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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90448_cuf0 >transcript:BL90448_cuf0-protein ID=transcript:BL90448_cuf0-protein|Name=transcript:BL90448_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=115bp
FQTTADVNGVIGHHPPRHIHFNPLCCLSPHQIFTNKEYTSFGWTFCTIHS
SGKTLLKLKYKFLHRETKFFTYSHSRLRPCLRTVSRRRLRCCRSTTWRWM
TTSWAHSRPAVLRRG Run BLAST on NCBI mRNA from alignment at Sc0000170:473134..475956- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90448_cuf0 ID=transcript:BL90448_cuf0|Name=transcript:BL90448_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2823bp|location=Sequence derived from alignment at Sc0000170:473134..475956- (Branchiostoma lanceolatum)
TTTCCAGACCACCGCGGATGTTAATGGCGTAATTGGTCATCACCCACCCA
GACACATCCATTTCAACCCATTGTGCTGTTTGTCACCCCATCAGATTTTC
ACAAATAAGGAATACACATCCTTCGGCTGGACATTCTGTACAATACACAG
CTCTGGAAAAACTCTTCTCAAACTTAAATACAAGTTTTTACATCGTGAAA
CAAAGTTCTTCACCTACAGCCACAGCCGTCTACGACCATGTCTTCGTACT
GTCTCAAGACGACGTCTCCGTTGTTGTCGAAGTACAACATGGAGATGGAT
GACCACTTCGTGGGCGCACAGCAGGCCGGCGGTACTGCGTCGGGGGTAAG
AGAGTTCACCAGAGTCTGAATGACGGCGTGGTTCGTACCGTTCAAGTGTT
CGTTGAGCGGGAAGGGGCACTCTCCGCTGCAATGGTACGCCATGTAGCCC
TGCGGTGCGATGATCCAGTCGTCCCAGCCGACGTCCTTGAACCTGATGTA
CAGCTTCCTCCGCTTGCAGATGTTGCCGGGCCCTTTGGAGGAGTCTACCG
TCCTGGCGGAGCGCTTGTCTCGGCTCTTGCACTGCTGCATGTCCGTGGAG
ATGACGAAGAGTTGCGCGTCTGTGAGGCTGAAGTGCGGACAAGACTCTAG
CCTCGTACCGTCCTCCGCCTTCACTGACTCCACGGACACCAGCAGGCCGT
GGTTGTCCTCTGCCCGTCTCTGCCAGTGTTGGACGGCGCTGGCGATGTTG
AAGACCTTGATGTCGTCTCTGTCGAACGGTGTGATGACGTGAGACTGTAG
CAGCTCAAGGGTNTGAGACTGCAGCAGCTCAAGGGTGTCCGCGCTGGCGA
CTTTGCTGGGCTGGAGGACACGGTAGACGCTGACGGTGTACGCCTTGGCC
GCAGACCAAACCCGCGGGTCGTCGGAGATGGGCACCCTGAGCTCGGCGGA
ACGGACAAACTCCTCCGCGGCGACGGCAGAAACGGAGAACGTCACGCCTC
GGCTGGAGCAGGCCGTCGGGGAAGGGTCGACGATGTCGTGATCTAAAATA
GAAATAATGAGAATAATTTAGTAAAGGTGCAAAAAAACTCAAGTATGTGA
TAGAAATAAAGACAGTGGTTTTTCGCATCAACATATAATGGGCTGCGCTC
GCCAGGGAATAAAGAAAAAAGTCATACAAACTTATCTGGACCATAATTCA
GTCATGCTAGAGCTGTTAGAAAAAATAGAGCTAGAAAACTACCACAAAAT
AGCTCAATACGACACTAAGGCAGTATTTAAAATTCATATGTAATGGAAAA
ATAAATAATAGACCTTACACGGTCTTGGGATAACACTCAATAATCATCAG
AATATTACGTATTTTTCTGATGTTACGTTCAAACTATTTGCATACGACGT
CAAGCAATTATCAACANCAGTCTTGGGATAACACTCAATAATCATCAGAA
TATTACGTATTTTTCTGCTGTTACGTTCAAACTATTTGCATACGACGTCA
