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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95118_evm2 >transcript:BL95118_evm2-protein ID=transcript:BL95118_evm2-protein|Name=transcript:BL95118_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=463bp
MKDWGMMAAGQRSPASSDFCHEPHAGALLQGLERLRSNSLLVDVILCVAG
KEILCHRNVLAACSEYFNAMFCNGLRESKEHKVTIHEVSASSMQLLVDYA
YTSKVTITELNAVKLLEGANFFQIQPVFDACTKFLSEHLCAENCLRMLDL
GGMLSPELEKKAVPFAMNEFAAVSKTPEFLNLGKDPLITLLSSDDLNASE
ETVYTAVMAWINHDTRKRRKEMKELMELVRFPFMDRMYFLENVENDSAVR
KSCPDIMMETRRYQLFPGEVQSPRTRPRCASGLREAVVVIGGTEEEFSVY
SHSIMMTCSAEPSSATWTPLTSLKQNNKYGIAVAVLGTSDIIVSEGWLSG
QVWLYHLELDNWAKLAPMNTARRKHKLAVVQGKVYAIGGKDNNGALASVE
IYDRNLNKWTEGVSLPQPRYRHAAAALDGNIYAIGGWDDKRKKTSTVYRF
SPGDSQWQLQTVF Run BLAST on NCBI mRNA from alignment at Sc0000005:3352667..3354850- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95118_evm2 ID=transcript:BL95118_evm2|Name=transcript:BL95118_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2184bp|location=Sequence derived from alignment at Sc0000005:3352667..3354850- (Branchiostoma lanceolatum)
ATGAAGGTCAGGCTTTCATGTGGGGTTTGCGGAAAAAGCTGGCCCTGTCT
ACCTGGCCTGTCTACCCTGGCTGTCTACCTTTTTTTGGCCCCCAAGGGTA
TGCATGGAGATTCCGCAATCCCTTTCATGTGAAATGCAACTGATATTAAA
GTACATTCTGTTGCATTCCAGGATTGGGGCATGATGGCAGCAGGACAGAG
ATCACCAGCATCATCCGACTTCTGCCACGAGCCACACGCAGGCGCCCTCT
TGCAGGGCTTGGAGAGACTGCGATCTAATAGCCTGCTGGTAGACGTCATT
CTTTGCGTTGCTGGGAAAGAGATTCTGTGTCACCGAAACGTCCTTGCCGC
TTGCAGTGAATATTTCAACGCGATGTTCTGCAACGGGCTTCGTGAGAGCA
AGGAGCACAAGGTGACCATTCACGAGGTCAGCGCCAGTTCCATGCAGCTT
CTCGTGGACTACGCGTACACTTCGAAAGTCACCATCACGGAACTCAACGC
TGTGAAGCTCCTGGAAGGGGCCAACTTCTTCCAGATCCAACCTGTTTTCG
ATGCATGCACGAAATTCCTGTCTGAACATCTTTGTGCTGAGAACTGTCTC
AGGATGTTAGACCTGGGTGGCATGCTGTCCCCTGAACTGGAGAAGAAGGC
AGTGCCATTTGCCATGAACGAGTTTGCAGCTGTCAGCAAGACACCCGAGT
TCCTTAATCTCGGAAAGGATCCGCTCATCACACTCCTCTCATCAGACGAC
CTCAATGCTTCAGAAGAAACAGTCTACACAGCAGTGATGGCATGGATCAA
CCACGACACCAGGAAGAGGAGGAAGGAGATGAAAGAGCTGATGGAACTGG
TCAGGTTCCCCTTCATGGACAGGATGTACTTCTTAGAGAATGTGGAGAAC
