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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90616_cuf0 >transcript:BL90616_cuf0-protein ID=transcript:BL90616_cuf0-protein|Name=transcript:BL90616_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=157bp
SCPGAVEPVDPGPNCEPGLQFVVDNWCGVIRENFQPCNDVVDPTPYFEAC
VYDVCEYQGSLESLCQNLEAYVATCLANGVELEDWRTLTLCPTTCPVHQH
YIACGSSCPAVCTDVTAGDSCNEPCVEGCQCDQGFVLSGQDCIPEDQCGC
LTDGIYH Run BLAST on NCBI mRNA from alignment at xfSc0006049:198..1112+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90616_cuf0 ID=transcript:BL90616_cuf0|Name=transcript:BL90616_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=915bp|location=Sequence derived from alignment at xfSc0006049:198..1112+ (Branchiostoma lanceolatum)
TAGCTGTCCTGGTGCAGTGGAGCCAGTAGATCCAGGACCAAACTGTGAAC
CGGGGCTACAATTTGTAGTCGACAACTGGTGCGGCGTGATCAGGGAAAAC
TTCCAACCTTGTAACGACGTGGTCGACCCGACTCCGTACTTTGAGGCCTG
TGTCTATGACGTCTGCGAGTATCAAGGCAGCTTAGAAAGCCTCTGTCAAA
ACCTAGAGGCATACGTGGCGACCTGCCTTGCTAATGGCGTGGAACTGGAG
GACTGGAGAACTTTGACCTTGTGCCGTAAGTACATGGCCTATATTCGAGC
TCTAACCATTGAGACAGCAGCACACAAGGGGAAACAAGTCTATGTATGGG
CTTGAGTAAAGTTCTAAACGGGAACTATGCTGCTAAAGGGTATCTGAAGG
TGTTGTATGAGTGTGTATAGTTGACTTGAGGAGCGCTGTCCACTACTATT
TGCCTAGTACATGGCCTTCATGCATTATCACCTTTTCGCTCGGAGACAAA
AACTATAGGGATTGCAGTTACTGTAGTGCTATACCATACACTATGTTAAG
TGTAACATAATATCTATAATATCGTATGTCTTTGATACGTCGATGGAGTT
CTAATAGTTATTCCGGTAGTCACTGACGAGAGACAGTGGATGCTGTCTGA
AACGCCTTTTTCAGCATTTATCCAGTTGCTTGAGTAATTGTCATTTGGCC
TTTTGTGTCTTTATGCAGCGACAACCTGCCCGGTACATCAACACTACATA
GCCTGCGGCAGTTCGTGCCCAGCGGTGTGCACAGACGTGACTGCCGGAGA
CAGCTGTAATGAACCGTGTGTCGAGGGTTGCCAGTGCGACCAGGGCTTTG
TTCTGAGCGGTCAGGACTGCATTCCAGAGGACCAGTGCGGTTGTCTCACG
GATGGTATCTACCAC Coding sequence (CDS) from alignment at xfSc0006049:198..1112+ >transcript:BL90616_cuf0 ID=transcript:BL90616_cuf0|Name=transcript:BL90616_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at xfSc0006049:198..1112+ (Branchiostoma lanceolatum)
AGCTGTCCTGGTGCAGTGGAGCCAGTAGATCCAGGACCAAACTGTGAACC
GGGGCTACAATTTGTAGTCGACAACTGGTGCGGCGTGATCAGGGAAAACT
TCCAACCTTGTAACGACGTGGTCGACCCGACTCCGTACTTTGAGGCCTGT
GTCTATGACGTCTGCGAGTATCAAGGCAGCTTAGAAAGCCTCTGTCAAAA
CCTAGAGGCATACGTGGCGACCTGCCTTGCTAATGGCGTGGAACTGGAGG
ACTGGAGAACTTTGACCTTGTGCCCGACAACCTGCCCGGTACATCAACAC
TACATAGCCTGCGGCAGTTCGTGCCCAGCGGTGTGCACAGACGTGACTGC
CGGAGACAGCTGTAATGAACCGTGTGTCGAGGGTTGCCAGTGCGACCAGG
GCTTTGTTCTGAGCGGTCAGGACTGCATTCCAGAGGACCAGTGCGGTTGT
CTCACGGATGGTATCTACCACAGCTGTCCTGGTGCAGTGGAGCCAGTAGA
TCCAGGACCAAACTGTGAACCGGGGCTACAATTTGTAGTCGACAACTGGT
GCGGCGTGATCAGGGAAAACTTCCAACCTTGTAACGACGTGGTCGACCCG
ACTCCGTACTTTGAGGCCTGTGTCTATGACGTCTGCGAGTATCAAGGCAG
CTTAGAAAGCCTCTGTCAAAACCTAGAGGCATACGTGGCGACCTGCCTTG
CTAATGGCGTGGAACTGGAGGACTGGAGAACTTTGACCTTGTGCCCGACA
ACCTGCCCGGTACATCAACACTACATAGCCTGCGGCAGTTCGTGCCCAGC
GGTGTGCACAGACGTGACTGCCGGAGACAGCTGTAATGAACCGTGTGTCG
AGGGTTGCCAGTGCGACCAGGGCTTTGTTCTGAGCGGTCAGGACTGCATT
CCAGAGGACCAGTGCGGTTGTCTCACGGATGGTATCTACCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0006049 | genome | xfSc0006049:198..1112 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90616_cuf0 |
| Biotype | protein_coding |
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