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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95004_evm0 >transcript:BL95004_evm0-protein ID=transcript:BL95004_evm0-protein|Name=transcript:BL95004_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=298bp
MTTPCPAEKSERPESHYEKWEISRDNIILGKTIGQGHFGDVREGLWKEEV
KVAVKSAKKGEMPDDLFLQEANTMTKLHHANIVQLLGVCTKEDPIYIITE
FVCNGSLEGYLKGEQGKRLSLVHQIDMATQVAAGMEYLESNSVIHRDLRA
ANVLVGKRNLCKVADFGMARLRVESIYVSKRNVMPFRWTAIEAIDQKEFT
SQSDVWSFGILMTEILTKGRMPYADIKDNDGVIAQVRHGYRMPPEDDWPE
PLYEIMQRCWLKEPNERPTFIDLNRILTNYFSNDXTSAMTKNTIDVVD Run BLAST on NCBI mRNA from alignment at Sc0000000:4261267..4264318- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95004_evm0 ID=transcript:BL95004_evm0|Name=transcript:BL95004_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3052bp|location=Sequence derived from alignment at Sc0000000:4261267..4264318- (Branchiostoma lanceolatum)
ATGACAACTCCATGTCCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTA
CGAAAAGTGGGAAATTTCACGAGACAACATCATACTTGGGAAGACTATTG
GGCAAGGCCATTTCGGAGACGTGCGTGAAGGTCGGTTTAATTTGTGTTAA
CCCCATGAGATATGCTTTTTGACAGACTGTATCATCTGTAATAGAAGCTA
ATAAGTTGGAATGTTGAGAAACAACTACATTATACGCATTATCAGTCTTG
AATAGATTTAAGGTTAACGACCAAACCATTCATACAATTAAAGTTGTAAT
TGGATTGGCAAGGGTATGAATGATTTTGTTGGTCACACAAAATATTCTGA
AATATTGTTGCGTCGTTGGATGGAGGTATCTATGCTTTTGTTGCTTACAG
ATTTGATTATACATTACGTATTGTAAAGGGACCCTTTCGACATTTCCATC
CCGTAGGACTTTGGAAGGAAGAAGTAAAGGTTGCAGTGAAGAGTGCCAAG
AAGGGAGAAATGCCTGACGACCTGTTTCTCCAGGAGGCTAACACTATGAC
AAAACTACATCACGCCAACATTGTCCAGGTACTTGCACTTAAAATACTAG
TAAAAACGATTTGAAACTAACTTATAGATGATAGATATACTTTAAAACTC
TTTTCATACGTATAATTGTGAGCAACAAGGAAAACAATGAAGAAATTGCT
CATCATATCAGGATTCCATGCTCTGCTACTTCTCCTAGATATTAGCATGA
AAGTTCATCTGTCTTGGTAAACTTTACATGACAGACACATAACTGAAAAA
AATTGGGTAAATACACATTTCTGCTGGTCATGCAAAGTTTAGTCCTCATT
TGCAATCGAGTTAAGGTAGTTATATTGGGATCTGATAAAACCCATGATGT
CACGTATGCTTTTCTGTGACTTTGAGCCTAACATAAATGGCAATACTCTA
AAAGTCAAATAGCCCAGTATTTTTTGTAAGGTCCATTAAGTTTTTTTTAC
ATGACATGTTAAAGCTTATGATGGATAGAATTAGATTGGATTTGTTCACC
