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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95113_evm1 >transcript:BL95113_evm1-protein ID=transcript:BL95113_evm1-protein|Name=transcript:BL95113_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=398bp
MLKEGSFNLTAVSNNSLSVPVQSGHIGITSLDFIVNQGTNATALDYTVKV
LRARPPVDEALNYILIPFLVVNAFAMGTAVEWPLVVKVLKRPYGVAIGAL
SQFVFMPLLAFILSKAFSLADVYAIGLLMVGSSPGGGLSNILTFFLDADL
PLSMTMTFVSTVLALGMMPLSLFIYGRAFNFDRINVPYSTIVTSLVPVTI
AKVLGILLRHKKPRIADKVMKAIRPFSALFVIAFVVLGFMVNTHFIYTPW
QPIVADFLLPLAGFIIGFGLAKMLCLDNTRAKTVSIETGVQNGRLASAMI
RLAFPQPEADLSFCVSFLNGMFQVGIGLLAVAVYNIYKCKNPTTEEVKMT
NLEGLENPTTEEEKIANLEGLENPTTEEEKITNLEGLENPIVISDVKE Run BLAST on NCBI mRNA from alignment at Sc0000005:1133170..1137818- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95113_evm1 ID=transcript:BL95113_evm1|Name=transcript:BL95113_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4649bp|location=Sequence derived from alignment at Sc0000005:1133170..1137818- (Branchiostoma lanceolatum)
ATGCTGAAAGAGGGCTCGTTCAACCTAACCGCTGTGTCCAACAACAGTTT
ATCGGTACCTGTACAATCCGGGCATATAGGTATCACATCCCTGGACTTCA
TTGTGAACCAAGGAACAAATGCTACAGCTCTCGATTACACTGTCAAGGTG
TTGAGGGCCCGACCGCCAGTGGATGAAGCTCTGAACTACATTCTCATCCC
GTTCCTGGTCGTCAACGCTTTCGCGATGGGCACTGCGGTGGAGTGGCCTC
TTGTGGTGAAGGTGTTGAAGAGACCGTACGGTGTAGCTATAGGAGCGCTG
TCTCAGTTCGTCTTCATGCCACTGCTGGCCTTCATCCTTTCCAAGGCGTT
CTCCCTTGCGGACGTCTATGCTATAGGTAAGCATCGTTCGTTCGCTCAGA
CACTTGCTGTTTCAGTAGCAGGAGATTTTTTTTACTGGGAGGGGTTGCTA
GCCATTCCCCATTAATTCCCCAATCATTTTGCATCCCTTCCGAAAGACGA
TACAGCCTCAACCGAGATGTTCTGACCCCGGCCCTTGAACCGGGATTTGC
AAGTTCCAAGGCTGCTCAAAAGTAGGTTATTCTATCATAGAAGTCTGTTC
TGTCTGCTCAATAACAACCATTGATCTCAGTTTGTCTTCATGCACATTGC
TGGCCTTCAGTTTTTCCAATGTGTTTCCCTTGCCGTCGTCTATGCTAGAG
GTATGCTTGAGTAAATATTACCTTGCGAAAGTCATTTTTTCTCTTCAGAT
ACTACCGCATGCCATGAGTTATATTTGGGGATTATCAAGTGAAGTAAAAT
GATAAGATGCATAGGTTTTGCGTATAAGGATTCGGGGTAGATTCAAATTT
TCGAACCCTAGTCATGAGCGTAAATGGCTATACCCGCACACGCGAATCCT
AGTATAAACGGGGTGTATGTACCGGTCACGTTAGACATGATTGAGGTTCA
GTGCAAAGACTGAACACGGCGACGAAAGCATTTGACCTGTTTGTTGTTTG
CCAAGTTTGGGAGGTGCCAGTCTCGGTTCAGTACCTGCTCAGGGTAACAT
CAGCTAGCGAGTCTGGTAATGCCCTTGCGGTCAGCGACCCTTGTGAACAA
ACGGTAACTTTGAGGCACATAGCCCTACGGTCACCGACCTCACGTCGACC
AGGTTTCTCCCATTCTGCCCCACCCAAACTCAAAGGAGGGCCTGCATGCC
