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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90685_cuf0 >transcript:BL90685_cuf0-protein ID=transcript:BL90685_cuf0-protein|Name=transcript:BL90685_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=124bp
VPSPSMTFYSCAKFGLDGFFSSLRVELMKAQQDVSVTLAVLGFVATPTFC
NHLKTAPDGDKVLKRFAPMDETALAVIRGGATRAREIYYPFHTWPVAKLR
ALVPQLLDYLIVRVNRIRKTGWFS Run BLAST on NCBI mRNA from alignment at Sc0000042:1219429..1220534+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90685_cuf0 ID=transcript:BL90685_cuf0|Name=transcript:BL90685_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1106bp|location=Sequence derived from alignment at Sc0000042:1219429..1220534+ (Branchiostoma lanceolatum)
GTACCGTCTCCGAGCATGACCTTCTACAGCTGTGCGAAGTTCGGTCTGGA
CGGGTTCTTCAGCTCCCTCCGTGTGGAACTGATGAAGGCTCAGCAGGACG
TGTCCGTCACTCTCGCCGTGCTGGGTTTTGTCGCAACCCCAACATTCTGT
AACCATTTAAAAGTACGCAAAAAGTAACGTTTCACTAGCTGGGTCGCTAC
GTTAGTCAAAATTGTATATTGACTTCTTTGTGGTTAGAGGCTACTAATTC
AAGGAGAGGTACTGTTTATGGTCCGTCTATTTGTCTGTGTTTTCACAGTT
ACATATTTTCCAAATGCTATTTTCATATACCGCAACGGGTGTATACGTAG
CGCAGGAGTTGTGTTTAGGCCATTGTGTTGTTCTTTTTACTCCAGACGGC
GCCAGATGGTGACAAGGTACTGAAAAGGTTCGCCCCGATGGACGAGACTG
CCCTGGCGGTTATCCGGGGAGGTGCAACCCGCGCCCGGGAGATCTACTAT
CCTTTCCATACCTGGCCTGTTGCCAAATTGAGGGCTCTGGTGCCTCAACT
GTTGGATTACCTCATTGTCAGGGTTAATAGAATTCGGAAAACGGGATGGT
TTAGCTGATAGTTCCAAGATGGCAGACGTATGACGTCAGAAATCAACATG
GTGGCGCCCATTGCTTCAAGGGTAAAACAAAATAGGCTTTTTCTGAGAAA
AACCTGCAATGACTTCTTTGTACACATGTTGAGATTGTGTTTAAAAATTC
TCTCCAAGCAGATGTAAGGTCTTGCTTAGTGTTTTACGCGTCTAGCTTCT
CCACTCTGCCTAGGATAATCGCGAACAACCAAATTAACGTATGAAAATGC
TCAAAAGCACGCTTAAGCCACTGACCCTACATCTGCTTGGAAATCAGTTA
TGAGTTATGCCCTCGTGTTGATGTCGGGACGTCCTGGAATGTTTAACGCT
GAATCTGTCAAGGACATCTCAATTAAAGACGGCGCTTGGCCGCTATATAT
CTTAAACTTAAGGCGTCATAATTGGCCACAAGGTACTGTCGTTTCATTTT
GTTAGACCAAACAATACTAATGCATACACGAACTACATTAGGATACACGC
TTTGTC Coding sequence (CDS) from alignment at Sc0000042:1219429..1220534+ >transcript:BL90685_cuf0 ID=transcript:BL90685_cuf0|Name=transcript:BL90685_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=750bp|location=Sequence derived from alignment at Sc0000042:1219429..1220534+ (Branchiostoma lanceolatum)
GTACCGTCTCCGAGCATGACCTTCTACAGCTGTGCGAAGTTCGGTCTGGA
CGGGTTCTTCAGCTCCCTCCGTGTGGAACTGATGAAGGCTCAGCAGGACG
TGTCCGTCACTCTCGCCGTGCTGGGTTTTGTCGCAACCCCAACATTCTGT
AACCATTTAAAAACGGCGCCAGATGGTGACAAGGTACTGAAAAGGTTCGC
CCCGATGGACGAGACTGCCCTGGCGGTTATCCGGGGAGGTGCAACCCGCG
CCCGGGAGATCTACTATCCTTTCCATACCTGGCCTGTTGCCAAATTGAGG
GCTCTGGTGCCTCAACTGTTGGATTACCTCATTGTCAGGGTTAATAGAAT
TCGGAAAACGGGATGGTTTAGCTGAGTACCGTCTCCGAGCATGACCTTCT
ACAGCTGTGCGAAGTTCGGTCTGGACGGGTTCTTCAGCTCCCTCCGTGTG
GAACTGATGAAGGCTCAGCAGGACGTGTCCGTCACTCTCGCCGTGCTGGG
TTTTGTCGCAACCCCAACATTCTGTAACCATTTAAAAACGGCGCCAGATG
GTGACAAGGTACTGAAAAGGTTCGCCCCGATGGACGAGACTGCCCTGGCG
GTTATCCGGGGAGGTGCAACCCGCGCCCGGGAGATCTACTATCCTTTCCA
TACCTGGCCTGTTGCCAAATTGAGGGCTCTGGTGCCTCAACTGTTGGATT
ACCTCATTGTCAGGGTTAATAGAATTCGGAAAACGGGATGGTTTAGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1219429..1220534 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90685_cuf0 |
| Biotype | protein_coding |
|