GACAGCGCAGTGCGTAAGTCTTGCCCGGATATCATGATGGAAACTCGAAG
GTACCAGCTGTTCCCAGGAGAGGTCCAGTCGCCACGCACCCGTCCTCGCT
GTGCCAGCGGTCTGAGGGAGGCAGTGGTGGTCATTGGAGGGACAGAGGAA
GAATTTTCAGTTTACTCGCACTCCATTATGATGACCTGCTCTGCTGAGCC
ATCGAGCGCAACTTGGACTCCTTTAACATCACTGAAGCAGAACAACAAGT
ATGGAATTGCTGTAGCTGTTCTAGGCACAAGTGACATCATTGTGTCTGAG
GGTTGGCTATCCGGCCAAGTATGGTTGTATCATCTAGAACTGGATAACTG
GGCCAAACTTGCTCCAATGAATACAGCTCGGCGCAAACACAAACTTGCAG
TGGTGCAAGGTAAGGTGTATGCAATTGGTGGCAAAGACAACAACGGTGCA
CTAGCTTCTGTTGAGATCTACGACCGAAACCTGAACAAGTGGACTGAAGG
TGTTTCACTCCCACAACCAAGATATCGACATGCTGCAGCAGCGTTAGATG
GCAACATATACGCCATTGGTGGCTGGGATGATAAACGCAAAAAGACGTCC
ACAGTGTACCGTTTCAGCCCTGGAGACAGTCAGTGGCAGCTACAGAGTGA
CATACCTGTAACATGTCGTAACATGTCTTCCTCAGTTCTCAATGGTAACA
TCTACGTTGCTGGGTCCCCAGGCCTTTATAGCTTTAAGCCTGGTGAAGAT
GGGGGTTCTTGGAGTGAGATAACGATCTCGGGTCTTGTTAAGAATCTAAA
TGGGATGACTACTTTTGGAGGAAAGCTTTACATCTATGGAGGCGAAGACA
TATTCAGTGGTAATGGAGTCACTTCTGTCTACTGCCTTGATCCAGAAACA
GAGTGGCTTAATCATGCAGGAGACATGCCAAAGGGTCTTTACGGCCATGG
TTGTGTCACTATACTGAAGGGGTGATGGGAGATGAATTATCGTTTACATA
AGGTTTTCCCAGCCCTAGTTTCTTTTTCATCGTCTGAGCAAACCCATGCT
CACCTTGTGTCATGATTTCAACTAAGCCCATGTTGATTTGATTATGTGGA
TGACATCTCTGGGGACCCCAAAACTGGTGCGAGTGTGCGAATGATAAAAA
AGTTTTGCAAAAAAAAGTTTCCCCATTATGAAATTCATGTGGTCAGGAAG
GATGAACAAAAGTAAACACACAGAGTATGGTATACCGAATAATAGATTTT
TCTTTTTTGTTCTTCTTTCACAGCTGTTTTCTGA Coding sequence (CDS) from alignment at Sc0000005:3352667..3354850- >transcript:BL95118_evm2 ID=transcript:BL95118_evm2|Name=transcript:BL95118_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4176bp|location=Sequence derived from alignment at Sc0000005:3352667..3354850- (Branchiostoma lanceolatum)
ATGAAGGATTGGGGCATGATGGCAGCAGGACAGAGATCACCAGCATCATC
CGACTTCTGCCACGAGCCACACGCAGGCGCCCTCTTGCAGGGCTTGGAGA
GACTGCGATCTAATAGCCTGCTGGTAGACGTCATTCTTTGCGTTGCTGGG
AAAGAGATTCTGTGTCACCGAAACGTCCTTGCCGCTTGCAGTGAATATTT
CAACGCGATGTTCTGCAACGGGCTTCGTGAGAGCAAGGAGCACAAGGTGA
CCATTCACGAGGTCAGCGCCAGTTCCATGCAGCTTCTCGTGGACTACGCG
TACACTTCGAAAGTCACCATCACGGAACTCAACGCTGTGAAGCTCCTGGA
AGGGGCCAACTTCTTCCAGATCCAACCTGTTTTCGATGCATGCACGAAAT
