|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95125_evm4 >transcript:BL95125_evm4-protein ID=transcript:BL95125_evm4-protein|Name=transcript:BL95125_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=205bp
MAPKYKLTYFNVRARAEPTRLLFAAAGVEFEDVRVLREEWPALKPKTPMG
FLPILEVDGVTLSQSMSIARFVARETGMDGKTKLERAQADAFVDELQGLV
PKLGGLLIFTTDEKEKEEKAKEVDQLIEEKLGKCEKLSGADGHLVGNSLL
WCDLVLYNIAQTIEEIYKPGTLQNYPKLAKVYATVKANPRIAKWNAERPT
GRIDI Run BLAST on NCBI mRNA from alignment at Sc0000006:4873187..4879664+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95125_evm4 ID=transcript:BL95125_evm4|Name=transcript:BL95125_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=6478bp|location=Sequence derived from alignment at Sc0000006:4873187..4879664+ (Branchiostoma lanceolatum)
ATGGCTCCTAAGTACAAGCTGACTTACTTCAACGTCCGAGCTCGCGCGGA
ACCCACCAGGCTGCTGTTCGCTGCCGCCGGAGTAGAGTTCGAGGATGTGA
GGGTGCTGCGGGAGGAGTGGCCGGCTCTCAAACCGAGTGAGTCATGATAC
AGTACCAGTGAAATGGTCTATGGGTAGAGTATCTATATCTCTGGTACATG
GTAAAACCGCCCTTCGGATGTATGTCCTTCACCGCCAAATATTAAAAGCC
AGCAGATTCAGTACTTAGATTAGACATAATATTCCTTGTGATACATGCTC
ATGAGATCACTTCCTTTTCAGAGACTCCTATGGGGTTTCTTCCCATTCTC
GAGGTGGACGGTGTCACACTCAGTCAGAGCATGTCAATAGCTCGCTTCGT
TGCCAGGGAGACGGGTGAGTGTGCTCATGAGGTTTGAATTTGATTACATC
TGTTGAAAAATGTGTGCTTACTTGGCTACGGGCGGGTCTATGGTTGACAA
TCTGTTTGCAGCCATGCCTCGGCAAATTTTCATGCTGTTCTCCGGTCCTC
TTCGGATTGACTGACCTCGGTATCTCACATCACGTGACCTTACTAAAGCA
TGACGTAAGCAATGTATCTGCAATTACAGCAACTTCCATGTGTCACAGGA
GGGACGTATGTTATAATGTCCGTCAACATTTGAACGTATCCGGAGGTTCG
ATCGAACTTAAATCTAGTAGGTTCAAAGTCCATTCGATCGAACGTAGATC
GAGCATGTTCGAACGCATTGGATCGAAAGTAGAGTCAGTTCTCTAAACTG
CAAAAATAAAGGATTTTCAGTAAATTTTGGAGCCAATTGAAATCAGTTTT
ATGGTTTTGATTTTCCGTCCCAAATGTGGGATTCATCAGGCTCCAGGCTG
AAGTCACCCGAATTTTTCTACAGGAATCTAAACGCTGACATTTTGGGCAT
ACGCAACAGAAATTTTATTTTATTTGAACGAGAGGATCGTTTTGAAACTA
TCTATGACAATTGACAGATTCACAGGCTCTCCGGCAACGGCTCGCGGGAG
CCCGCGGGCGCCTCCGGTAACCTGATAGCCCCTGTGACCGGCGTTAATTG
ACTCGCGTTCGATCGAGCGTGAATCTTGCATGTTCGAACGCGTTCGAATG