AGCAATTATTAACAGTACACATAAAATGACTGTACACCAATAAAATGATC
TAAAATATCAAAATGGTACCTACATTTGCCCTTGAAATTCCTGACGATGT
TTCCCGGCACGGTGACGTCTGGGAACTGGCAGCCGGCCGGCTCTCCCGAC
GTCTGCGCCGCCCGGAGCTTCTCCTGCCGCCCGTACAGCTCCAGCATGTG
CCTGGGCACGGTCGCTCCTCTCTTGGGCCGCGGTCTGTGCGTCATCCCCA
GGGCGCGCAGCATCGCCGACTCCAGCCGGGCTATCCTCGGGTCGACGTCC
GCAGCGCCGCTCACCACAGTCGTCACGACGGTGACGAAAACGAGAACTTC
AACTCTCATGGTGTAGTAGTGGACAAGACTGAGGGGATCGCAAGAGTGGA
GGTGTGTTCACTTCGCTATCGCTCGACAAACTGATGGCCTGTTTTGCCAG
GCATCAAGATTTAATCTAAGTCCCGACTACGATATTTATGAGCACCCCTT
TGAGCCTCCCTCCGGCCGATAGCCCAATTTGCACCACTCCTCGGGACAGG
AATAATCAGACGTCGGCCGTGTTTATCATATGGACGTGCGCATTCATATG
CATATGATGTTGGTGGTAATCAACTACCAGAGGAGAAAAAACAATGACCG
CCCATTGATCGGTGGGACCGGCCGGACGGGAACAAAGGGCTGGCTTCTCG
CAATACACACCCGTCAACCCAGACAACAGGTGAGACCAGCCACCGTGATC
AAAGACCGAGACGTTCCTAAAAGTAAAAGCAGTGGCCGCAATATGACAAG
AATGAAGAAAGGTATTGAATGGGTCTGGGAAGTCCGTCAGAACCCTAATG
TTATAACAGACAACATCGAAGTGTGAAGTAAGTAATGTCCGCTAAGGAAA
ATCTACGAAAATACTACCACCGAGACGTACGTTTGTTTTATGTCAATGAT
TCTTGTCCAAGAACAACGGAACGGAAAAATAAAACCTTTCCAACAAAAAT
AAGGAAATTCACGTTTCTTTTTAGTTTATAGGGCGTGGTGCCCATGCCGC
GGGTCCTGGCGTCTTCGTGGATCAGATTGTATTTAACTATATATTATCAG
TCCCAAGCGGCAAATACGAGAATCCTACATAATCCTAGGGATCAGTTTAA
TAGTCTTGGTGCGCAGACGCCGGGCACACGAGATAGACCACCCGACCGGA
GTTAGAGGAGAAGGGGATATCGGAAATTGCTGACTACGGGGCAAAGCCCG
TGATATTTGTCGATACAAAAGGATAATCCAAAATCAAATATAGAAAAAAT
GTACGCATTTAGGACACGGTCAC Coding sequence (CDS) from alignment at Sc0000170:473134..475956- >transcript:BL90448_cuf0 ID=transcript:BL90448_cuf0|Name=transcript:BL90448_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=348bp|location=Sequence derived from alignment at Sc0000170:473134..475956- (Branchiostoma lanceolatum)
TTCCAGACCACCGCGGATGTTAATGGCGTAATTGGTCATCACCCACCCAG
ACACATCCATTTCAACCCATTGTGCTGTTTGTCACCCCATCAGATTTTCA
CAAATAAGGAATACACATCCTTCGGCTGGACATTCTGTACAATACACAGC
TCTGGAAAAACTCTTCTCAAACTTAAATACAAGTTTTTACATCGTGAAAC
AAAGTTCTTCACCTACAGCCACAGCCGTCTACGACCATGTCTTCGTACTG
TCTCAAGACGACGTCTCCGTTGTTGTCGAAGTACAACATGGAGATGGATG
ACCACTTCGTGGGCGCACAGCAGGCCGGCGGTACTGCGTCGGGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000170 | genome | Sc0000170:473134..475956 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90448_cuf0 |
| Biotype | protein_coding |
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