CGAATATATATTTATGGGCTCCGTGCATATGGTCATCATTTGAAAACCAA
TTCGACTAAACATTGTAGAAACATGTCAATGTGCACTTATTATGTACACA
AATTCTAATACTCGTTCATTTGCTAATATGAGAGTGGAATGGCATCTAAG
TTACATTGATGCGGTTTTGTTTCTTTTATGTATGCATGGTAGTAAAAAGT
CTATAATCAATGCAGGATATGCTCTTATATGACTTAGGTACTCTTATACA
TTAAAACATTCAAAATGTTCCAAAGGCACGTTGCATATTGTTCCTGCATT
GTGATATTAAAAGTATTGAGCCAAAAGTTGTTCTGATGACGTGTAACTTA
GTAAGGTACACACATTCACACAATATGAAAAATTGCAGGATAGTCAGATG
TTGTTTTCGCGATTCGGCAGCAATTATTTTTGCACAACAATTTCCGTAGT
CTATTTTTAACAAACTATCATATTTCCATTAATCATGCAAGGATCTCCTG
AAAAGGCCTAACTAAACATGCTGGCAAACCGCTTTTCTATCTGAAGGAAA
AGAGAAAATGGTACTCGTTGGTGGAGACATATTGATACTACAGGCAAACA
TAATTCTCTTGGGGACATTTTGATGATTGTAATATATTTTCATAGAAAGG
GTATCTTATCAATTCTAAACTTTGCAATATTGGAGAGTGTATATCACAAT
TTGTTCTCTCACACATTCAGCTTCTCGGCGTCTGTACAAAGGAGGACCCA
ATCTACATCATCACCGAGTTCGTGTGTAACGGCAGTCTAGAAGGTTATTT
GAAGGGAGAACAGGGGAAACGTCTGAGTCTGGTTCATCAGATTGACATGG
CTACCCAGGTAATTGTCTATTCAATTGAAATTTGGCAGTTAGCTGACTGG
TAAGATCCATATGGATACCAGCCGTCAGATCTTACGGACTTTCTTTGTAC
TGTCACGTCCCTGTGGACATTCTTAAACTTGGATTCAGCAGCGGGTTCTT
ATGCAAATTCAAAATAACACTAAATCAAGTACGTATACGCATTTCCACAT
GAAATACAGGTAGCGGCTGGTATGGAGTATTTAGAAAGCAACAGCGTTAT
TCACAGAGACTTGCGGGCAGCAAACGTCCTTGTGGGAAAACGAAATCTGT
GCAAGGTGGCGGACTTCGGGATGGCTAGGCTACGTGTAGAGAGCATCTAT
GTATCAAAAAGAAGTGAGTCGGAATATAACGTGCCTTGTGTTTCCATTTA
TAATTTAGTGTGTTTCTGTATTAAGGCAAGCCTTGTTCATGTTTCGTTGA
AAAGCTGATAATGCATTGTAACTTTAAGCTCACTGCCGATCACATCTGAA
AGCTTTAATCTTTTATAGATGTGATGCCGTTTCGCTGGACGGCGATTGAA
GCTATCGACCAAAAGGAGTTCACGTCACAGTCTGATGTCTGGTCCTTCGG
TATCCTGATGACAGAGATCCTCACTAAGGGGCGGATGCCGTATGCAGGTA
AGACTCTTAGATTTTTGTTCAAGGTTTTGAGTGTAATGCTTTATCACAGT
ACCCACCCAACATAAGGTACCGTATGTTCTTGCAAACAATAAAATTAAGC
CAAGGTCGTAAACCGGCCACCCCCGAGCGGGCTAATCTGTCTGGGCGGGC
GGGCACCACTCCCAGCGCCGTAGAGATACCGGGGAGCTCCCGATGGTATG
GTTTCCAGGCTAGAGGTACCATTGACCGAACTCATGTTTCTGTTTTTGTT
TTGACATTTTTGGGTTTCACATGCACAGATATTAAAGACAATGACGGCGT
GATAGCCCAGGTTCGCCATGGGTACCGCATGCCTCCGGAGGACGACTGGC
CCGAACCCCTGTATGAGATCATGCAGCGCTGCTGGCTCAAGGAACCAAAC
GAGCGACCAACGTTCATAGATCTCAATCGTATTTTGACGAACTACTTCAG
TAATGACAANACTTCAGCAATGACAAAGAATACTATTGATGTTGTGGACT