TTCGCAGAAATGTCGTACGGCGTGCTCCTGAATTGCAAGCAATCCACAGG
AGCATGAATGTATCTCTGTGGTCTACTCTTGTAGGTATGGACGGTAAAAC
CAAACTGGAGCGGGCCCAGGCCGACGCCTTTGTCGACGAGATAGAAGGAT
TGGTGCCGAAACTCGCTGGTCTGTTGGTATTCACCACTGATGAGAAAGAG
AAGGTATTTTGTATCTTTATTTTTGTTAACGTTGACTTGCATCTATCATT
ATTAGCTTGTATCTATTGTTACATTTCGTGTTGTATTGAAAAGTTAGAAT
TTGTAATGCACGATCATACCAGGTATTGTTGCCTAGTGTTACATGCTGTA
TATATTGTTTTGTTCAGTTGCCAGCCAAATAAAGTCAAAGAAGGTGCTTT
TCTTCTACTTTGTTACCACCGAACCAGGACATTGACTGACTTACTACGCG
TTCATATATCCTATCTTAGGAGGAGAAAGCTAAGGAAGTGGATCAGCTGA
TTGCAGAGAAATTCGGCAAGTGTGAGAAACTGAGCGGCTCTGATGGGCAT
CTAGTAGGGAACAGTGTAAGTACAAGGAAAATGAGTGAATTGGTGAGTGA
GTGAGTGAGTGAGTGAGTGAGGGTGATTAGGTGTGTGGCGGGTTGATTTA
CTGTTTAAAAACTAGTCAGATACTGTACTGTTTGATACTGTTCATAGAAA
AACCAGTACAGAAAAAAGTTTGAATTCTCTGACAGTTATTACGGTAATCT
GTCCCTGCTATTGTCCCAGGCTGGCAGACATCTAATCCTTTTATGAATTT
ATGTGGTTATGAGGAATTAATCCAGCCCTCAAGCTGCTGGCCAGCTCACA
GTAGGAGCACTCCCTTTATGACTTGTCCAGGGCAAATTTTGGGTTCCTTT
AAAAAAAGACCCTCACAAAAATTGGAGGCTCTCGGGAAATCTAGGTCCGA
TGTTTAAAATAATGTTTGTAGCGTTTGTGTGAATAGTTGATCATCAATCT
CCAACCTTTCCAACTTGATTCTTTTATTGCGTTGACCGAAAACTTGATCT
TGAAAACAAACTTCAGCAATTATCCCATAGAAACCAATACTGAGAGGATG
ATTCTCATCATGCATCATATCCCATGGGTCTTCATGAAGGGGCACCACTC
AATTTCTGTTTGATTTTGTATTCATTAAGATGTAATCTCTTACAAATAAC
ACCCGCTTCTGGGGTGTGTGTATGCCTTTAGTAGTGGTGAAGAATTATAC
CATTTCTGTATTCTTTCCAGATGCTTTGGTGTGATCTGGTGTTCTTTAAC
TTAGCGCAGACCATCGAGGAGGTCTACAAGCCGGGAACCCTGCAGAACTA
CCCCAAACTGGCCAAGGTGTACGCCACGGTCAAGGCCAACCCGCGCATCG
CCAAATGGGTTGCCGAGCGCCCGACCGGGCAACTCAAAATCTGAAGGGAT
GCTGGAGTATGTTAGACGATGTCACCGAGGGCAGCTGGAGATGTCGTTTT
CATCACTTAGATGTAGGATCCGGCTTGTTTCACACGTGTTTTGGAGTGAT
TTTGTACGTATTTGGAATGGCCCAACGTTTCTTCGCCTTTCATTTTAGGC
CAAAACGTGGACAACTAGAACTGGAAAAAACTACAAAATGCCAAATAAAC
GTGTAGACAAGCCCGACCCCCCATCTGCTTAAAGATTACTGCCATTTCGG
GCAACTTGTACTAAAATCATGAAATAAACCAGGCCTGGCGTCCTTTTGAT
ACAGAATTAATGCCATTTTTCTTCCATTTCACAGAACGAAGTGGTTTGTA
CACTCCCACGAACTTCCGTTTAAACCATTTTCTCCCAGTGGGTATATGGC
TATGAATTTTGAGTCTGAGAGATTGTATGAAGGAAAGAAAAAAATGAGTG
