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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90753_cuf1 >transcript:BL90753_cuf1-protein ID=transcript:BL90753_cuf1-protein|Name=transcript:BL90753_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=268bp
MVTRCSRKRALLSIVALVLSVVLVAHYSWNVPLSFQGQVKSKTERRRFNA
GMIGKNATLREDVELRGKAFASNDKDVSRGRLRGSCRRKSNIVFLKSHKT
ASSTVQNILMRYGLNNNLTFALPKKENFLNWPNFFHKSSVLQEHLHGDQE
RLHGNHTSYNILCHHTRFHHDNIRDLMPNDSVYVTIVRNPSDMFESIFTY
RRLDKTYHISQPNSFKAFLDSPSDFVKKYGRTEHSQNPLFYDLGYDSDQL
TSSQTIQSAIDRIDRIFS Run BLAST on NCBI mRNA from alignment at Sc0000003:1639030..1640982+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90753_cuf1 ID=transcript:BL90753_cuf1|Name=transcript:BL90753_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1953bp|location=Sequence derived from alignment at Sc0000003:1639030..1640982+ (Branchiostoma lanceolatum)
CGCCAATTCCACAAAATTCCGCAAAATCATGTACGACTACAAGACAGTTT
ATCCATACGTTTTGTTTTGTTCTAAAAGCAGACCCTTTTTTTGCAGCTAC
AGTATCAAATCACGTCACATCAGTATTCTGTACAACCCAATCAGACCCTT
CTGGTACGCTAAACCCGATTTGTTCCAGTGACCCGGGGTCACAGCAGAAG
CCTGATACCCCCGGGCCATGATCGTGATGACACACTTCCAAGGCGGCGCC
GCTGGCGTAGGAAGAAACGGTCGCAGTTATCTCATTTAAAGCGAGCCTGT
GGAAGAAGGAACTACATGCCATTGTGTGCTTGTACACTGGTTGGTAAGTT
AGTTCTGTAGAGAAGAGTAGAGTAGAGTAGAGTAGAATAAGAGTAGAGTA
GAGTTGTGTTTTGTGTAAAGCTCCAAACGTTTCCACTGATGACTACTGAT
AACGGTATATTTAGGGGAGTTGTGCCGAATTAATCTCCCTTAGCATTTTA
TCTTCCGCTTAACATCTATTCACCAATTGATGGACAATTCGTTTGAGAGA
TATTTGTGACCTATAGCGAGTGCTAACACCTCTTAGAGGTATGTACAGTT
TAGGAATGCATTATACTAGGGGAGGTAACGTTTGACGTTGCATTGCCATT
GGGGATATCTTAAGATGCATTTTTCAGGGTTGTGGATATACGTGACCTGG
CAGAATGATAAGCAAACGTTAACGTTGATCGTCAAAGGCTTATTTTTGGT
TTATCAACACAGAGAACCATTCCATACCATGCTAGAGATGTTCTTCGCGA
GGTAAAAATCTCCAGATGCCATACAAGCTCCAACCGCACGAAGGCGCTAC
TGAGTGGTGACGATCTCTACGTGGAGAAGTCAGTACGAAGATGGTAACAC
GGTGCAGCCGTAAGAGGGCGCTGTTGTCCATCGTCGCTCTCGTTCTCTCA
GTCGTCTTGGTGGCGCATTACTCATGGAATGTTCCACTGTCGTTTCAAGG
TCAAGTCAAGAGCAAAACGGAAAGGTAAGTTGTCTGGTTCCTTGAGCTTG
TCGTCTTTCTTTACTCATATGCATATGCTCACACAATGTAGAGTTCTATC
CCTCTAGCTCTCTCCTATGCTATGCTTTCTGGATTTTCGATCTATAGCTT
CCATTAAAGATCACACAAACTAGGGTAAAAGTTTACGGCCTCAATGCATT
ACACTACACATCCGCACTTGAAACTGTGAAATGGCTTACTTTGTCCGATC
TTTAAAAACCCACTTTGTCCCATATTTTCCAGACGCCGCTTCAATGCAGG
TATGATTGGAAAGAACGCCACATTGCGGGAGGACGTCGAACTGCGCGGAA
AAGCCTTCGCCTCCAACGACAAGGATGTTAGTAGAGGAAGACTTCGTGGC
AGTTGTAGGCGAAAATCTAATATAGTTTTCCTGAAGAGCCACAAAACAGC
CAGTTCTACCGTACAAAACATCCTGATGAGATACGGACTGAACAATAACC
TCACCTTTGCTCTCCCCAAAAAGGAGAACTTCCTCAACTGGCCGAACTTC
TTCCACAAGTCTTCTGTTCTTCAAGAACATCTCCATGGCGACCAAGAGCG