AG Coding sequence (CDS) from alignment at Sc0000000:4261267..4264318- >transcript:BL95004_evm0 ID=transcript:BL95004_evm0|Name=transcript:BL95004_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5382bp|location=Sequence derived from alignment at Sc0000000:4261267..4264318- (Branchiostoma lanceolatum)
ATGACAACTCCATGTCCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTA
CGAAAAGTGGGAAATTTCACGAGACAACATCATACTTGGGAAGACTATTG
GGCAAGGCCATTTCGGAGACGTGCGTGAAGGACTTTGGAAGGAAGAAGTA
AAGGTTGCAGTGAAGAGTGCCAAGAAGGGAGAAATGCCTGACGACCTGTT
TCTCCAGGAGGCTAACACTATGACAAAACTACATCACGCCAACATTGTCC
AGCTTCTCGGCGTCTGTACAAAGGAGGACCCAATCTACATCATCACCGAG
TTCGTGTGTAACGGCAGTCTAGAAGGTTATTTGAAGGGAGAACAGGGGAA
ACGTCTGAGTCTGGTTCATCAGATTGACATGGCTACCCAGGTAGCGGCTG
GTATGGAGTATTTAGAAAGCAACAGCGTTATTCACAGAGACTTGCGGGCA
GCAAACGTCCTTGTGGGAAAACGAAATCTGTGCAAGGTGGCGGACTTCGG
GATGGCTAGGCTACGTGTAGAGAGCATCTATGTATCAAAAAGAAATGTGA
TGCCGTTTCGCTGGACGGCGATTGAAGCTATCGACCAAAAGGAGTTCACG
TCACAGTCTGATGTCTGGTCCTTCGGTATCCTGATGACAGAGATCCTCAC
TAAGGGGCGGATGCCGTATGCAGATATTAAAGACAATGACGGCGTGATAG
CCCAGGTTCGCCATGGGTACCGCATGCCTCCGGAGGACGACTGGCCCGAA
CCCCTGTATGAGATCATGCAGCGCTGCTGGCTCAAGGAACCAAACGAGCG
ACCAACGTTCATAGATCTCAATCGTATTTTGACGAACTACTTCAGTAATG
ACAANACTTCAGCAATGACAAAGAATACTATTGATGTTGTGGACTAGATG
ACAACTCCATGTCCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTACGA
AAAGTGGGAAATTTCACGAGACAACATCATACTTGGGAAGACTATTGGGC
AAGGCCATTTCGGAGACGTGCGTGAAGGACTTTGGAAGGAAGAAGTAAAG
GTTGCAGTGAAGAGTGCCAAGAAGGGAGAAATGCCTGACGACCTGTTTCT
CCAGGAGGCTAACACTATGACAAAACTACATCACGCCAACATTGTCCAGC
TTCTCGGCGTCTGTACAAAGGAGGACCCAATCTACATCATCACCGAGTTC
GTGTGTAACGGCAGTCTAGAAGGTTATTTGAAGGGAGAACAGGGGAAACG
TCTGAGTCTGGTTCATCAGATTGACATGGCTACCCAGGTAGCGGCTGGTA
TGGAGTATTTAGAAAGCAACAGCGTTATTCACAGAGACTTGCGGGCAGCA
AACGTCCTTGTGGGAAAACGAAATCTGTGCAAGGTGGCGGACTTCGGGAT
GGCTAGGCTACGTGTAGAGAGCATCTATGTATCAAAAAGAAATGTGATGC
CGTTTCGCTGGACGGCGATTGAAGCTATCGACCAAAAGGAGTTCACGTCA
CAGTCTGATGTCTGGTCCTTCGGTATCCTGATGACAGAGATCCTCACTAA
GGGGCGGATGCCGTATGCAGATATTAAAGACAATGACGGCGTGATAGCCC
AGGTTCGCCATGGGTACCGCATGCCTCCGGAGGACGACTGGCCCGAACCC