AGTGGATGAATGAACGAATGATGTAACGTCCGTTAACCTTTATTCGACAG
TCTCATAATCCGTCAAATTTCAGAAGTCAGCAGTCATTAAAAAAAATAGC
TCTGGTATGCAAATTCGTTCTAGTGGTTTGCAAAAATACGACAAAAAAAT
TTTAAAGCTCAAAAAGATCGCATATTGTAGTGACAAGTGCATCAATCTTC
CGGCTTGTTTTCATACCGTCACTCACTGCGTGTCAGGGCGATAGCGGTCC
GGATTTCGATGAATCCTACGTTACTCTTTTCTTCGCCAAATTTAACCCCA
TGCATCATAAGTTGACACAAGAAAAGTAGAGTCGAAAGTCACGACTGACC
AGAATGCGAAGGGTTAATCAATGACAGTGTTTTCCCTCAAGCCATCGAGA
CGAGGTGATTGGATTTGAAAGAGCAGGCAAGTTACACCTTATGTGTGCAT
GTCAAATACTATTCAAAAGACGCCATAGCAACAGTGTCACCGTGACAGGC
AAGGTGTTGACTTTTCTGTCGATAACATTCTCCCGGGACGGGATGATCCA
TTGAAAACAGAGGACAATATCAGTCGTAAACAAACGACTAATTTCTTCAT
CAATTAGTGTTTTATCTAAGACTACACAGTCTCCACATACATCTGTTATC
ACTCGCTGCACATGCAACTGTTTGTAGTCGTGTCTTACTCTCTTTGATGG
TATGTCCCCTTTAAACAACCGCCGAGCATATTTGCACCTGTCGAAGATAG
GGACCGCTCATTCTAGTTCGGCATTTAGACGCTGTTAGTTTTTTCTCCGT
TCCCGCTGCAACAACGCGCCGCAAAGTATCCAGGATGGCTCCTAAGTACA
AGCTGACCTACTTCAACGCCCGAGCTCGCGCGGAACCCACCACGCTGCTG
TTCGCTGCCGCCGGAGTGGAGTACGAGGATGTCAGGCTAACGTTTGAGGA
GTGGCCGCCAATCAAACCGAGTAAGTCATGGTACAAAACTGGTCTATGGG
GCTATGGGGGAAGAGGGTGCTGCCAGGGGAGTGGCCGTCTCTCAAACCGA
GTGAGTCATGATACAATACCAGTGAAATGGTCTATGGGTAGAGTATCTAT
ATCGCTGGTACATGGTAAAACCGCCCTTCGGGTGTATGTCCTTCACAGCC
AAATGATAATGAATATCCAAAGCCAACATATTCAGTAGTTAGATTAGACA
TAATATTCCTTGTGATACATGCTCATGAGATCACGTCCTTTTCAGACACT
CCTATGGGTAATCTTCCCATTCTCGAGGTGGACGGAGTCACACTCAGCCA
GAGCATGTCGATAGCTCGCTTCGTTGCCAGGGAGACGGGTGAGTGTGTTT
ATGAGGTTTGAATTTGATTACATCTGTTGAAAAATGTCTGCTTACTTGGC
TACGGGCGGGCCTATGGTTAACGAACTGTTTGCAGCCATGACTCGGCAAA
TTTTCATGCTGTTCTCCGGTCCTCTTCGGATTGACTGACCTCAGTATCTC
ACATCACGTGACCTTACTGAAGCATGACGTAAGCAATGTATCTGCAATTA
CAGCAACTTACATACGTCACAGGAGGGACGTATGTTATAATGTCCGTCAT
CATTCGAACGTATCCGGAGGTTCGATCGAACTTAAATCTAGTAGGTTCAA
AGTCTATTCGATCGAACGTAAATCGAGCATGTTCGAGGACACTGGATCGA
AAGTAAATCTAGCATGTTCGAACGCGTTCGATCGAGCGTGAGTCTTGCAT
GTTCGAACGCGTTCGAATGTTCGCAGAAATGTCGCAAGCAATCCATAGGA
GTATGAATGCATCTGTGTGGTCTACTGCTTTAGGTATGGACGGTAAAACC
AAACTGGAGCGGGCCCAGGCCGACGCCTTTGTCGACGAGTTACAGGGATT