CCTTTTACGTAGAGCGTAATCGGCCGTTTTAATTTTACGTAGAACGTTGC
CGACCTCTCCATAATTTAGCGTAGAGCGTAGGGGGAGCTTTCTGAATTTA
GCGTAGAGCGTAGGGAGGCTTTCTGAATTTAGCGTATTACGTAGCCGGCC
CTCCGAATTTAGCGTAGAACGTTGTAGGGACCCCCCATGCAGGCCCTCTC
AAAGGTGTGGGTACAGGGACTTTTCGGTTACAGTCGTACGGTCAGCGACT
CTTGTGGTACATAATGTTCGCCGCTGTACTTCTCCTATTCTGCCCCACCC
AAACTCAAAGGTGTGGGTACAGAGACTTTACGGCNACATGTACAGAGACT
TTTCGGCAATATGCTTGCAATCGCTCTAGCTAGACTCATGAGTTTTGTTC
GCGTGTGGCGTAAGCAATGGGTCGAAGGTCGTTCGAAGTTGATAGATGAG
AGAAGAAGCCTGGTGCACCCTGATGTAGATGGCCTCCTTTACTCCTCTCA
CAAAGTAGTCATGTTTGGTGTACATAGCCTGGGTGCCATCCTAATTTCTA
CCGGGGCTCCTACACTCGCTTTGAGGGTAGCAAGTGTAGGAGCCCCGGTA
GAAATTAGGATGGCACCCAGGCTATGGTGTACATGCATGTAATACAAAAC
TATTGACTATTGACATAACAGAAAGAGGCTATTGCCTGTAAGTTCTGTTT
CTAAACAACAATATGAAATACATAAATGCCCAGAGTCACGAAAATTCTTA
CAACAAGGTACATACCTTTGAAAATATGTAAGTCCAACTGTAAGTTAAAC
TATTTTCAAGGCAGTCAAAAAGTCCTCAGCCAGCCTCCTGTATGTGTGTC
ATCATATGGCAGTATGTCTGTGTTCTGGACCACTTGCAGAAATTCTAATT
TGTGAACATATAAAATGAGTTTGCGATGCAAATGATCCACTCCTGTTACG
ACCAGGTCTCCTGATGGTCGGATCCTCCCCGGGAGGCGGACTGAGTAACA
TCCTGACGTTCTTCCTGGACGCTGACCTTCCCCTCAGCATGACCATGACC
TTCGTGTCAACCGTCCTGGCTCTGGGGATGATGCCGCTCTCACTCTTCAT
CTATGGACGGGCGGTGAGTTCACATTCTCCTACGCAGGGCCTCGCCCGCA
GCCTATACAATATAGGGAGGCTTAGGATAGGCGTATGATAGCATTGTTGA
GCATCTACAAAGGTTTGTCCACAACAAGTGAAACAGCTTGCCATGTAGCG
AAACGTACTGTAGCGAACTGGCAATTTAGCGAAACAACCTGTAACCACCT
GTTACAGGTTTGCGTAGCAAAACCTTTGTTGGATCCATTGGCATGAGTGG
TGGCCGCCATCTTGATTTTGTGACGTCGCAGGGTAGCCATACCATTTCAT
TGGGAGGGGTGTTTTTTGGGTCCGGTAGCGTTCTCTCTATTTTTAACAAA
TCGGCACACAACTATCACACATTCAACAATAAAAAGAAAAATTCAATACC
AATTCAGACCCCGTAATCGCTAAACTAACATAGCAAACCTGAAGTATATG
TAGCACAAATACTTAACCCTAGTATTCAATGTTTTAGTTCAACTTTGATA
GAATCAACGTGCCCTACTCGACCATCGTCACGTCCCTCGTCCCCGTCACC
ATCGCCAAGGTGCTGGGGATCCTCCTGCGGCACAAGAAACCACGCATCGC
CGACAAGGTCATGAAGGCGATCCGGCCCTTCAGCGCGCTCTTCGTCATCG
CTTTCGTCGTTCTCGGTTTCATGGTCAACACTCACTTCATCTACACGCCT
TGGCAGCCCATCGTGGCAGACTTTCTGTTGCCGCTGGCTGGATTCATCAT
CGGTGAGTTCGCCGTCTGGCGCTAGACACTAGCCTCCTTTGCAGGCCTAC
CAGGCGGCGCCGGCGATACTTTTTCTCGTTGTCGGGGGCTTGTTAGGTCC
TCCCCGAGAAAAGTGGAAGGGTTGCATGCAAGAAGCTTGATTCCGTCTAG
CCTCCTTTGCAGGCCTCCCGGGCGGCGTCGGTGATAATCTTTTGGGGGAG
AGCTGATTCGCGATTTTCAAGTTATCGGGGCCAGGGTCAGTTTTGCTGGG
GATCCATAGGCGTCAGGACGGGTTCCCCAGCAATACGGGTTCCTCAACAA
AAGACCTGGCCCCGATAAGTTGAAAATTGCGAATCAGCGCTCCCCCAAAA
GATTATCGCCGGCACCGCCCACAAATGAGGCTAGACGGAATCAAGCTTCT
