transcript:BL91304_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL91304_cuf0
Unique Nametranscript:BL91304_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL91304_cuf0

>transcript:BL91304_cuf0-protein ID=transcript:BL91304_cuf0-protein|Name=transcript:BL91304_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=108bp
MGPNALLQDDNARPHRAGIIADHLQHAGVERMEWPSKSPDLNPIEHLWDQ
LGRAVRARVTERTTLADLGRLLVEEWDAIPQHRIARLVTSMRRRCRAVVT
ARGWITRY
Run BLAST on NCBI

mRNA from alignment at Sc0000056:192604..193759-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL91304_cuf0 ID=transcript:BL91304_cuf0|Name=transcript:BL91304_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1156bp|location=Sequence derived from alignment at Sc0000056:192604..193759- (Branchiostoma lanceolatum)
ATATAAACTACGCACAAAAAGTTCGGAAACTTAACTTTGGTTGATTATAT
CTCCGTTGTTTTTTTTACCGATTTTGATGAATTATATATCATTATAAAGC
TTGTGTGATTCCCTGTTCTATGATACCAAACTTATTGTGATTGAAACCCC
ACGGAACAAGTACCAGGACTAATAACGTGAGTGGGTCACGGAGAAAAAGT
GCCCAAAATTCCCTGTTGGTGTCATACGCGCGCTGTGACATCCTATCGGT
ATGGGCGCGGATGATGATTCAATACATTGTTTCCTCAGGTTCTAAGGTTA
TTTTTAGAACACAGACCATCCAAGGTTATTTCTAGCACACAGAACATCCA
AGGTTATTTTTAGCACATCGAAGATCCAATTGTTTACACCACATAAACAC
CTGCGTCCTGCAACGGTATCGTCATCCACAGGTGTTATTTTTTGTTATTG
TTTCACAACAAACATTGGGGTATGGGGAGGCATAACCTCCAGGGGAAAGA
CAAGACTTGTACCAGGAACCCTCAATGCAGAAAGATATCGTGACACAATA
CTTGATCCGGTGGCCATCCCTTTCCTCCATAACATGGGGCCGAATGCCTT
GCTGCAAGATGATAACGCCCGCCCACACCGGGCAGGGATCATCGCCGACC
ATCTCCAGCATGCAGGTGTAGAGAGGATGGAGTGGCCCTCTAAGAGCCCG
GACCTGAACCCCATCGAACATCTATGGGATCAGCTTGGGCGAGCTGTCCG
TGCAAGAGTGACCGAGAGAACAACGCTGGCTGACCTAGGACGACTGCTGG
TGGAGGAATGGGACGCTATCCCACAGCATCGCATTGCGCGACTGGTGACG
AGTATGAGGAGGAGGTGCCGTGCTGTAGTGACAGCGCGTGGCTGGATCAC
CCGTTACTAAGACTCCTTGCTAACCCGTTACTAAGACACAGATTGTTGGT
TTTGATAAAGAATAAACTTAGCTTTCATGAATATGTCTTGTTTATTCTTG
TTGATTTTTCACAATACCCTCGTACAGAAGTCAATATCAACAGAAGAATA
TGTACGGAATAGCATGTTTGACTATAGTAAGGTAATCTGGGCACTTTATT
TCTTCGACCCACTCACTTTAGCAGGCCTGATGCTCGTTTCATGAACTTGC
AATCAC

Coding sequence (CDS) from alignment at Sc0000056:192604..193759-

>transcript:BL91304_cuf0 ID=transcript:BL91304_cuf0|Name=transcript:BL91304_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=327bp|location=Sequence derived from alignment at Sc0000056:192604..193759- (Branchiostoma lanceolatum)
ATGGGGCCGAATGCCTTGCTGCAAGATGATAACGCCCGCCCACACCGGGC
AGGGATCATCGCCGACCATCTCCAGCATGCAGGTGTAGAGAGGATGGAGT
GGCCCTCTAAGAGCCCGGACCTGAACCCCATCGAACATCTATGGGATCAG
CTTGGGCGAGCTGTCCGTGCAAGAGTGACCGAGAGAACAACGCTGGCTGA
CCTAGGACGACTGCTGGTGGAGGAATGGGACGCTATCCCACAGCATCGCA
TTGCGCGACTGGTGACGAGTATGAGGAGGAGGTGCCGTGCTGTAGTGACA
GCGCGTGGCTGGATCACCCGTTACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL91304gene:BL91304Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL91304_cuf0-E1BL91304_cuf0-E1-1564476830-236923Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL91304_cuf0transcript:BL91304_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000056genomeSc0000056:192604..193759 -
Properties
Property NameValue
Transcript idBL91304_cuf0
Biotypeprotein_coding