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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95107_evm0 >transcript:BL95107_evm0-protein ID=transcript:BL95107_evm0-protein|Name=transcript:BL95107_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=394bp
MAAGRNKIRCIFFSEFHPVAGPKITFQVPEDYISQKLFDSVHIYIITKPQ
LQNKLITLDALGHRIIGCPVCIENAKYSRNALLFNLCFVFGSDADSQRYE
PVVKKLAGYLTTLEMETGFLSDEQSKLKLPEVMKELLTQLNTCGTCSVPI
NESNTLHLKVVPTSEEPQVVLEHHVPVFLQDKESFVSSQWDLTTQQILPY
IDGFNHVMRIAQEADVDINLVRICVQNMLYYGVITLLPIFQYSNVYVCTP
DVHSLVQDARLQAECLAYVSKHPGSTPPRFRAVXPPPRFRDVFVLYCGLG
AGTTVRDLCTRHAAQLQNVDERRLIQFGLTKGLIRRVKKYPVKLTASDFG
SARPWTRWMTGLHSYDEICCKTGMTYQELEDKVESDPHIVVCWK Run BLAST on NCBI mRNA from alignment at Sc0000005:7770871..7773391+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95107_evm0 ID=transcript:BL95107_evm0|Name=transcript:BL95107_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2521bp|location=Sequence derived from alignment at Sc0000005:7770871..7773391+ (Branchiostoma lanceolatum)
ATGGCGGCCGGGCGGAACAAAATCCGCTGCATTTTCTTCAGCGAGTTCCA
CCCCGTGGCGGGGCCCAAGATCACGTTCCAGGTTCCCGAGGACTACATCT
CCCAGAAACTGTTCGACTCTGTGCACATCTACATCATCACCAAGCCGCAA
CTGCAAAACAAGCTGATTACGCTGGACGCGCTCGGACACAGGATCATCGG
CTGCCCGGTGTGCATAGAGAACGCCAAGTACTCCCGGAACGCGCTGCTGT
TCAACCTGTGCTTCGTGTTCGGGTCTGACGCCGACAGCCAGCGGTACGAG
CCCGTGGTGAAGAAGCTGGCGGGCTACCTCACCACGCTGGAGATGGAGAC
CGGGTTCCTGTCGGACGAGCAGAGCAAGCTGAAACTACCGGAAGTCATGA
AGGTGGGAGGGGCGGGGGCGTGGCAGGGCGATTAGAACAGAAGCTAAATG
ACGTGATGGAAAGTGCAGTGACTTCTTACGCTCAAAAACAAACTACAAAA
TAGTTAATGTGTGAATGCGTGCTGCTTTGTACAACATGCATGGATGAGAA
TGAGTGGTCTATACAAGCTTAAAAGGTCTCCAGAGAAGTATTTTTGGTCT
GTAAAATAACAAGGCTACAGGACTGATGGATGGAAGGACAGAGAAACATA
AACTACAAATGATAATTCTTTTTTACCCATTCCCTGTCCCTTTAAGAGTT
GTTAACCCAGCTGAACACTTGAACAAAGTCAGGACAGAAAGAAACAAGGA
ATAGGGAATCATAAGAAATCTTCCTTTTCCCTTCCAGGAGCTGTTGACGC
AGCTGAACACCTGCGGCACCTGCAGCGTTCCCATCAACGAGTCCAACACG
CTCCACCTGAAGGTCGTGCCGACCTCCGAGGAGCCTCAAGTCGTGCTGGA
GCACCATGTGCCTGTGTTCCTTCAAGACAAGGTAGAGTCTTCAACCTTCT
CTGAGGAAGTCTTCTGGCAACAAAGTTGTATTCGTTACGGGGTTAGGCAG
CAGGGAGAAGGTTAAGCACCATGACCATGTACCTGTGTTCCTCCAAGACA
AGGTAACTGTAACCCGTGTTCACTGCATAGTTTGCTGAAGACCTCTTTCA
TATCACTGAATACTTTGTTGTCACTAGGAAGTCACATTTCAAATTCTTCC
CCCCCCAGGAGTCGTTTGTGTCGAGCCAGTGGGACCTGACGACGCAGCAG