AGCATGCAGCCCTTCCACTTTTCTCGGGGCTCGGGGAGGACCTAACAAGC
CCCCGAGAACGAGAGATTGTAAAACACAGGCTAGCCTATGTGTTAGGCCT
AGAAGCCCCTCCCCCAGTAATGTGCGTAAAATCATCAGATAAATCTATTA
GACTAGACATTTTTTCTTCTTCACCTTTTTACATTATCTGTCTGTGTATT
CCCTTGCATCAATGGTAGTTCTTGGGAAAATGACAGCGGAGACTGGTATT
CGACCGGTTTCGACTTTATTGTCTTTTTCAAGAATGTATTGTATGTGTAT
TCCCTTGCAGTTATCTTTTAGGCATGAGCTTGCAAATAAAGATGAGGTCT
TTATGCATATCGTGACATGTAATACTCTGTAATTTCATAATCACGATACT
GTAATTCCACGTAGTACAAATTGAAATGTACCCGACAACTTCCTGGTTTA
ACCATCCAACATGAGGGCACTTACGTCATAGTCACGTGAGTACAAACACG
CAACTAGAAAGGTAACATTTACCTTCACATGATCTAGCCTGAAAAACTAT
TGCTCTGTTAATTCTTACTCGAACACATTAACATTTATGGTGACCGGCCC
CTCCAGCTCTGTCCTGCCACTTGCTACATAATGTAATAGAACATCACAGG
GGGTCTACTACTTTTCCGGTAACCATAGTGACAGCCGCCTAGTCCATGTC
ATTGAACTTATTTGCTTGGAACGGAAGAAGAAACGGGGAAGGTAAATATT
ACACGCATTGGTGGATCAGTCGCCTTACCGGATTCTCTTCTTCTCTTCCA
GGTTTTGGGCTGGCAAAGATGTTATGCCTCGACAACACCAGAGCCAAAAC
TGTCTCCATAGAAACCGGAGTGCAGAACGGAAGGCTGGCTTCCGCCATGA
TCAGGCTCGCGTTCCCACAGCCGGAAGCAGACCTCTCGTTCTGTGTGTCT
TTTCTGAACGGCATGTTCCAGGTTGGCATTGGCCTGCTAGCAGTTGCAGT
GTATAATATATACAAGTGTAAAAATCCCACCACTGAAGAAGTGAAGATGA
CTAATCTTGAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTGCA
AATCTTGAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTACTAA
TCTTGAGGGACTAGAGAATCCCATTGTGATATCTGATGTCAAAGAGTAA Coding sequence (CDS) from alignment at Sc0000005:1133170..1137818- >transcript:BL95113_evm1 ID=transcript:BL95113_evm1|Name=transcript:BL95113_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4788bp|location=Sequence derived from alignment at Sc0000005:1133170..1137818- (Branchiostoma lanceolatum)
ATGCTGAAAGAGGGCTCGTTCAACCTAACCGCTGTGTCCAACAACAGTTT
ATCGGTACCTGTACAATCCGGGCATATAGGTATCACATCCCTGGACTTCA
TTGTGAACCAAGGAACAAATGCTACAGCTCTCGATTACACTGTCAAGGTG
TTGAGGGCCCGACCGCCAGTGGATGAAGCTCTGAACTACATTCTCATCCC
GTTCCTGGTCGTCAACGCTTTCGCGATGGGCACTGCGGTGGAGTGGCCTC
TTGTGGTGAAGGTGTTGAAGAGACCGTACGGTGTAGCTATAGGAGCGCTG
TCTCAGTTCGTCTTCATGCCACTGCTGGCCTTCATCCTTTCCAAGGCGTT
CTCCCTTGCGGACGTCTATGCTATAGGTCTCCTGATGGTCGGATCCTCCC
CGGGAGGCGGACTGAGTAACATCCTGACGTTCTTCCTGGACGCTGACCTT
CCCCTCAGCATGACCATGACCTTCGTGTCAACCGTCCTGGCTCTGGGGAT
GATGCCGCTCTCACTCTTCATCTATGGACGGGCGTTCAACTTTGATAGAA
TCAACGTGCCCTACTCGACCATCGTCACGTCCCTCGTCCCCGTCACCATC
GCCAAGGTGCTGGGGATCCTCCTGCGGCACAAGAAACCACGCATCGCCGA