TCCTGTCTGAACATCTTTGTGCTGAGAACTGTCTCAGGATGTTAGACCTG
GGTGGCATGCTGTCCCCTGAACTGGAGAAGAAGGCAGTGCCATTTGCCAT
GAACGAGTTTGCAGCTGTCAGCAAGACACCCGAGTTCCTTAATCTCGGAA
AGGATCCGCTCATCACACTCCTCTCATCAGACGACCTCAATGCTTCAGAA
GAAACAGTCTACACAGCAGTGATGGCATGGATCAACCACGACACCAGGAA
GAGGAGGAAGGAGATGAAAGAGCTGATGGAACTGGTCAGGTTCCCCTTCA
TGGACAGGATGTACTTCTTAGAGAATGTGGAGAACGACAGCGCAGTGCGT
AAGTCTTGCCCGGATATCATGATGGAAACTCGAAGGTACCAGCTGTTCCC
AGGAGAGGTCCAGTCGCCACGCACCCGTCCTCGCTGTGCCAGCGGTCTGA
GGGAGGCAGTGGTGGTCATTGGAGGGACAGAGGAAGAATTTTCAGTTTAC
TCGCACTCCATTATGATGACCTGCTCTGCTGAGCCATCGAGCGCAACTTG
GACTCCTTTAACATCACTGAAGCAGAACAACAAGTATGGAATTGCTGTAG
CTGTTCTAGGCACAAGTGACATCATTGTGTCTGAGGGTTGGCTATCCGGC
CAAGTATGGTTGTATCATCTAGAACTGGATAACTGGGCCAAACTTGCTCC
AATGAATACAGCTCGGCGCAAACACAAACTTGCAGTGGTGCAAGGTAAGG
TGTATGCAATTGGTGGCAAAGACAACAACGGTGCACTAGCTTCTGTTGAG
ATCTACGACCGAAACCTGAACAAGTGGACTGAAGGTGTTTCACTCCCACA
ACCAAGATATCGACATGCTGCAGCAGCGTTAGATGGCAACATATACGCCA
TTGGTGGCTGGGATGATAAACGCAAAAAGACGTCCACAGTGTACCGTTTC
AGCCCTGGAGACAGTCAGTGGCAGCTACAGACTGTTTTCTGAATGAAGGA
TTGGGGCATGATGGCAGCAGGACAGAGATCACCAGCATCATCCGACTTCT
GCCACGAGCCACACGCAGGCGCCCTCTTGCAGGGCTTGGAGAGACTGCGA
TCTAATAGCCTGCTGGTAGACGTCATTCTTTGCGTTGCTGGGAAAGAGAT
TCTGTGTCACCGAAACGTCCTTGCCGCTTGCAGTGAATATTTCAACGCGA
TGTTCTGCAACGGGCTTCGTGAGAGCAAGGAGCACAAGGTGACCATTCAC
GAGGTCAGCGCCAGTTCCATGCAGCTTCTCGTGGACTACGCGTACACTTC
GAAAGTCACCATCACGGAACTCAACGCTGTGAAGCTCCTGGAAGGGGCCA
ACTTCTTCCAGATCCAACCTGTTTTCGATGCATGCACGAAATTCCTGTCT
GAACATCTTTGTGCTGAGAACTGTCTCAGGATGTTAGACCTGGGTGGCAT
GCTGTCCCCTGAACTGGAGAAGAAGGCAGTGCCATTTGCCATGAACGAGT
TTGCAGCTGTCAGCAAGACACCCGAGTTCCTTAATCTCGGAAAGGATCCG
CTCATCACACTCCTCTCATCAGACGACCTCAATGCTTCAGAAGAAACAGT
CTACACAGCAGTGATGGCATGGATCAACCACGACACCAGGAAGAGGAGGA
AGGAGATGAAAGAGCTGATGGAACTGGTCAGGTTCCCCTTCATGGACAGG
ATGTACTTCTTAGAGAATGTGGAGAACGACAGCGCAGTGCGTAAGTCTTG
CCCGGATATCATGATGGAAACTCGAAGGTACCAGCTGTTCCCAGGAGAGG
TCCAGTCGCCACGCACCCGTCCTCGCTGTGCCAGCGGTCTGAGGGAGGCA
GTGGTGGTCATTGGAGGGACAGAGGAAGAATTTTCAGTTTACTCGCACTC
CATTATGATGACCTGCTCTGCTGAGCCATCGAGCGCAACTTGGACTCCTT
TAACATCACTGAAGCAGAACAACAAGTATGGAATTGCTGTAGCTGTTCTA