GGTGCCGAAACTCGGTGGTCTGTTGATATTCACCACTGATGAGAAAGAGA
AGGTATTTTGTATCTTTATTTTTGTTAACGTTGACTTGCATCTAACATTA
TTAGCTTGTATCTATTGTTACATTTCGTGTTGTATTGAAAAGTTAGAATT
TGTAATGCACGATCATACCAGGTATTGTTGCCTAGTGTTACATGATGTAT
ATATTGTTTTGTTCAGTTGCCAGCAAAATAAAGTCAAAGAAGGTGCTTTG
TTGTGCTTTTCTTCGACTTTGTTACCACCGAACCAGGACATTGACTGACT
TACTACGCGTTCAAATGTCCTATCTTAGGAGGAGAAAGCGAAGGAAGTGG
ATCAGCTGATCGAAGAGAAACTCGGCAAGTGTGAGAAACTGAGCGGCGCT
GATGGACATCTAGTAGGGAACAGTGTAAGTACAAGGAAAATGAGTGAATG
GGTGAGTGAGTGAGTGTGATTAGGTGTGTGGCCGGGTGATTTACTGTTTA
AAATCTTGTCAGAACGGTCACATGGGAAATAAAAGCTCCTTTAAGACTTG
TTTGAATTTCTTAAATTGCAGACCCGTTTTTCGAAATTCTGCAATATGGT
ATACATACACATCTTCAGCTACTACCAGTGAAAAAGATATCGACCTACCA
CACGCAAATGAACACTTGAACCATACACAAGACCAGAGGAGAGTGTTCCG
GTATGGCTAATAATATTCTGGACTCTGCAGCAGTTGCACTATACAGCATC
AATATTCTGATAACCCCCGGAGTACCCTTCAGATCAATTACAGCCAAGTG
CAACATGTTATATCGCGAACAACCATTGGACAAACTTCAACTTGGCGTTT
CTTAAAAAATCTTGGGTTGAGCTGGAAAATTGCCTTTGCGATGTATTTCT
GGAAACTTGTTTGTCAACTTATAGCCTTAGTAACTGTATTTTCCACTTAC
TTTGGGTCTTTGTCAATCATCCCATTGAAACCCATAAAAAAGACCCTCAC
AAAAATTGGAGACTCTTTGGAGATCTAGGTCCGATGCTGAAAAAAAATGT
TTGTAGCGTTTGTGTGAATATTTGATCATCAATCTCCAACCTTTCCAACT
TGATCCTTTTATTGCGTTGACCGAAAACTTGATCTTGAAAACAAACTTCA
GCAATTATCCCGTAGAAACCAATACTGAAAGAATGATTCCCATCATGCAT
CATACCCCATGGTCTTCATGAAGGGGCACCACTCAATTCCTGTTTGATTT
TGTGTTCATTAAGATGTAATCTCTTACAAATAACACCCGCTTCTGGGGTG
TGTGTATGCCTTTAGTAGTGGTGAAGAATTATACCATTTCTGTATTCTTT
CCAGCTGCTCTGGTGCGACCTGGTGTTGTATAATATAGCGCAGACCATTG
AGGAGATCTACAAGCCGGGAACTCTGCAGAACTACCCCAAACTGGCTAAG
GTGTACGCCACGGTCAAGGCCAACCCACGCATCGCCAAATGGAACGCCGA
GCGCCCGACCGGGAGAATCGACATCTGA Coding sequence (CDS) from alignment at Sc0000006:4873187..4879664+ >transcript:BL95125_evm4 ID=transcript:BL95125_evm4|Name=transcript:BL95125_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=3708bp|location=Sequence derived from alignment at Sc0000006:4873187..4879664+ (Branchiostoma lanceolatum)
ATGGCTCCTAAGTACAAGCTGACTTACTTCAACGTCCGAGCTCGCGCGGA