CAAGGTCATGAAGGCGATCCGGCCCTTCAGCGCGCTCTTCGTCATCGCTT
TCGTCGTTCTCGGTTTCATGGTCAACACTCACTTCATCTACACGCCTTGG
CAGCCCATCGTGGCAGACTTTCTGTTGCCGCTGGCTGGATTCATCATCGG
TTTTGGGCTGGCAAAGATGTTATGCCTCGACAACACCAGAGCCAAAACTG
TCTCCATAGAAACCGGAGTGCAGAACGGAAGGCTGGCTTCCGCCATGATC
AGGCTCGCGTTCCCACAGCCGGAAGCAGACCTCTCGTTCTGTGTGTCTTT
TCTGAACGGCATGTTCCAGGTTGGCATTGGCCTGCTAGCAGTTGCAGTGT
ATAATATATACAAGTGTAAAAATCCCACCACTGAAGAAGTGAAGATGACT
AATCTTGAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTGCAAA
TCTTGAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTACTAATC
TTGAGGGACTAGAGAATCCCATTGTGATATCTGATGTCAAAGAGTAAATG
CTGAAAGAGGGCTCGTTCAACCTAACCGCTGTGTCCAACAACAGTTTATC
GGTACCTGTACAATCCGGGCATATAGGTATCACATCCCTGGACTTCATTG
TGAACCAAGGAACAAATGCTACAGCTCTCGATTACACTGTCAAGGTGTTG
AGGGCCCGACCGCCAGTGGATGAAGCTCTGAACTACATTCTCATCCCGTT
CCTGGTCGTCAACGCTTTCGCGATGGGCACTGCGGTGGAGTGGCCTCTTG
TGGTGAAGGTGTTGAAGAGACCGTACGGTGTAGCTATAGGAGCGCTGTCT
CAGTTCGTCTTCATGCCACTGCTGGCCTTCATCCTTTCCAAGGCGTTCTC
CCTTGCGGACGTCTATGCTATAGGTCTCCTGATGGTCGGATCCTCCCCGG
GAGGCGGACTGAGTAACATCCTGACGTTCTTCCTGGACGCTGACCTTCCC
CTCAGCATGACCATGACCTTCGTGTCAACCGTCCTGGCTCTGGGGATGAT
GCCGCTCTCACTCTTCATCTATGGACGGGCGTTCAACTTTGATAGAATCA
ACGTGCCCTACTCGACCATCGTCACGTCCCTCGTCCCCGTCACCATCGCC
AAGGTGCTGGGGATCCTCCTGCGGCACAAGAAACCACGCATCGCCGACAA
GGTCATGAAGGCGATCCGGCCCTTCAGCGCGCTCTTCGTCATCGCTTTCG
TCGTTCTCGGTTTCATGGTCAACACTCACTTCATCTACACGCCTTGGCAG
CCCATCGTGGCAGACTTTCTGTTGCCGCTGGCTGGATTCATCATCGGTTT
TGGGCTGGCAAAGATGTTATGCCTCGACAACACCAGAGCCAAAACTGTCT
CCATAGAAACCGGAGTGCAGAACGGAAGGCTGGCTTCCGCCATGATCAGG
CTCGCGTTCCCACAGCCGGAAGCAGACCTCTCGTTCTGTGTGTCTTTTCT
GAACGGCATGTTCCAGGTTGGCATTGGCCTGCTAGCAGTTGCAGTGTATA
ATATATACAAGTGTAAAAATCCCACCACTGAAGAAGTGAAGATGACTAAT
CTTGAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTGCAAATCT
TGAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTACTAATCTTG
AGGGACTAGAGAATCCCATTGTGATATCTGATGTCAAAGAGTAAATGCTG
AAAGAGGGCTCGTTCAACCTAACCGCTGTGTCCAACAACAGTTTATCGGT
ACCTGTACAATCCGGGCATATAGGTATCACATCCCTGGACTTCATTGTGA
ACCAAGGAACAAATGCTACAGCTCTCGATTACACTGTCAAGGTGTTGAGG
GCCCGACCGCCAGTGGATGAAGCTCTGAACTACATTCTCATCCCGTTCCT
GGTCGTCAACGCTTTCGCGATGGGCACTGCGGTGGAGTGGCCTCTTGTGG
TGAAGGTGTTGAAGAGACCGTACGGTGTAGCTATAGGAGCGCTGTCTCAG
TTCGTCTTCATGCCACTGCTGGCCTTCATCCTTTCCAAGGCGTTCTCCCT
TGCGGACGTCTATGCTATAGGTCTCCTGATGGTCGGATCCTCCCCGGGAG