GGCACAAGTGACATCATTGTGTCTGAGGGTTGGCTATCCGGCCAAGTATG
GTTGTATCATCTAGAACTGGATAACTGGGCCAAACTTGCTCCAATGAATA
CAGCTCGGCGCAAACACAAACTTGCAGTGGTGCAAGGTAAGGTGTATGCA
ATTGGTGGCAAAGACAACAACGGTGCACTAGCTTCTGTTGAGATCTACGA
CCGAAACCTGAACAAGTGGACTGAAGGTGTTTCACTCCCACAACCAAGAT
ATCGACATGCTGCAGCAGCGTTAGATGGCAACATATACGCCATTGGTGGC
TGGGATGATAAACGCAAAAAGACGTCCACAGTGTACCGTTTCAGCCCTGG
AGACAGTCAGTGGCAGCTACAGACTGTTTTCTGAATGAAGGATTGGGGCA
TGATGGCAGCAGGACAGAGATCACCAGCATCATCCGACTTCTGCCACGAG
CCACACGCAGGCGCCCTCTTGCAGGGCTTGGAGAGACTGCGATCTAATAG
CCTGCTGGTAGACGTCATTCTTTGCGTTGCTGGGAAAGAGATTCTGTGTC
ACCGAAACGTCCTTGCCGCTTGCAGTGAATATTTCAACGCGATGTTCTGC
AACGGGCTTCGTGAGAGCAAGGAGCACAAGGTGACCATTCACGAGGTCAG
CGCCAGTTCCATGCAGCTTCTCGTGGACTACGCGTACACTTCGAAAGTCA
CCATCACGGAACTCAACGCTGTGAAGCTCCTGGAAGGGGCCAACTTCTTC
CAGATCCAACCTGTTTTCGATGCATGCACGAAATTCCTGTCTGAACATCT
TTGTGCTGAGAACTGTCTCAGGATGTTAGACCTGGGTGGCATGCTGTCCC
CTGAACTGGAGAAGAAGGCAGTGCCATTTGCCATGAACGAGTTTGCAGCT
GTCAGCAAGACACCCGAGTTCCTTAATCTCGGAAAGGATCCGCTCATCAC
ACTCCTCTCATCAGACGACCTCAATGCTTCAGAAGAAACAGTCTACACAG
CAGTGATGGCATGGATCAACCACGACACCAGGAAGAGGAGGAAGGAGATG
AAAGAGCTGATGGAACTGGTCAGGTTCCCCTTCATGGACAGGATGTACTT
CTTAGAGAATGTGGAGAACGACAGCGCAGTGCGTAAGTCTTGCCCGGATA
TCATGATGGAAACTCGAAGGTACCAGCTGTTCCCAGGAGAGGTCCAGTCG
CCACGCACCCGTCCTCGCTGTGCCAGCGGTCTGAGGGAGGCAGTGGTGGT
CATTGGAGGGACAGAGGAAGAATTTTCAGTTTACTCGCACTCCATTATGA
TGACCTGCTCTGCTGAGCCATCGAGCGCAACTTGGACTCCTTTAACATCA
CTGAAGCAGAACAACAAGTATGGAATTGCTGTAGCTGTTCTAGGCACAAG
TGACATCATTGTGTCTGAGGGTTGGCTATCCGGCCAAGTATGGTTGTATC
ATCTAGAACTGGATAACTGGGCCAAACTTGCTCCAATGAATACAGCTCGG
CGCAAACACAAACTTGCAGTGGTGCAAGGTAAGGTGTATGCAATTGGTGG
CAAAGACAACAACGGTGCACTAGCTTCTGTTGAGATCTACGACCGAAACC
TGAACAAGTGGACTGAAGGTGTTTCACTCCCACAACCAAGATATCGACAT
GCTGCAGCAGCGTTAGATGGCAACATATACGCCATTGGTGGCTGGGATGA
TAAACGCAAAAAGACGTCCACAGTGTACCGTTTCAGCCCTGGAGACAGTC
AGTGGCAGCTACAGACTGTTTTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:3352667..3354850 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95118_evm2 |
| Biotype | protein_coding |
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