|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL91131_cuf0 >transcript:BL91131_cuf0-protein ID=transcript:BL91131_cuf0-protein|Name=transcript:BL91131_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=419bp
MCEEYGYRTANKSHISRHMRTHTGEKPYKCDQCDYSAAQKYYLDRHLAKH
TGEKPYMCGECGYRTAHKHHLSKHMRTHTGEKPYKCDQCDYSAAEKSTLD
NHLAKHAGDKPFMCGECGYRSADRGSLYRHMRTHTGEKPYKCDQCDYSAA
QKCNLDSHLAKHSGEKPLMCDECGYRTVNKSHMSRHMRTHTGEKPYKCDQ
CDYSAAEKSTLDNHLAKHTGEKPYICGECEYRTTKKSHLSEHMITHTGEK
PYKCDQCDYSAAKKSTLNSHLDKHTGEKPYMCGKRGYRTAQKLKLSIHMR
THTGEKPYKCDQCDYSAAQKSNLDRHLAKHSGEKPFMCGECGYRATQKSH
LSKHMRCHTGIKPYKCDQCDYAAAQKYTLKRHLTKHSGEKPFTCGKCGFR
TARKHNLFTHMKTHTGEKP Run BLAST on NCBI mRNA from alignment at Sc0000114:115868..117730- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL91131_cuf0 ID=transcript:BL91131_cuf0|Name=transcript:BL91131_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1863bp|location=Sequence derived from alignment at Sc0000114:115868..117730- (Branchiostoma lanceolatum)
GGCAGAGGCAGGTGATGGGTCTCCTACTGCTTTTCACCAGAGCTGTGATG
GGTCTCCTACTGGAGTTTTAGGGGACAAAACATCAGAGCAATGTAGAAGA
CCATCCAACGAAAAGCAAAGCCAGTTTGGACGAAAAGCCATCAGAACATT
CGGTTGAGAAACCCTTTATGTGTGAGGAGTACGGGTACAGGACAGCTAAC
AAGAGTCACATATCCAGACATATGAGAACCCATACTGGTGAAAAACCGTA
CAAGTGTGACCAGTGTGACTATTCTGCTGCACAGAAATATTATTTGGATC
GACATCTAGCCAAACACACCGGTGAGAAACCCTACATGTGTGGAGAGTGC
GGGTACAGGACAGCTCACAAGCATCACCTATCAAAACATATGAGAACCCA
TACTGGTGAAAAACCCTACAAATGTGACCAGTGTGACTATTCTGCTGCAG
AGAAATCCACATTGGACAACCATCTAGCCAAACATGCTGGTGACAAACCC
TTCATGTGCGGAGAGTGCGGGTACAGGTCAGCTGACAGGGGTAGCCTATA
CAGACATATGAGAACCCATACTGGTGAAAAACCCTACAAGTGTGACCAGT
GTGATTATTCTGCTGCACAGAAATGCAATTTGGACAGTCATCTAGCAAAG
CACTCTGGAGAAAAACCCTTAATGTGCGACGAGTGCGGGTACAGGACAGT
TAACAAGAGTCACATGTCCAGACACATGAGAACACATACTGGTGAAAAAC
CGTACAAGTGTGACCAGTGTGACTACTCTGCCGCAGAGAAATCCACATTG
GACAACCATCTAGCCAAACATACTGGAGAGAAACCCTACATATGTGGGGA
ATGTGAGTACAGAACAACTAAAAAGTCTCATTTATCTGAACATATGATAA
CCCACACAGGAGAAAAACCCTACAAGTGTGACCAGTGTGATTATTCTGCT
GCAAAGAAATCCACCTTAAACAGCCATCTAGACAAACACACCGGTGAGAA
ACCCTACATGTGTGGCAAGCGCGGGTACAGGACAGCTCAAAAGCTCAAGT
TATCCATACATATGAGAACTCATACAGGAGAAAAACCCTACAAATGTGAC
CAGTGTGATTATTCCGCTGCACAGAAATCCAATTTGGACCGACATCTAGC
AAAACACTCTGGAGAAAAACCATTCATGTGTGGGGAGTGCGGGTACAGAG
CAACTCAAAAGTCTCACTTATCAAAACATATGAGATGCCATACTGGCATA
AAACCCTACAAGTGTGACCAGTGCGATTATGCTGCTGCACAGAAATACAC