ACCCACCAGGCTGCTGTTCGCTGCCGCCGGAGTAGAGTTCGAGGATGTGA
GGGTGCTGCGGGAGGAGTGGCCGGCTCTCAAACCGAAGACTCCTATGGGG
TTTCTTCCCATTCTCGAGGTGGACGGAGTCACACTCAGCCAGAGCATGTC
GATAGCTCGCTTCGTTGCCAGGGAGACGGGTATGGACGGTAAAACCAAAC
TGGAGCGGGCCCAGGCCGACGCCTTTGTCGACGAGTTACAGGGATTGGTG
CCGAAACTCGGTGGTCTGTTGATATTCACCACTGATGAGAAAGAGAAGGA
GGAGAAAGCGAAGGAAGTGGATCAGCTGATCGAAGAGAAACTCGGCAAGT
GTGAGAAACTGAGCGGCGCTGATGGACATCTAGTAGGGAACAGTCTGCTC
TGGTGCGACCTGGTGTTGTATAATATAGCGCAGACCATTGAGGAGATCTA
CAAGCCGGGAACTCTGCAGAACTACCCCAAACTGGCTAAGGTGTACGCCA
CGGTCAAGGCCAACCCACGCATCGCCAAATGGAACGCCGAGCGCCCGACC
GGGAGAATCGACATCTGAATGGCTCCTAAGTACAAGCTGACTTACTTCAA
CGTCCGAGCTCGCGCGGAACCCACCAGGCTGCTGTTCGCTGCCGCCGGAG
TAGAGTTCGAGGATGTGAGGGTGCTGCGGGAGGAGTGGCCGGCTCTCAAA
CCGAAGACTCCTATGGGGTTTCTTCCCATTCTCGAGGTGGACGGAGTCAC
ACTCAGCCAGAGCATGTCGATAGCTCGCTTCGTTGCCAGGGAGACGGGTA
TGGACGGTAAAACCAAACTGGAGCGGGCCCAGGCCGACGCCTTTGTCGAC
GAGTTACAGGGATTGGTGCCGAAACTCGGTGGTCTGTTGATATTCACCAC
TGATGAGAAAGAGAAGGAGGAGAAAGCGAAGGAAGTGGATCAGCTGATCG
AAGAGAAACTCGGCAAGTGTGAGAAACTGAGCGGCGCTGATGGACATCTA
GTAGGGAACAGTCTGCTCTGGTGCGACCTGGTGTTGTATAATATAGCGCA
GACCATTGAGGAGATCTACAAGCCGGGAACTCTGCAGAACTACCCCAAAC
TGGCTAAGGTGTACGCCACGGTCAAGGCCAACCCACGCATCGCCAAATGG
AACGCCGAGCGCCCGACCGGGAGAATCGACATCTGAATGGCTCCTAAGTA
CAAGCTGACTTACTTCAACGTCCGAGCTCGCGCGGAACCCACCAGGCTGC
TGTTCGCTGCCGCCGGAGTAGAGTTCGAGGATGTGAGGGTGCTGCGGGAG
GAGTGGCCGGCTCTCAAACCGAAGACTCCTATGGGGTTTCTTCCCATTCT
CGAGGTGGACGGAGTCACACTCAGCCAGAGCATGTCGATAGCTCGCTTCG
TTGCCAGGGAGACGGGTATGGACGGTAAAACCAAACTGGAGCGGGCCCAG
GCCGACGCCTTTGTCGACGAGTTACAGGGATTGGTGCCGAAACTCGGTGG
TCTGTTGATATTCACCACTGATGAGAAAGAGAAGGAGGAGAAAGCGAAGG
AAGTGGATCAGCTGATCGAAGAGAAACTCGGCAAGTGTGAGAAACTGAGC
GGCGCTGATGGACATCTAGTAGGGAACAGTCTGCTCTGGTGCGACCTGGT
GTTGTATAATATAGCGCAGACCATTGAGGAGATCTACAAGCCGGGAACTC
TGCAGAACTACCCCAAACTGGCTAAGGTGTACGCCACGGTCAAGGCCAAC
CCACGCATCGCCAAATGGAACGCCGAGCGCCCGACCGGGAGAATCGACAT
CTGAATGGCTCCTAAGTACAAGCTGACTTACTTCAACGTCCGAGCTCGCG
CGGAACCCACCAGGCTGCTGTTCGCTGCCGCCGGAGTAGAGTTCGAGGAT