TCTCCATGGTAACCACACATCCTACAACATCCTCTGCCATCACACGCGGT
TTCACCACGACAACATCCGGGACCTGATGCCAAACGACTCTGTGTACGTC
ACCATTGTGAGGAACCCGTCGGACATGTTCGAATCGATTTTCACCTACAG
AAGACTCGACAAGACGTATCACATTTCTCAGCCGAACTCCTTCAAGGCGT
TTCTTGACAGTCCCTCAGACTTCGTGAAGAAATATGGCCGGACCGAACAT
TCCCAGAATCCTCTGTTCTACGATCTTGGTTACGACAGCGATCAGCTGAC
GTCATCGCAGACGATACAGTCAGCGATTGATCGAATCGATCGGATATTTT
CCG Coding sequence (CDS) from alignment at Sc0000003:1639030..1640982+ >transcript:BL90753_cuf1 ID=transcript:BL90753_cuf1|Name=transcript:BL90753_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1608bp|location=Sequence derived from alignment at Sc0000003:1639030..1640982+ (Branchiostoma lanceolatum)
ATGGTAACACGGTGCAGCCGTAAGAGGGCGCTGTTGTCCATCGTCGCTCT
CGTTCTCTCAGTCGTCTTGGTGGCGCATTACTCATGGAATGTTCCACTGT
CGTTTCAAGGTCAAGTCAAGAGCAAAACGGAAAGACGCCGCTTCAATGCA
GGTATGATTGGAAAGAACGCCACATTGCGGGAGGACGTCGAACTGCGCGG
AAAAGCCTTCGCCTCCAACGACAAGGATGTTAGTAGAGGAAGACTTCGTG
GCAGTTGTAGGCGAAAATCTAATATAGTTTTCCTGAAGAGCCACAAAACA
GCCAGTTCTACCGTACAAAACATCCTGATGAGATACGGACTGAACAATAA
CCTCACCTTTGCTCTCCCCAAAAAGGAGAACTTCCTCAACTGGCCGAACT
TCTTCCACAAGTCTTCTGTTCTTCAAGAACATCTCCATGGCGACCAAGAG
CGTCTCCATGGTAACCACACATCCTACAACATCCTCTGCCATCACACGCG
GTTTCACCACGACAACATCCGGGACCTGATGCCAAACGACTCTGTGTACG
TCACCATTGTGAGGAACCCGTCGGACATGTTCGAATCGATTTTCACCTAC
AGAAGACTCGACAAGACGTATCACATTTCTCAGCCGAACTCCTTCAAGGC
GTTTCTTGACAGTCCCTCAGACTTCGTGAAGAAATATGGCCGGACCGAAC
ATTCCCAGAATCCTCTGTTCTACGATCTTGGTTACGACAGCGATCAGCTG
ACGTCATCGCAGACGATACAGTCAGCGATTGATCGAATCGATCGGATATT
TTCCATGGTAACACGGTGCAGCCGTAAGAGGGCGCTGTTGTCCATCGTCG
CTCTCGTTCTCTCAGTCGTCTTGGTGGCGCATTACTCATGGAATGTTCCA
CTGTCGTTTCAAGGTCAAGTCAAGAGCAAAACGGAAAGACGCCGCTTCAA
TGCAGGTATGATTGGAAAGAACGCCACATTGCGGGAGGACGTCGAACTGC
GCGGAAAAGCCTTCGCCTCCAACGACAAGGATGTTAGTAGAGGAAGACTT
CGTGGCAGTTGTAGGCGAAAATCTAATATAGTTTTCCTGAAGAGCCACAA
AACAGCCAGTTCTACCGTACAAAACATCCTGATGAGATACGGACTGAACA
ATAACCTCACCTTTGCTCTCCCCAAAAAGGAGAACTTCCTCAACTGGCCG
AACTTCTTCCACAAGTCTTCTGTTCTTCAAGAACATCTCCATGGCGACCA
AGAGCGTCTCCATGGTAACCACACATCCTACAACATCCTCTGCCATCACA
CGCGGTTTCACCACGACAACATCCGGGACCTGATGCCAAACGACTCTGTG
TACGTCACCATTGTGAGGAACCCGTCGGACATGTTCGAATCGATTTTCAC
CTACAGAAGACTCGACAAGACGTATCACATTTCTCAGCCGAACTCCTTCA
AGGCGTTTCTTGACAGTCCCTCAGACTTCGTGAAGAAATATGGCCGGACC
GAACATTCCCAGAATCCTCTGTTCTACGATCTTGGTTACGACAGCGATCA
GCTGACGTCATCGCAGACGATACAGTCAGCGATTGATCGAATCGATCGGA
TATTTTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:1639030..1640982 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90753_cuf1 |
| Biotype | protein_coding |
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