ATCCCACATACATACATGTCTGCTGTTCTGCTGCAGATCCCTACATGTGT
AATGTTACAGACATGTCTGATCCTGTATATCCCCCCCCCCAGGAGTCGTT
TGTATCGAGCCAGTGGGACCTGACCACGCAGCAGATCCTGCCGTACATTG
ACGGGTTTAACCACGTGATGCGGATCGCGCAGGAGGCGGACGTGGACATC
AACCTGGTGCGGATCTGTGTGCAGAACATGCTGTACTACGGCGTCATCAC
GCTGCTGCCCATCTTCCAGTACTCCAACGTGTACGTCTGCACACCCGACG
TCCACTCCCTGGTGCAGGACGCCCGACTGCAGGCGGAGTGTCTCGCCTAC
GTCTCAAAACACCCCGGCAGCACCCCGCCCAGGTAACGTCATTCATCTTT
ACACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACACACTC
ACTCACTCACTCACACACTCACTCACTCACTCACTCCCTCGCTCTCTCAC
ACACGTCTCAAAACACCCCGGCAGCACCCCGCCCAGGTGACGTTATTCAT
CTTTACACTCACTCACTCACTCACTCACTCACTCACTCACTCTCACTCAC
TCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCTCTC
ACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACACAT
GTCTCCAAACATCCCGGCAGCACCCCGCCCAGATGACGTTATTCAGCTAT
CTTTTCTAGATTAGGATTATTCTGAACGGAGGCTTTACCACTTTACATGC
CTAACCAAAAGTAGGTACTCATTTCCCCTGTCAGTAGAGTAAGTAAATAG
GTGTAACGTGCCTTTCACAAGGGCATGACAATGGGGGCTGCTAGCGATTC
GAACCCAGAACCTTCAGATTATAAGTCAAGAGCTCTAACCAAAAGACCAC
CTTGTCGCCCCCCCCCCCCCAGGTTCCGGGCCGTGTTNCCCCCCCCCAGG
TTCCGGGACGTGTTCGTGCTGTACTGCGGTCTGGGCGCGGGAACCACGGT
ACGGGACCTGTGCACGCGGCACGCGGCGCAGCTGCAGAACGTGGACGAGC
GCCGCCTGATCCAGTTCGGCCTGACGAAGGGGCTGATCCGCCGCGTGAAG
AAGTACCCCGTCAAGCTGACGGCCTCGGACTTCGGCAGCGCCAGGCCCTG
GACCCGCTGGATGACGGGACTCCACAGCTACGACGAGATCTGCTGTAAAA
CCGGCATGACCTACCAGGAGCTGGAGGACAAGGTCGAGAGCGACCCGCAC
ATCGTCGTCTGCTGGAAATAA Coding sequence (CDS) from alignment at Sc0000005:7770871..7773391+ >transcript:BL95107_evm0 ID=transcript:BL95107_evm0|Name=transcript:BL95107_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4740bp|location=Sequence derived from alignment at Sc0000005:7770871..7773391+ (Branchiostoma lanceolatum)
ATGGCGGCCGGGCGGAACAAAATCCGCTGCATTTTCTTCAGCGAGTTCCA
CCCCGTGGCGGGGCCCAAGATCACGTTCCAGGTTCCCGAGGACTACATCT
CCCAGAAACTGTTCGACTCTGTGCACATCTACATCATCACCAAGCCGCAA
CTGCAAAACAAGCTGATTACGCTGGACGCGCTCGGACACAGGATCATCGG
CTGCCCGGTGTGCATAGAGAACGCCAAGTACTCCCGGAACGCGCTGCTGT
TCAACCTGTGCTTCGTGTTCGGGTCTGACGCCGACAGCCAGCGGTACGAG
CCCGTGGTGAAGAAGCTGGCGGGCTACCTCACCACGCTGGAGATGGAGAC
CGGGTTCCTGTCGGACGAGCAGAGCAAGCTGAAACTACCGGAAGTCATGA
AGGAGCTGTTGACGCAGCTGAACACCTGCGGCACCTGCAGCGTTCCCATC
AACGAGTCCAACACGCTCCACCTGAAGGTCGTGCCGACCTCCGAGGAGCC
TCAAGTCGTGCTGGAGCACCATGTGCCTGTGTTCCTTCAAGACAAGGAGT
