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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90548_cuf0 >transcript:BL90548_cuf0-protein ID=transcript:BL90548_cuf0-protein|Name=transcript:BL90548_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=341bp
GNLRTLRLYQNQITNLPADIFVGLDNLERLDLSRNSIRSIEAGMFNDTTQ
LHTLDLEYNSISTIAANTYDLLASISTVDIDNNPWQCDCKMAPFKQRMTG
SYPFENQIICAGPGNLARQYLRDVNPEDLICEETTPVYSTLSTKHIVDST
LSLSTVSSSSPFHQSAKSTSKAQTSSPTASNKLTADPVSSSPLFGPSVKS
MSEPSASTQTPQTANPSDANPAWSKVSSDSPFAFQSTMTESNTGLTGGGI
VLSVSVVATLCVFLGMFIISAMALTVWCMYKRRKRDPNSEQNSSNSTPAG
TSSGHDQIRQPAGINSQSKMSHPGIEDSENIYNVPNDDVDT Run BLAST on NCBI mRNA from alignment at Sc0000001:1643875..1645284- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90548_cuf0 ID=transcript:BL90548_cuf0|Name=transcript:BL90548_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1410bp|location=Sequence derived from alignment at Sc0000001:1643875..1645284- (Branchiostoma lanceolatum)
TTGGTAATCTGCGGACCTTGCGTCTTTACCAGAACCAGATAACTAACCTA
CCAGCTGACATATTTGTGGGACTTGATAACCTAGAGAGGCTTGACCTTAG
CAGGAATAGCATCCGCAGTATCGAGGCAGGCATGTTCAATGACACAACAC
AGCTTCACACTCTAGATCTTGAGTACAACAGCATCAGCACCATTGCAGCC
AACACATATGACCTACTGGCCTCTATTTCAACCGTTGACATTGACAACAA
CCCCTGGCAGTGTGACTGTAAGATGGCCCCCTTTAAGCAGAGGATGACCG
GGTCCTACCCATTTGAGAACCAGATAATATGTGCTGGACCTGGTAACCTT
GCACGGCAATACTTACGGGATGTAAATCCTGAAGACCTGATCTGCGAAGA
GACCACACCAGTCTACTCCACTTTGAGCACAAAACACATTGTTGACTCTA
CTCTTAGCTTGTCTACAGTTAGCAGTTCTTCTCCTTTTCATCAGTCAGCA
AAGTCAACATCAAAGGCACAAACATCATCCCCAACAGCCAGTAACAAACT
CACTGCCGACCCAGTCAGCAGTTCCCCTCTGTTTGGTCCCTCTGTCAAGT
CAATGTCAGAGCCTTCAGCATCTACCCAAACACCCCAGACAGCAAACCCT
TCTGATGCCAACCCTGCCTGGTCTAAAGTCAGTTCTGACTCTCCTTTTGC
TTTTCAGTCGACGATGACAGAGAGCAACACTGGCCTTACTGGGGGTGGCA
TTGTCCTGTCTGTGTCTGTTGTTGCTACTCTGTGCGTTTTTCTTGGAATG
TTCATTATTTCCGCCATGGCCTTGACAGTATGGTGCATGTATAAAAGGAG
GAAAAGGGATCCTAATTCTGAGCAGAATTCTAGCAACTCAACCCCGGCAG
GCACATCCAGTGGTCATGACCAGATAAGGCAGCCTGCAGGCATAAACAGT
CAATCCAAAATGTCACATCCCGGTATAGAAGACAGTGAGAATATCTATAA
TGTTCCAAATGATGATGTTGATACATGAGTACAACACCATCGCCGAAATC
AACCAGTCAGAAAGTCCAAACAAAGGTGCAGGCAACATGCAGAGTCTTGA
CAGTTTTGGCTATCTGGTTTTGCCCCCTCCCCTTCCCCCTGAGAATCAAG
CTGGCCCTCAGGCTGGTTCCCAGAGTGAATCAGCAGATGCAGCAGCTTGC
ACAGGCGGTGGTCGTGACACATGGACAGACGAGGCAGAGTATAACGACGT
CATTAGTCCATCACAAAGACCACAACCGGCCTCAGGACAAATTCAGCATC
TCGGCAGCTTTAACGATGGTTACGAGGTTCCATCTCTTTCCCTGGGCCCA
GAGAATAGAGCCCATCCACAAGCAAGAGAAGGCCCACAGTCCCACAAATA
TGAGAACAGC Coding sequence (CDS) from alignment at Sc0000001:1643875..1645284- >transcript:BL90548_cuf0 ID=transcript:BL90548_cuf0|Name=transcript:BL90548_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000001:1643875..1645284- (Branchiostoma lanceolatum)
GGTAATCTGCGGACCTTGCGTCTTTACCAGAACCAGATAACTAACCTACC
AGCTGACATATTTGTGGGACTTGATAACCTAGAGAGGCTTGACCTTAGCA
GGAATAGCATCCGCAGTATCGAGGCAGGCATGTTCAATGACACAACACAG
CTTCACACTCTAGATCTTGAGTACAACAGCATCAGCACCATTGCAGCCAA
CACATATGACCTACTGGCCTCTATTTCAACCGTTGACATTGACAACAACC
CCTGGCAGTGTGACTGTAAGATGGCCCCCTTTAAGCAGAGGATGACCGGG
TCCTACCCATTTGAGAACCAGATAATATGTGCTGGACCTGGTAACCTTGC
ACGGCAATACTTACGGGATGTAAATCCTGAAGACCTGATCTGCGAAGAGA
CCACACCAGTCTACTCCACTTTGAGCACAAAACACATTGTTGACTCTACT
CTTAGCTTGTCTACAGTTAGCAGTTCTTCTCCTTTTCATCAGTCAGCAAA
GTCAACATCAAAGGCACAAACATCATCCCCAACAGCCAGTAACAAACTCA
CTGCCGACCCAGTCAGCAGTTCCCCTCTGTTTGGTCCCTCTGTCAAGTCA
ATGTCAGAGCCTTCAGCATCTACCCAAACACCCCAGACAGCAAACCCTTC
TGATGCCAACCCTGCCTGGTCTAAAGTCAGTTCTGACTCTCCTTTTGCTT
TTCAGTCGACGATGACAGAGAGCAACACTGGCCTTACTGGGGGTGGCATT
GTCCTGTCTGTGTCTGTTGTTGCTACTCTGTGCGTTTTTCTTGGAATGTT
CATTATTTCCGCCATGGCCTTGACAGTATGGTGCATGTATAAAAGGAGGA
AAAGGGATCCTAATTCTGAGCAGAATTCTAGCAACTCAACCCCGGCAGGC
ACATCCAGTGGTCATGACCAGATAAGGCAGCCTGCAGGCATAAACAGTCA
ATCCAAAATGTCACATCCCGGTATAGAAGACAGTGAGAATATCTATAATG
TTCCAAATGATGATGTTGATACATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:1643875..1645284 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90548_cuf0 |
| Biotype | protein_coding |
|