GTGAGGGTGCTGCGGGAGGAGTGGCCGGCTCTCAAACCGAAGACTCCTAT
GGGGTTTCTTCCCATTCTCGAGGTGGACGGAGTCACACTCAGCCAGAGCA
TGTCGATAGCTCGCTTCGTTGCCAGGGAGACGGGTATGGACGGTAAAACC
AAACTGGAGCGGGCCCAGGCCGACGCCTTTGTCGACGAGTTACAGGGATT
GGTGCCGAAACTCGGTGGTCTGTTGATATTCACCACTGATGAGAAAGAGA
AGGAGGAGAAAGCGAAGGAAGTGGATCAGCTGATCGAAGAGAAACTCGGC
AAGTGTGAGAAACTGAGCGGCGCTGATGGACATCTAGTAGGGAACAGTCT
GCTCTGGTGCGACCTGGTGTTGTATAATATAGCGCAGACCATTGAGGAGA
TCTACAAGCCGGGAACTCTGCAGAACTACCCCAAACTGGCTAAGGTGTAC
GCCACGGTCAAGGCCAACCCACGCATCGCCAAATGGAACGCCGAGCGCCC
GACCGGGAGAATCGACATCTGAATGGCTCCTAAGTACAAGCTGACTTACT
TCAACGTCCGAGCTCGCGCGGAACCCACCAGGCTGCTGTTCGCTGCCGCC
GGAGTAGAGTTCGAGGATGTGAGGGTGCTGCGGGAGGAGTGGCCGGCTCT
CAAACCGAAGACTCCTATGGGGTTTCTTCCCATTCTCGAGGTGGACGGAG
TCACACTCAGCCAGAGCATGTCGATAGCTCGCTTCGTTGCCAGGGAGACG
GGTATGGACGGTAAAACCAAACTGGAGCGGGCCCAGGCCGACGCCTTTGT
CGACGAGTTACAGGGATTGGTGCCGAAACTCGGTGGTCTGTTGATATTCA
CCACTGATGAGAAAGAGAAGGAGGAGAAAGCGAAGGAAGTGGATCAGCTG
ATCGAAGAGAAACTCGGCAAGTGTGAGAAACTGAGCGGCGCTGATGGACA
TCTAGTAGGGAACAGTCTGCTCTGGTGCGACCTGGTGTTGTATAATATAG
CGCAGACCATTGAGGAGATCTACAAGCCGGGAACTCTGCAGAACTACCCC
AAACTGGCTAAGGTGTACGCCACGGTCAAGGCCAACCCACGCATCGCCAA
ATGGAACGCCGAGCGCCCGACCGGGAGAATCGACATCTGAATGGCTCCTA
AGTACAAGCTGACTTACTTCAACGTCCGAGCTCGCGCGGAACCCACCAGG
CTGCTGTTCGCTGCCGCCGGAGTAGAGTTCGAGGATGTGAGGGTGCTGCG
GGAGGAGTGGCCGGCTCTCAAACCGAAGACTCCTATGGGGTTTCTTCCCA
TTCTCGAGGTGGACGGAGTCACACTCAGCCAGAGCATGTCGATAGCTCGC
TTCGTTGCCAGGGAGACGGGTATGGACGGTAAAACCAAACTGGAGCGGGC
CCAGGCCGACGCCTTTGTCGACGAGTTACAGGGATTGGTGCCGAAACTCG
GTGGTCTGTTGATATTCACCACTGATGAGAAAGAGAAGGAGGAGAAAGCG
AAGGAAGTGGATCAGCTGATCGAAGAGAAACTCGGCAAGTGTGAGAAACT
GAGCGGCGCTGATGGACATCTAGTAGGGAACAGTCTGCTCTGGTGCGACC
TGGTGTTGTATAATATAGCGCAGACCATTGAGGAGATCTACAAGCCGGGA
ACTCTGCAGAACTACCCCAAACTGGCTAAGGTGTACGCCACGGTCAAGGC
CAACCCACGCATCGCCAAATGGAACGCCGAGCGCCCGACCGGGAGAATCG
ACATCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:4873187..4879664 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95125_evm4 |
| Biotype | protein_coding |
|