CGTTTGTATCGAGCCAGTGGGACCTGACCACGCAGCAGATCCTGCCGTAC
ATTGACGGGTTTAACCACGTGATGCGGATCGCGCAGGAGGCGGACGTGGA
CATCAACCTGGTGCGGATCTGTGTGCAGAACATGCTGTACTACGGCGTCA
TCACGCTGCTGCCCATCTTCCAGTACTCCAACGTGTACGTCTGCACACCC
GACGTCCACTCCCTGGTGCAGGACGCCCGACTGCAGGCGGAGTGTCTCGC
CTACGTCTCAAAACACCCCGGCAGCACCCCGCCCAGGTTCCGGGCCGTGT
TNCCCCCCCCCAGGTTCCGGGACGTGTTCGTGCTGTACTGCGGTCTGGGC
GCGGGAACCACGGTACGGGACCTGTGCACGCGGCACGCGGCGCAGCTGCA
GAACGTGGACGAGCGCCGCCTGATCCAGTTCGGCCTGACGAAGGGGCTGA
TCCGCCGCGTGAAGAAGTACCCCGTCAAGCTGACGGCCTCGGACTTCGGC
AGCGCCAGGCCCTGGACCCGCTGGATGACGGGACTCCACAGCTACGACGA
GATCTGCTGTAAAACCGGCATGACCTACCAGGAGCTGGAGGACAAGGTCG
AGAGCGACCCGCACATCGTCGTCTGCTGGAAATAAATGGCGGCCGGGCGG
AACAAAATCCGCTGCATTTTCTTCAGCGAGTTCCACCCCGTGGCGGGGCC
CAAGATCACGTTCCAGGTTCCCGAGGACTACATCTCCCAGAAACTGTTCG
ACTCTGTGCACATCTACATCATCACCAAGCCGCAACTGCAAAACAAGCTG
ATTACGCTGGACGCGCTCGGACACAGGATCATCGGCTGCCCGGTGTGCAT
AGAGAACGCCAAGTACTCCCGGAACGCGCTGCTGTTCAACCTGTGCTTCG
TGTTCGGGTCTGACGCCGACAGCCAGCGGTACGAGCCCGTGGTGAAGAAG
CTGGCGGGCTACCTCACCACGCTGGAGATGGAGACCGGGTTCCTGTCGGA
CGAGCAGAGCAAGCTGAAACTACCGGAAGTCATGAAGGAGCTGTTGACGC
AGCTGAACACCTGCGGCACCTGCAGCGTTCCCATCAACGAGTCCAACACG
CTCCACCTGAAGGTCGTGCCGACCTCCGAGGAGCCTCAAGTCGTGCTGGA
GCACCATGTGCCTGTGTTCCTTCAAGACAAGGAGTCGTTTGTATCGAGCC
AGTGGGACCTGACCACGCAGCAGATCCTGCCGTACATTGACGGGTTTAAC
CACGTGATGCGGATCGCGCAGGAGGCGGACGTGGACATCAACCTGGTGCG
GATCTGTGTGCAGAACATGCTGTACTACGGCGTCATCACGCTGCTGCCCA
TCTTCCAGTACTCCAACGTGTACGTCTGCACACCCGACGTCCACTCCCTG
GTGCAGGACGCCCGACTGCAGGCGGAGTGTCTCGCCTACGTCTCAAAACA
CCCCGGCAGCACCCCGCCCAGGTTCCGGGCCGTGTTNCCCCCCCCCAGGT
TCCGGGACGTGTTCGTGCTGTACTGCGGTCTGGGCGCGGGAACCACGGTA
CGGGACCTGTGCACGCGGCACGCGGCGCAGCTGCAGAACGTGGACGAGCG
CCGCCTGATCCAGTTCGGCCTGACGAAGGGGCTGATCCGCCGCGTGAAGA
AGTACCCCGTCAAGCTGACGGCCTCGGACTTCGGCAGCGCCAGGCCCTGG
ACCCGCTGGATGACGGGACTCCACAGCTACGACGAGATCTGCTGTAAAAC
CGGCATGACCTACCAGGAGCTGGAGGACAAGGTCGAGAGCGACCCGCACA
TCGTCGTCTGCTGGAAATAAATGGCGGCCGGGCGGAACAAAATCCGCTGC
ATTTTCTTCAGCGAGTTCCACCCCGTGGCGGGGCCCAAGATCACGTTCCA
GGTTCCCGAGGACTACATCTCCCAGAAACTGTTCGACTCTGTGCACATCT
ACATCATCACCAAGCCGCAACTGCAAAACAAGCTGATTACGCTGGACGCG
CTCGGACACAGGATCATCGGCTGCCCGGTGTGCATAGAGAACGCCAAGTA
CTCCCGGAACGCGCTGCTGTTCAACCTGTGCTTCGTGTTCGGGTCTGACG
CCGACAGCCAGCGGTACGAGCCCGTGGTGAAGAAGCTGGCGGGCTACCTC
ACCACGCTGGAGATGGAGACCGGGTTCCTGTCGGACGAGCAGAGCAAGCT
