCTTCTAACAGACGAGCAGATCGCGAACGCGCCG
GTTCTGATTCTAGGGAACAAGATCGACAAACCGGGCGCCGCCAGCGAAGA
GGAACTCAGGCAGTGGTTCGGCTTGCACGGACAGACGACCGGAAAGGGCA
ATGTGCCGCTCCATGAATTGAACACACGGCCTGTGGAGTTGTTTATGTGC
AGTGTACTGAAGAGGCAAGGGTACGGGGAGGGCTTCCGCTGGCTGGCACA
GTACATCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:7039576..7042558 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95131_evm2 |
| Biotype | protein_coding |
|