GCGGACTGAGTAACATCCTGACGTTCTTCCTGGACGCTGACCTTCCCCTC
AGCATGACCATGACCTTCGTGTCAACCGTCCTGGCTCTGGGGATGATGCC
GCTCTCACTCTTCATCTATGGACGGGCGTTCAACTTTGATAGAATCAACG
TGCCCTACTCGACCATCGTCACGTCCCTCGTCCCCGTCACCATCGCCAAG
GTGCTGGGGATCCTCCTGCGGCACAAGAAACCACGCATCGCCGACAAGGT
CATGAAGGCGATCCGGCCCTTCAGCGCGCTCTTCGTCATCGCTTTCGTCG
TTCTCGGTTTCATGGTCAACACTCACTTCATCTACACGCCTTGGCAGCCC
ATCGTGGCAGACTTTCTGTTGCCGCTGGCTGGATTCATCATCGGTTTTGG
GCTGGCAAAGATGTTATGCCTCGACAACACCAGAGCCAAAACTGTCTCCA
TAGAAACCGGAGTGCAGAACGGAAGGCTGGCTTCCGCCATGATCAGGCTC
GCGTTCCCACAGCCGGAAGCAGACCTCTCGTTCTGTGTGTCTTTTCTGAA
CGGCATGTTCCAGGTTGGCATTGGCCTGCTAGCAGTTGCAGTGTATAATA
TATACAAGTGTAAAAATCCCACCACTGAAGAAGTGAAGATGACTAATCTT
GAGGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTGCAAATCTTGA
GGGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTACTAATCTTGAGG
GACTAGAGAATCCCATTGTGATATCTGATGTCAAAGAGTAAATGCTGAAA
GAGGGCTCGTTCAACCTAACCGCTGTGTCCAACAACAGTTTATCGGTACC
TGTACAATCCGGGCATATAGGTATCACATCCCTGGACTTCATTGTGAACC
AAGGAACAAATGCTACAGCTCTCGATTACACTGTCAAGGTGTTGAGGGCC
CGACCGCCAGTGGATGAAGCTCTGAACTACATTCTCATCCCGTTCCTGGT
CGTCAACGCTTTCGCGATGGGCACTGCGGTGGAGTGGCCTCTTGTGGTGA
AGGTGTTGAAGAGACCGTACGGTGTAGCTATAGGAGCGCTGTCTCAGTTC
GTCTTCATGCCACTGCTGGCCTTCATCCTTTCCAAGGCGTTCTCCCTTGC
GGACGTCTATGCTATAGGTCTCCTGATGGTCGGATCCTCCCCGGGAGGCG
GACTGAGTAACATCCTGACGTTCTTCCTGGACGCTGACCTTCCCCTCAGC
ATGACCATGACCTTCGTGTCAACCGTCCTGGCTCTGGGGATGATGCCGCT
CTCACTCTTCATCTATGGACGGGCGTTCAACTTTGATAGAATCAACGTGC
CCTACTCGACCATCGTCACGTCCCTCGTCCCCGTCACCATCGCCAAGGTG
CTGGGGATCCTCCTGCGGCACAAGAAACCACGCATCGCCGACAAGGTCAT
GAAGGCGATCCGGCCCTTCAGCGCGCTCTTCGTCATCGCTTTCGTCGTTC
TCGGTTTCATGGTCAACACTCACTTCATCTACACGCCTTGGCAGCCCATC
GTGGCAGACTTTCTGTTGCCGCTGGCTGGATTCATCATCGGTTTTGGGCT
GGCAAAGATGTTATGCCTCGACAACACCAGAGCCAAAACTGTCTCCATAG
AAACCGGAGTGCAGAACGGAAGGCTGGCTTCCGCCATGATCAGGCTCGCG
TTCCCACAGCCGGAAGCAGACCTCTCGTTCTGTGTGTCTTTTCTGAACGG
CATGTTCCAGGTTGGCATTGGCCTGCTAGCAGTTGCAGTGTATAATATAT
ACAAGTGTAAAAATCCCACCACTGAAGAAGTGAAGATGACTAATCTTGAG
GGACTAGAGAATCCGACCACTGAAGAAGAAAAGATTGCAAATCTTGAGGG
ACTAGAGAATCCGACCACTGAAGAAGAAAAGATTACTAATCTTGAGGGAC
TAGAGAATCCCATTGTGATATCTGATGTCAAAGAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:1133170..1137818 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95113_evm1 |
| Biotype | protein_coding |
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