ATTAAAGAGACATCTAACCAAACACTCTGGAGAGAAACCATTTACGTGTG
GCAAGTGCGGGTTCAGAACAGCTCGCAAGCATAACCTATTCACACATATG
AAAACTCATACTGGTGAGAAACCCTAGTGTGAGCTGTGTGAATATGATTA
GCAGTTCGAAAATCAGCCGTTGTCCAGGACAACAGAAGTTATACAGCCAT
TCATACATGTATATGGACCTAAGGGAAATGGATTTAAGAATACTACTACG
CCAGTGTGTGAGTAATAAGCCATTTCACAGTTCTGAAATCTGAATCCTAC
ANCCTACCACATAGCGTTGCATACTTTCTTAGAAATACTTCTAATGTCAA
GAATAAGGAGGCTTTAGTACTCAGTAACAAACTTATTCTCCAGATCTGTT
GATTATAATATAGGCTATCCTGACCCCTAATTTTGCACTGACATCCTACA
AAATGTTATTTTATCTTTTAACATTGCAACAAGGCAGCACAATGCTCAAT
CCGGGCAGCATTGCTGATATCGGTGCCATATGAGTACATAACACACAATC
ATGTAATCTCCTA Coding sequence (CDS) from alignment at Sc0000114:115868..117730- >transcript:BL91131_cuf0 ID=transcript:BL91131_cuf0|Name=transcript:BL91131_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1260bp|location=Sequence derived from alignment at Sc0000114:115868..117730- (Branchiostoma lanceolatum)
ATGTGTGAGGAGTACGGGTACAGGACAGCTAACAAGAGTCACATATCCAG
ACATATGAGAACCCATACTGGTGAAAAACCGTACAAGTGTGACCAGTGTG
ACTATTCTGCTGCACAGAAATATTATTTGGATCGACATCTAGCCAAACAC
ACCGGTGAGAAACCCTACATGTGTGGAGAGTGCGGGTACAGGACAGCTCA
CAAGCATCACCTATCAAAACATATGAGAACCCATACTGGTGAAAAACCCT
ACAAATGTGACCAGTGTGACTATTCTGCTGCAGAGAAATCCACATTGGAC
AACCATCTAGCCAAACATGCTGGTGACAAACCCTTCATGTGCGGAGAGTG
CGGGTACAGGTCAGCTGACAGGGGTAGCCTATACAGACATATGAGAACCC
ATACTGGTGAAAAACCCTACAAGTGTGACCAGTGTGATTATTCTGCTGCA
CAGAAATGCAATTTGGACAGTCATCTAGCAAAGCACTCTGGAGAAAAACC
CTTAATGTGCGACGAGTGCGGGTACAGGACAGTTAACAAGAGTCACATGT
CCAGACACATGAGAACACATACTGGTGAAAAACCGTACAAGTGTGACCAG
TGTGACTACTCTGCCGCAGAGAAATCCACATTGGACAACCATCTAGCCAA
ACATACTGGAGAGAAACCCTACATATGTGGGGAATGTGAGTACAGAACAA
CTAAAAAGTCTCATTTATCTGAACATATGATAACCCACACAGGAGAAAAA
CCCTACAAGTGTGACCAGTGTGATTATTCTGCTGCAAAGAAATCCACCTT
AAACAGCCATCTAGACAAACACACCGGTGAGAAACCCTACATGTGTGGCA
AGCGCGGGTACAGGACAGCTCAAAAGCTCAAGTTATCCATACATATGAGA
ACTCATACAGGAGAAAAACCCTACAAATGTGACCAGTGTGATTATTCCGC
TGCACAGAAATCCAATTTGGACCGACATCTAGCAAAACACTCTGGAGAAA
AACCATTCATGTGTGGGGAGTGCGGGTACAGAGCAACTCAAAAGTCTCAC
TTATCAAAACATATGAGATGCCATACTGGCATAAAACCCTACAAGTGTGA
CCAGTGCGATTATGCTGCTGCACAGAAATACACATTAAAGAGACATCTAA
CCAAACACTCTGGAGAGAAACCATTTACGTGTGGCAAGTGCGGGTTCAGA
ACAGCTCGCAAGCATAACCTATTCACACATATGAAAACTCATACTGGTGA
GAAACCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000114 | genome | Sc0000114:115868..117730 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL91131_cuf0 |
| Biotype | protein_coding |
|