GAAACTACCGGAAGTCATGAAGGAGCTGTTGACGCAGCTGAACACCTGCG
GCACCTGCAGCGTTCCCATCAACGAGTCCAACACGCTCCACCTGAAGGTC
GTGCCGACCTCCGAGGAGCCTCAAGTCGTGCTGGAGCACCATGTGCCTGT
GTTCCTTCAAGACAAGGAGTCGTTTGTATCGAGCCAGTGGGACCTGACCA
CGCAGCAGATCCTGCCGTACATTGACGGGTTTAACCACGTGATGCGGATC
GCGCAGGAGGCGGACGTGGACATCAACCTGGTGCGGATCTGTGTGCAGAA
CATGCTGTACTACGGCGTCATCACGCTGCTGCCCATCTTCCAGTACTCCA
ACGTGTACGTCTGCACACCCGACGTCCACTCCCTGGTGCAGGACGCCCGA
CTGCAGGCGGAGTGTCTCGCCTACGTCTCAAAACACCCCGGCAGCACCCC
GCCCAGGTTCCGGGCCGTGTTNCCCCCCCCCAGGTTCCGGGACGTGTTCG
TGCTGTACTGCGGTCTGGGCGCGGGAACCACGGTACGGGACCTGTGCACG
CGGCACGCGGCGCAGCTGCAGAACGTGGACGAGCGCCGCCTGATCCAGTT
CGGCCTGACGAAGGGGCTGATCCGCCGCGTGAAGAAGTACCCCGTCAAGC
TGACGGCCTCGGACTTCGGCAGCGCCAGGCCCTGGACCCGCTGGATGACG
GGACTCCACAGCTACGACGAGATCTGCTGTAAAACCGGCATGACCTACCA
GGAGCTGGAGGACAAGGTCGAGAGCGACCCGCACATCGTCGTCTGCTGGA
AATAAATGGCGGCCGGGCGGAACAAAATCCGCTGCATTTTCTTCAGCGAG
TTCCACCCCGTGGCGGGGCCCAAGATCACGTTCCAGGTTCCCGAGGACTA
CATCTCCCAGAAACTGTTCGACTCTGTGCACATCTACATCATCACCAAGC
CGCAACTGCAAAACAAGCTGATTACGCTGGACGCGCTCGGACACAGGATC
ATCGGCTGCCCGGTGTGCATAGAGAACGCCAAGTACTCCCGGAACGCGCT
GCTGTTCAACCTGTGCTTCGTGTTCGGGTCTGACGCCGACAGCCAGCGGT
ACGAGCCCGTGGTGAAGAAGCTGGCGGGCTACCTCACCACGCTGGAGATG
GAGACCGGGTTCCTGTCGGACGAGCAGAGCAAGCTGAAACTACCGGAAGT
CATGAAGGAGCTGTTGACGCAGCTGAACACCTGCGGCACCTGCAGCGTTC
CCATCAACGAGTCCAACACGCTCCACCTGAAGGTCGTGCCGACCTCCGAG
GAGCCTCAAGTCGTGCTGGAGCACCATGTGCCTGTGTTCCTTCAAGACAA
GGAGTCGTTTGTATCGAGCCAGTGGGACCTGACCACGCAGCAGATCCTGC
CGTACATTGACGGGTTTAACCACGTGATGCGGATCGCGCAGGAGGCGGAC
GTGGACATCAACCTGGTGCGGATCTGTGTGCAGAACATGCTGTACTACGG
CGTCATCACGCTGCTGCCCATCTTCCAGTACTCCAACGTGTACGTCTGCA
CACCCGACGTCCACTCCCTGGTGCAGGACGCCCGACTGCAGGCGGAGTGT
CTCGCCTACGTCTCAAAACACCCCGGCAGCACCCCGCCCAGGTTCCGGGC
CGTGTTNCCCCCCCCCAGGTTCCGGGACGTGTTCGTGCTGTACTGCGGTC
TGGGCGCGGGAACCACGGTACGGGACCTGTGCACGCGGCACGCGGCGCAG
CTGCAGAACGTGGACGAGCGCCGCCTGATCCAGTTCGGCCTGACGAAGGG
GCTGATCCGCCGCGTGAAGAAGTACCCCGTCAAGCTGACGGCCTCGGACT
TCGGCAGCGCCAGGCCCTGGACCCGCTGGATGACGGGACTCCACAGCTAC
GACGAGATCTGCTGTAAAACCGGCATGACCTACCAGGAGCTGGAGGACAA
GGTCGAGAGCGACCCGCACATCGTCGTCTGCTGGAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7770871..7773391 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95107_evm0 |
| Biotype | protein_coding |
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