CTGTATGAGATCATGCAGCGCTGCTGGCTCAAGGAACCAAACGAGCGACC
AACGTTCATAGATCTCAATCGTATTTTGACGAACTACTTCAGTAATGACA
ANACTTCAGCAATGACAAAGAATACTATTGATGTTGTGGACTAGATGACA
ACTCCATGTCCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTACGAAAA
GTGGGAAATTTCACGAGACAACATCATACTTGGGAAGACTATTGGGCAAG
GCCATTTCGGAGACGTGCGTGAAGGACTTTGGAAGGAAGAAGTAAAGGTT
GCAGTGAAGAGTGCCAAGAAGGGAGAAATGCCTGACGACCTGTTTCTCCA
GGAGGCTAACACTATGACAAAACTACATCACGCCAACATTGTCCAGCTTC
TCGGCGTCTGTACAAAGGAGGACCCAATCTACATCATCACCGAGTTCGTG
TGTAACGGCAGTCTAGAAGGTTATTTGAAGGGAGAACAGGGGAAACGTCT
GAGTCTGGTTCATCAGATTGACATGGCTACCCAGGTAGCGGCTGGTATGG
AGTATTTAGAAAGCAACAGCGTTATTCACAGAGACTTGCGGGCAGCAAAC
GTCCTTGTGGGAAAACGAAATCTGTGCAAGGTGGCGGACTTCGGGATGGC
TAGGCTACGTGTAGAGAGCATCTATGTATCAAAAAGAAATGTGATGCCGT
TTCGCTGGACGGCGATTGAAGCTATCGACCAAAAGGAGTTCACGTCACAG
TCTGATGTCTGGTCCTTCGGTATCCTGATGACAGAGATCCTCACTAAGGG
GCGGATGCCGTATGCAGATATTAAAGACAATGACGGCGTGATAGCCCAGG
TTCGCCATGGGTACCGCATGCCTCCGGAGGACGACTGGCCCGAACCCCTG
TATGAGATCATGCAGCGCTGCTGGCTCAAGGAACCAAACGAGCGACCAAC
GTTCATAGATCTCAATCGTATTTTGACGAACTACTTCAGTAATGACAANA
CTTCAGCAATGACAAAGAATACTATTGATGTTGTGGACTAGATGACAACT
CCATGTCCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTACGAAAAGTG
GGAAATTTCACGAGACAACATCATACTTGGGAAGACTATTGGGCAAGGCC
ATTTCGGAGACGTGCGTGAAGGACTTTGGAAGGAAGAAGTAAAGGTTGCA
GTGAAGAGTGCCAAGAAGGGAGAAATGCCTGACGACCTGTTTCTCCAGGA
GGCTAACACTATGACAAAACTACATCACGCCAACATTGTCCAGCTTCTCG
GCGTCTGTACAAAGGAGGACCCAATCTACATCATCACCGAGTTCGTGTGT
AACGGCAGTCTAGAAGGTTATTTGAAGGGAGAACAGGGGAAACGTCTGAG
TCTGGTTCATCAGATTGACATGGCTACCCAGGTAGCGGCTGGTATGGAGT
ATTTAGAAAGCAACAGCGTTATTCACAGAGACTTGCGGGCAGCAAACGTC
CTTGTGGGAAAACGAAATCTGTGCAAGGTGGCGGACTTCGGGATGGCTAG
GCTACGTGTAGAGAGCATCTATGTATCAAAAAGAAATGTGATGCCGTTTC
GCTGGACGGCGATTGAAGCTATCGACCAAAAGGAGTTCACGTCACAGTCT
GATGTCTGGTCCTTCGGTATCCTGATGACAGAGATCCTCACTAAGGGGCG
GATGCCGTATGCAGATATTAAAGACAATGACGGCGTGATAGCCCAGGTTC
GCCATGGGTACCGCATGCCTCCGGAGGACGACTGGCCCGAACCCCTGTAT
GAGATCATGCAGCGCTGCTGGCTCAAGGAACCAAACGAGCGACCAACGTT
CATAGATCTCAATCGTATTTTGACGAACTACTTCAGTAATGACAANACTT
CAGCAATGACAAAGAATACTATTGATGTTGTGGACTAGATGACAACTCCA
TGTCCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTACGAAAAGTGGGA
AATTTCACGAGACAACATCATACTTGGGAAGACTATTGGGCAAGGCCATT
TCGGAGACGTGCGTGAAGGACTTTGGAAGGAAGAAGTAAAGGTTGCAGTG
AAGAGTGCCAAGAAGGGAGAAATGCCTGACGACCTGTTTCTCCAGGAGGC
TAACACTATGACAAAACTACATCACGCCAACATTGTCCAGCTTCTCGGCG
TCTGTACAAAGGAGGACCCAATCTACATCATCACCGAGTTCGTGTGTAAC
GGCAGTCTAGAAGGTTATTTGAAGGGAGAACAGGGGAAACGTCTGAGTCT
GGTTCATCAGATTGACATGGCTACCCAGGTAGCGGCTGGTATGGAGTATT
TAGAAAGCAACAGCGTTATTCACAGAGACTTGCGGGCAGCAAACGTCCTT
GTGGGAAAACGAAATCTGTGCAAGGTGGCGGACTTCGGGATGGCTAGGCT
ACGTGTAGAGAGCATCTATGTATCAAAAAGAAATGTGATGCCGTTTCGCT
GGACGGCGATTGAAGCTATCGACCAAAAGGAGTTCACGTCACAGTCTGAT
GTCTGGTCCTTCGGTATCCTGATGACAGAGATCCTCACTAAGGGGCGGAT
GCCGTATGCAGATATTAAAGACAATGACGGCGTGATAGCCCAGGTTCGCC
ATGGGTACCGCATGCCTCCGGAGGACGACTGGCCCGAACCCCTGTATGAG
ATCATGCAGCGCTGCTGGCTCAAGGAACCAAACGAGCGACCAACGTTCAT
AGATCTCAATCGTATTTTGACGAACTACTTCAGTAATGACAANACTTCAG
CAATGACAAAGAATACTATTGATGTTGTGGACTAGATGACAACTCCATGT
CCGGCAGAGAAGTCCGAGCGTCCAGAGTCTCATTACGAAAAGTGGGAAAT
TTCACGAGACAACATCATACTTGGGAAGACTATTGGGCAAGGCCATTTCG
GAGACGTGCGTGAAGGACTTTGGAAGGAAGAAGTAAAGGTTGCAGTGAAG
AGTGCCAAGAAGGGAGAAATGCCTGACGACCTGTTTCTCCAGGAGGCTAA
CACTATGACAAAACTACATCACGCCAACATTGTCCAGCTTCTCGGCGTCT
GTACAAAGGAGGACCCAATCTACATCATCACCGAGTTCGTGTGTAACGGC
AGTCTAGAAGGTTATTTGAAGGGAGAACAGGGGAAACGTCTGAGTCTGGT
TCATCAGATTGACATGGCTACCCAGGTAGCGGCTGGTATGGAGTATTTAG
AAAGCAACAGCGTTATTCACAGAGACTTGCGGGCAGCAAACGTCCTTGTG
GGAAAACGAAATCTGTGCAAGGTGGCGGACTTCGGGATGGCTAGGCTACG
TGTAGAGAGCATCTATGTATCAAAAAGAAATGTGATGCCGTTTCGCTGGA
CGGCGATTGAAGCTATCGACCAAAAGGAGTTCACGTCACAGTCTGATGTC
TGGTCCTTCGGTATCCTGATGACAGAGATCCTCACTAAGGGGCGGATGCC
GTATGCAGATATTAAAGACAATGACGGCGTGATAGCCCAGGTTCGCCATG
GGTACCGCATGCCTCCGGAGGACGACTGGCCCGAACCCCTGTATGAGATC
ATGCAGCGCTGCTGGCTCAAGGAACCAAACGAGCGACCAACGTTCATAGA
TCTCAATCGTATTTTGACGAACTACTTCAGTAATGACAANACTTCAGCAA
TGACAAAGAATACTATTGATGTTGTGGACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4261267..4264318 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95004_evm0 |
| Biotype | protein_coding |
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